RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 F6X3S4 739 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 KCNQ3O43525 872 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 PRKAR2AP13861 404 aaKnown RBP6.91□□□□□ -1.3
CRLF3-204ENST00000583527 NUCB1Q02818 461 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 CEP85Q6P2H3 762 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 SIRT2Q8IXJ6 389 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 NECTIN2Q92692 538 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 GCC1Q96CN9 775 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 LNPKQ9C0E8 428 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 LGR6Q9HBX8 967 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.91□□□□□ -1.3
CRLF3-204ENST00000583527 CHPF2Q9P2E5 772 aa6.91□□□□□ -1.3
CRLF3-204ENST00000583527 NOP58Q9Y2X3 529 aaKnown RBP6.91□□□□□ -1.3
CRLF3-204ENST00000583527 RREB1Q92766 1687 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 SLC4A10Q6U841 1118 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 ERICH6Q7L0X2 663 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 ANKRD44Q8N8A2 993 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 IPO9Q96P70 1041 aaKnown RBP6.9□□□□□ -1.3
CRLF3-204ENST00000583527 SLC52A2Q9HAB3 445 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
CRLF3-204ENST00000583527 CYP27B1O15528 508 aa6.89□□□□□ -1.31
CRLF3-204ENST00000583527 CHD1LQ86WJ1 897 aa6.89□□□□□ -1.31
CRLF3-204ENST00000583527 LAMB2P55268 1798 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 ANXA1P04083 346 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 HSP90AB1P08238 724 aaKnown RBP6.88□□□□□ -1.31
CRLF3-204ENST00000583527 PROSER3Q2NL68 480 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 TOM1L2Q6ZVM7 507 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 IFNL2Q8IZJ0 200 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 DDRGK1Q96HY6 314 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 CARD10Q9BWT7 1032 aa6.88□□□□□ -1.31
CRLF3-204ENST00000583527 BCORQ6W2J9 1755 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 COL5A3P25940 1745 aaPredicted RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 IBTKQ9P2D0 1353 aaPredicted RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 HMMRO75330 724 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 GIGYF1O75420 1035 aaPredicted RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 GNAI2P04899 355 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 POTEIP0CG38 1075 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 EIF2S2P20042 333 aaKnown RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 BMP2KLQ5H9B9 411 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 LARP1Q6PKG0 1096 aaKnown RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 DCAF5Q96JK2 942 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 CHMP4AQ9BY43 222 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 PHAXQ9H814 394 aaKnown RBP6.87□□□□□ -1.31
CRLF3-204ENST00000583527 KAT6BQ8WYB5 2073 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 MYH3P11055 1940 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 THSD7AQ9UPZ6 1657 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 LRP5O75197 1615 aa6.87□□□□□ -1.31
CRLF3-204ENST00000583527 PRAMEF22A3QJZ6 481 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 GNAI3P08754 354 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 UBTFL1P0CB47 393 aaPredicted RBP6.86□□□□□ -1.31
CRLF3-204ENST00000583527 IL2RBP14784 551 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 ANKRD45Q5TZF3 282 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 ZNF790Q6PG37 636 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 RPAP2Q8IXW5 612 aaPredicted RBP6.86□□□□□ -1.31
CRLF3-204ENST00000583527 DNAAF4Q8WXU2 420 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 SRCIN1Q9C0H9 1055 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 STRN4Q9NRL3 753 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 DBF4Q9UBU7 674 aaPredicted RBP6.86□□□□□ -1.31
CRLF3-204ENST00000583527 LRRFIP2Q9Y608 721 aaKnown RBP6.86□□□□□ -1.31
CRLF3-204ENST00000583527 SCN7AQ01118 1682 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 SLIT2O94813 1529 aa6.86□□□□□ -1.31
CRLF3-204ENST00000583527 CASZ1Q86V15 1759 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 NHSQ6T4R5 1651 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 GSPT1P15170 499 aaKnown RBP6.85□□□□□ -1.31
CRLF3-204ENST00000583527 SLC39A6Q13433 755 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 TTC5Q8N0Z6 440 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 ZCRB1Q8TBF4 217 aaKnown RBP6.85□□□□□ -1.31
CRLF3-204ENST00000583527 ZNF496Q96IT1 587 aaPredicted RBP6.85□□□□□ -1.31
CRLF3-204ENST00000583527 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 ANP32EQ9BTT0 268 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 DCTPP1Q9H773 170 aa6.85□□□□□ -1.31
CRLF3-204ENST00000583527 UPF2Q9HAU5 1272 aaKnown RBP6.85□□□□□ -1.31
CRLF3-204ENST00000583527 DDX21Q9NR30 783 aaKnown RBP eCLIP6.85□□□□□ -1.31
CRLF3-204ENST00000583527 ZNF831Q5JPB2 1677 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 ERBB4Q15303 1308 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 PI4KAP2A4QPH2 592 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 SEC24BO95487 1268 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 MFAP1P55081 439 aaKnown RBP6.84□□□□□ -1.31
CRLF3-204ENST00000583527 CABP4P57796 275 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 BEND3Q5T5X7 828 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 TTC22Q5TAA0 569 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 PI4KAP1Q8N8J0 262 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 OTUD7AQ8TE49 926 aaPredicted RBP6.84□□□□□ -1.31
CRLF3-204ENST00000583527 FMNL2Q96PY5 1086 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 HYPKQ9NX55 129 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 MAP3K2Q9Y2U5 619 aa6.84□□□□□ -1.31
CRLF3-204ENST00000583527 SALL3Q9BXA9 1300 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 PNMA6EA0A0J9YXQ4 647 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 APBB1O00213 710 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 SMARCA5O60264 1052 aaPredicted RBP6.83□□□□□ -1.32
CRLF3-204ENST00000583527 CDC45O75419 566 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 ALDH1L1O75891 902 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 DDX58O95786 925 aaKnown RBP6.83□□□□□ -1.32
CRLF3-204ENST00000583527 SNRPA1P09661 255 aaKnown RBP6.83□□□□□ -1.32
CRLF3-204ENST00000583527 PDIA6Q15084 440 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 NKX1-1Q15270 411 aaPredicted RBP6.83□□□□□ -1.32
CRLF3-204ENST00000583527 NFATC2IPQ8NCF5 419 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 USP44Q9H0E7 712 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 BTG4Q9NY30 223 aa6.83□□□□□ -1.32
CRLF3-204ENST00000583527 ZBTB47Q9UFB7 747 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms