RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 COL23A1Q86Y22 540 aaPredicted RBP7.54□□□□□ -1.2
VAPA-207ENST00000583879 CCNL1Q9UK58 526 aaPredicted RBP7.54□□□□□ -1.2
VAPA-207ENST00000583879 ANKRD36BQ8N2N9 1353 aa7.54□□□□□ -1.2
VAPA-207ENST00000583879 CD163L1Q9NR16 1453 aa7.54□□□□□ -1.2
VAPA-207ENST00000583879 PAPPAQ13219 1627 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 YBX3P16989 372 aaKnown RBP eCLIP7.53□□□□□ -1.23e-8■■□□□ 14.1
VAPA-207ENST00000583879 FBLN1P23142 703 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 PTPREP23469 700 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 HMGB2P26583 209 aaKnown RBP7.53□□□□□ -1.2
VAPA-207ENST00000583879 HOXC9P31274 260 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 AMPHP49418 695 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 COG3Q96JB2 828 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 NHSQ6T4R5 1651 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 AKAP12Q02952 1782 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 RGPD5Q99666 1765 aa7.53□□□□□ -1.2
VAPA-207ENST00000583879 MAP3K19Q56UN5 1328 aa7.52□□□□□ -1.2
VAPA-207ENST00000583879 EDC4Q6P2E9 1401 aaKnown RBP7.52□□□□□ -1.2
VAPA-207ENST00000583879 NBPF6Q5VWK0 638 aa7.52□□□□□ -1.21
VAPA-207ENST00000583879 THSD4Q6ZMP0 1018 aa7.52□□□□□ -1.21
VAPA-207ENST00000583879 NBPF4Q96M43 638 aa7.52□□□□□ -1.21
VAPA-207ENST00000583879 WNK3Q9BYP7 1800 aa7.52□□□□□ -1.21
VAPA-207ENST00000583879 A0A1W2PP64 1363 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 NSD2O96028 1365 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 USP47Q96K76 1375 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
VAPA-207ENST00000583879 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
VAPA-207ENST00000583879 FLAD1Q8NFF5 587 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 RYDENQ9NUL5 291 aaKnown RBP7.51□□□□□ -1.21
VAPA-207ENST00000583879 CD2APQ9Y5K6 639 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 CGNL1Q0VF96 1302 aa7.51□□□□□ -1.21
VAPA-207ENST00000583879 FOSBP53539 338 aa7.5□□□□□ -1.21
VAPA-207ENST00000583879 MSL1Q68DK7 614 aa7.5□□□□□ -1.21
VAPA-207ENST00000583879 RAPGEF4Q8WZA2 1011 aa7.5□□□□□ -1.21
VAPA-207ENST00000583879 WNT2BQ93097 391 aa7.5□□□□□ -1.21
VAPA-207ENST00000583879 IRX2Q9BZI1 471 aaPredicted RBP7.5□□□□□ -1.21
VAPA-207ENST00000583879 ST20-MTHFSA0A0A6YYL1 179 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 FYB1O15117 783 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 PPP1R15BQ5SWA1 713 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 TESK2Q96S53 571 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 GPBP1L1Q9HC44 474 aaPredicted RBP7.49□□□□□ -1.21
VAPA-207ENST00000583879 BTAF1O14981 1849 aa7.49□□□□□ -1.21
VAPA-207ENST00000583879 GOLGB1Q14789 3259 aaKnown RBP7.48□□□□□ -1.21
VAPA-207ENST00000583879 TATP17735 454 aaPredicted RBP7.48□□□□□ -1.21
VAPA-207ENST00000583879 RRS1Q15050 365 aaKnown RBP7.48□□□□□ -1.21
VAPA-207ENST00000583879 MPRIPQ6WCQ1 1025 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 MON2Q7Z3U7 1717 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 USHBP1Q8N6Y0 703 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 NBPF3Q9H094 633 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 CRISPLD2Q9H0B8 497 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 CHD4Q14839 1912 aa7.48□□□□□ -1.21
VAPA-207ENST00000583879 ATP10DQ9P241 1426 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 HSPA6P17066 643 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 HSP90AB2PQ58FF8 381 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 SMARCC1Q92922 1105 aaPredicted RBP7.47□□□□□ -1.21
VAPA-207ENST00000583879 GGNBP2Q9H3C7 697 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 USP54Q70EL1 1684 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 MEGF6O75095 1541 aa7.47□□□□□ -1.21
VAPA-207ENST00000583879 PALLDQ8WX93 1383 aa7.46□□□□□ -1.21
VAPA-207ENST00000583879 CYP27B1O15528 508 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 PDE4AP27815 886 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 AMIGO3Q86WK7 504 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 ZNF526Q8TF50 670 aaPredicted RBP7.46□□□□□ -1.22
VAPA-207ENST00000583879 ZDHHC16Q969W1 377 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 AK7Q96M32 723 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 COL24A1Q17RW2 1714 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 PCDH11XQ9BZA7 1347 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 PCDH11YQ9BZA8 1340 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 RTL1A6NKG5 1358 aa7.46□□□□□ -1.22
VAPA-207ENST00000583879 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.45□□□□□ -1.22
VAPA-207ENST00000583879 EVI5O60447 810 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 PHF14O94880 888 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 NKX1-1Q15270 411 aaPredicted RBP7.45□□□□□ -1.22
VAPA-207ENST00000583879 SMIM5Q71RC9 77 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 PIGBQ92521 554 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 LTN1O94822 1766 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 IGSF1Q8N6C5 1336 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 INSRP06213 1382 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 TONSLQ96HA7 1378 aa7.45□□□□□ -1.22
VAPA-207ENST00000583879 QSER1Q2KHR3 1735 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 SSFA2P28290 1259 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 SIK1P57059 783 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 TMF1P82094 1093 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 ADAM33Q9BZ11 813 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 WWC3Q9ULE0 1092 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 ADCY9O60503 1353 aa7.44□□□□□ -1.22
VAPA-207ENST00000583879 SMG6Q86US8 1419 aaKnown RBP7.44□□□□□ -1.22
VAPA-207ENST00000583879 SPG7Q9UQ90 795 aa7.43□□□□□ -1.22
VAPA-207ENST00000583879 LY75O60449 1722 aa7.43□□□□□ -1.22
VAPA-207ENST00000583879 KIF24Q5T7B8 1368 aa7.43□□□□□ -1.22
VAPA-207ENST00000583879 CEP350Q5VT06 3117 aa7.43□□□□□ -1.22
VAPA-207ENST00000583879 KAT6BQ8WYB5 2073 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 FAM208AQ9UK61 1670 aaKnown RBP7.42□□□□□ -1.22
VAPA-207ENST00000583879 ATP6V1AP38606 617 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 TGFB2P61812 414 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 CDCA8Q53HL2 280 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 LINC00116Q8NCU8 138 aa7.42□□□□□ -1.22
VAPA-207ENST00000583879 CARD14Q9BXL6 1004 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms