RNA–Protein interactions for RNA: ENST00000583559.1

PER1-215, Transcript of period circadian regulator 1, human

TSL 2

Gene PER1, Length 523 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER1-215	ENST00000583559	LOC102724428	A0A0B4J2F2	783 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	STARD3NL	O95772	234 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	SNRPA1	P09661	255 aa	Known RBP	12.59	□□□□□ -0.39
PER1-215	ENST00000583559	ZNF853	P0CG23	659 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	YY1	P25490	414 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	SIK1	P57059	783 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	NLGN2	Q8NFZ4	835 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	TSR2	Q969E8	191 aa	Known RBP	12.59	□□□□□ -0.39
PER1-215	ENST00000583559	ZNF521	Q96K83	1311 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	MRC1	P22897	1456 aa		12.59	□□□□□ -0.39
PER1-215	ENST00000583559	SIPA1L3	O60292	1781 aa	Predicted RBP	12.58	□□□□□ -0.39
PER1-215	ENST00000583559	EIF4A1	P60842	406 aa	Known RBP	12.58	□□□□□ -0.4
PER1-215	ENST00000583559	VSIG10	Q8N0Z9	540 aa		12.58	□□□□□ -0.4
PER1-215	ENST00000583559	CDCA7L	Q96GN5	454 aa		12.58	□□□□□ -0.4
PER1-215	ENST00000583559	ZNF496	Q96IT1	587 aa	Predicted RBP	12.58	□□□□□ -0.4
PER1-215	ENST00000583559	SLC4A9	Q96Q91	983 aa		12.58	□□□□□ -0.4
PER1-215	ENST00000583559	ELL2	O00472	640 aa	Predicted RBP	12.57	□□□□□ -0.4
PER1-215	ENST00000583559	MSH5	O43196	834 aa		12.57	□□□□□ -0.4
PER1-215	ENST00000583559	KCNQ3	O43525	872 aa		12.57	□□□□□ -0.4
PER1-215	ENST00000583559	EIF2S2	P20042	333 aa	Known RBP	12.57	□□□□□ -0.4
PER1-215	ENST00000583559	POLD1	P28340	1107 aa		12.57	□□□□□ -0.4
PER1-215	ENST00000583559	KLHL34	Q8N239	644 aa		12.57	□□□□□ -0.4
PER1-215	ENST00000583559	SOS1	Q07889	1333 aa	Predicted RBP	12.57	□□□□□ -0.4
PER1-215	ENST00000583559	FANCI	Q9NVI1	1328 aa		12.57	□□□□□ -0.4
PER1-215	ENST00000583559	GOLGB1	Q14789	3259 aa	Known RBP	12.57	□□□□□ -0.4
PER1-215	ENST00000583559	PHF14	O94880	888 aa		12.56	□□□□□ -0.4
PER1-215	ENST00000583559	EXOSC9	Q06265	439 aa	Known RBP	12.56	□□□□□ -0.4
PER1-215	ENST00000583559	TWISTNB	Q3B726	338 aa	Predicted RBP	12.56	□□□□□ -0.4
PER1-215	ENST00000583559	DUSP27	Q5VZP5	1158 aa		12.56	□□□□□ -0.4
PER1-215	ENST00000583559	AK7	Q96M32	723 aa		12.56	□□□□□ -0.4
PER1-215	ENST00000583559	STK31	Q9BXU1	1019 aa		12.56	□□□□□ -0.4
PER1-215	ENST00000583559	HEG1	Q9ULI3	1381 aa		12.56	□□□□□ -0.4
PER1-215	ENST00000583559	COL5A3	P25940	1745 aa	Predicted RBP	12.55	□□□□□ -0.4
PER1-215	ENST00000583559	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.55	□□□□□ -0.4
PER1-215	ENST00000583559	GIGYF1	O75420	1035 aa	Predicted RBP	12.55	□□□□□ -0.4
PER1-215	ENST00000583559	HOXB7	P09629	217 aa		12.55	□□□□□ -0.4
PER1-215	ENST00000583559	CT47B1	P0C2W7	299 aa	Predicted RBP	12.55	□□□□□ -0.4
PER1-215	ENST00000583559	CCDC30	Q5VVM6	783 aa		12.55	□□□□□ -0.4
PER1-215	ENST00000583559	KDM3B	Q7LBC6	1761 aa		12.55	□□□□□ -0.4
PER1-215	ENST00000583559	ZNF831	Q5JPB2	1677 aa		12.54	□□□□□ -0.4
PER1-215	ENST00000583559	HDGFL1	Q5TGJ6	251 aa		12.54	□□□□□ -0.4
PER1-215	ENST00000583559	DNAJC10	Q8IXB1	793 aa		12.54	□□□□□ -0.4
PER1-215	ENST00000583559	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.54	□□□□□ -0.4
PER1-215	ENST00000583559	CIC	Q96RK0	1608 aa	Predicted RBP	12.53	□□□□□ -0.4
PER1-215	ENST00000583559	DCAF8L1	A6NGE4	600 aa		12.53	□□□□□ -0.4
PER1-215	ENST00000583559	GNPAT	O15228	680 aa		12.53	□□□□□ -0.4
PER1-215	ENST00000583559	SSFA2	P28290	1259 aa		12.53	□□□□□ -0.4
PER1-215	ENST00000583559	ZNF428	Q96B54	188 aa		12.53	□□□□□ -0.4
PER1-215	ENST00000583559	TJP1	Q07157	1748 aa		12.53	□□□□□ -0.4
PER1-215	ENST00000583559	CENPB	P07199	599 aa	Predicted RBP	12.52	□□□□□ -0.41
PER1-215	ENST00000583559	TRMT2A	Q8IZ69	625 aa	Known RBP	12.52	□□□□□ -0.41
PER1-215	ENST00000583559	C8orf58	Q8NAV2	365 aa		12.52	□□□□□ -0.41
PER1-215	ENST00000583559	FLAD1	Q8NFF5	587 aa		12.52	□□□□□ -0.41
PER1-215	ENST00000583559	NECTIN2	Q92692	538 aa		12.52	□□□□□ -0.41
PER1-215	ENST00000583559	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.52	□□□□□ -0.41
PER1-215	ENST00000583559	USP16	Q9Y5T5	823 aa		12.52	□□□□□ -0.41
PER1-215	ENST00000583559	YBX3	P16989	372 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
PER1-215	ENST00000583559	CANX	P27824	592 aa	Known RBP	12.51	□□□□□ -0.41
PER1-215	ENST00000583559	KRT24	Q2M2I5	525 aa		12.51	□□□□□ -0.41
PER1-215	ENST00000583559	CCDC87	Q9NVE4	849 aa		12.51	□□□□□ -0.41
PER1-215	ENST00000583559	RTCB	Q9Y3I0	505 aa	Known RBP	12.51	□□□□□ -0.41
PER1-215	ENST00000583559	UBR2	Q8IWV8	1755 aa		12.51	□□□□□ -0.41
PER1-215	ENST00000583559	VAMP4	O75379	141 aa		12.5	□□□□□ -0.41
PER1-215	ENST00000583559	CYP19A1	P11511	503 aa	Predicted RBP	12.5	□□□□□ -0.41
PER1-215	ENST00000583559	CRKL	P46109	303 aa	Known RBP	12.5	□□□□□ -0.41
PER1-215	ENST00000583559	RC3H1	Q5TC82	1133 aa	Known RBP	12.5	□□□□□ -0.41
PER1-215	ENST00000583559	DBF4	Q9UBU7	674 aa	Predicted RBP	12.5	□□□□□ -0.41
PER1-215	ENST00000583559	ERBB4	Q15303	1308 aa		12.5	□□□□□ -0.41
PER1-215	ENST00000583559	CNTNAP4	Q9C0A0	1308 aa		12.5	□□□□□ -0.41
PER1-215	ENST00000583559	C4A	P0C0L4	1744 aa		12.5	□□□□□ -0.41
PER1-215	ENST00000583559	KCP	Q6ZWJ8	1503 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559		A0A087WZG4	1122 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	MYL6B	P14649	208 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	GPR162	Q16538	588 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	PELP1	Q8IZL8	1130 aa	Known RBP	12.49	□□□□□ -0.41
PER1-215	ENST00000583559	TSPYL6	Q8N831	410 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	ZNF784	Q8NCA9	323 aa	Predicted RBP	12.49	□□□□□ -0.41
PER1-215	ENST00000583559	HYPK	Q9NX55	129 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	CACNA1F	O60840	1977 aa		12.49	□□□□□ -0.41
PER1-215	ENST00000583559	PRAMEF22	A3QJZ6	481 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	A1BG	P04217	495 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	SLC4A2	P04920	1241 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	ALDH1L2	Q3SY69	923 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	TRAPPC3L	Q5T215	181 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	SMC4	Q9NTJ3	1288 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	MYH14	Q7Z406	1995 aa	Known RBP	12.48	□□□□□ -0.41
PER1-215	ENST00000583559	KIAA1551	Q9HCM1	1747 aa		12.48	□□□□□ -0.41
PER1-215	ENST00000583559	TCERG1	O14776	1098 aa	Known RBP	12.47	□□□□□ -0.41
PER1-215	ENST00000583559	RPS6KA4	O75676	772 aa		12.47	□□□□□ -0.41
PER1-215	ENST00000583559	DDX58	O95786	925 aa	Known RBP	12.47	□□□□□ -0.41
PER1-215	ENST00000583559	IL6ST	P40189	918 aa	Predicted RBP	12.47	□□□□□ -0.41
PER1-215	ENST00000583559	KIF6	Q6ZMV9	814 aa		12.47	□□□□□ -0.41
PER1-215	ENST00000583559	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.47	□□□□□ -0.41
PER1-215	ENST00000583559	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.47	□□□□□ -0.41
PER1-215	ENST00000583559	CD2AP	Q9Y5K6	639 aa		12.47	□□□□□ -0.41
PER1-215	ENST00000583559	IPO8	O15397	1037 aa	Known RBP	12.46	□□□□□ -0.41
PER1-215	ENST00000583559	ZPR1	O75312	459 aa		12.46	□□□□□ -0.41
PER1-215	ENST00000583559	RFC4	P35249	363 aa		12.46	□□□□□ -0.41
PER1-215	ENST00000583559	AIMP1	Q12904	312 aa	Known RBP	12.46	□□□□□ -0.41
PER1-215	ENST00000583559	CHPF2	Q9P2E5	772 aa		12.46	□□□□□ -0.41

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