RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 CNTNAP4Q9C0A0 1308 aa10.75□□□□□ -0.69
KPNB1-213ENST00000583013 C4AP0C0L4 1744 aa10.75□□□□□ -0.69
KPNB1-213ENST00000583013 HTATSF1O43719 755 aaKnown RBP10.74□□□□□ -0.69
KPNB1-213ENST00000583013 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
KPNB1-213ENST00000583013 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
KPNB1-213ENST00000583013 PTCD1O75127 700 aaKnown RBP10.73□□□□□ -0.69
KPNB1-213ENST00000583013 NEFMP07197 916 aa10.73□□□□□ -0.69
KPNB1-213ENST00000583013 TEFQ10587 303 aa10.73□□□□□ -0.69
KPNB1-213ENST00000583013 AMIGO3Q86WK7 504 aa10.73□□□□□ -0.69
KPNB1-213ENST00000583013 VSIG10Q8N0Z9 540 aa10.73□□□□□ -0.69
KPNB1-213ENST00000583013 PPP1R1BQ9UD71 204 aaPredicted RBP10.73□□□□□ -0.69
KPNB1-213ENST00000583013 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
KPNB1-213ENST00000583013 GNPATO15228 680 aa10.72□□□□□ -0.69
KPNB1-213ENST00000583013 SLC39A6Q13433 755 aa10.72□□□□□ -0.69
KPNB1-213ENST00000583013 RTF1Q92541 710 aaKnown RBP10.72□□□□□ -0.69
KPNB1-213ENST00000583013 MAPK8IP3Q9UPT6 1336 aa10.72□□□□□ -0.69
KPNB1-213ENST00000583013 KDM3BQ7LBC6 1761 aa10.72□□□□□ -0.69
KPNB1-213ENST00000583013 EVX2Q03828 476 aa10.71□□□□□ -0.69
KPNB1-213ENST00000583013 NFE2L2Q16236 605 aa10.71□□□□□ -0.69
KPNB1-213ENST00000583013 ZNF790Q6PG37 636 aa10.71□□□□□ -0.69
KPNB1-213ENST00000583013 TTC5Q8N0Z6 440 aa10.71□□□□□ -0.69
KPNB1-213ENST00000583013 ARXQ96QS3 562 aa10.71□□□□□ -0.69
KPNB1-213ENST00000583013 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
KPNB1-213ENST00000583013 HEG1Q9ULI3 1381 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 RPS6KA4O75676 772 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 PHF14O94880 888 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 POLD1P28340 1107 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 CRKLP46109 303 aaKnown RBP10.7□□□□□ -0.7
KPNB1-213ENST00000583013 MCM10Q7L590 875 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 RTCBQ9Y3I0 505 aaKnown RBP10.7□□□□□ -0.7
KPNB1-213ENST00000583013 LAMB4A4D0S4 1761 aa10.7□□□□□ -0.7
KPNB1-213ENST00000583013 BTBD11A6QL63 1104 aa10.69□□□□□ -0.7
KPNB1-213ENST00000583013 CYP19A1P11511 503 aaPredicted RBP10.69□□□□□ -0.7
KPNB1-213ENST00000583013 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
KPNB1-213ENST00000583013 WDR43Q15061 677 aaKnown RBP eCLIP10.69□□□□□ -0.7
KPNB1-213ENST00000583013 ZNF496Q96IT1 587 aaPredicted RBP10.69□□□□□ -0.7
KPNB1-213ENST00000583013 DCTN1Q14203 1278 aa10.68□□□□□ -0.7
KPNB1-213ENST00000583013 TRAPPC3LQ5T215 181 aa10.68□□□□□ -0.7
KPNB1-213ENST00000583013 INTS5Q6P9B9 1019 aaKnown RBP10.68□□□□□ -0.7
KPNB1-213ENST00000583013 SMIM5Q71RC9 77 aa10.68□□□□□ -0.7
KPNB1-213ENST00000583013 FMNL2Q96PY5 1086 aa10.68□□□□□ -0.7
KPNB1-213ENST00000583013 FHDC1Q9C0D6 1143 aaPredicted RBP10.68□□□□□ -0.7
KPNB1-213ENST00000583013 CCDC87Q9NVE4 849 aa10.68□□□□□ -0.7
KPNB1-213ENST00000583013 SOS1Q07889 1333 aaPredicted RBP10.67□□□□□ -0.7
KPNB1-213ENST00000583013 TAF7Q15545 349 aaPredicted RBP10.67□□□□□ -0.7
KPNB1-213ENST00000583013 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
KPNB1-213ENST00000583013 KLHL34Q8N239 644 aa10.67□□□□□ -0.7
KPNB1-213ENST00000583013 ARHGEF1Q92888 912 aaKnown RBP10.67□□□□□ -0.7
KPNB1-213ENST00000583013 RUNDC1Q96C34 613 aa10.67□□□□□ -0.7
KPNB1-213ENST00000583013 TEX13AQ9BXU3 409 aaPredicted RBP10.67□□□□□ -0.7
KPNB1-213ENST00000583013 ADAMTS8Q9UP79 889 aa10.67□□□□□ -0.7
KPNB1-213ENST00000583013 SCN7AQ01118 1682 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 KCNQ3O43525 872 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 STARD3NLO95772 234 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 TMPOP42166 694 aaKnown RBP10.66□□□□□ -0.7
KPNB1-213ENST00000583013 LMOD3Q0VAK6 560 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
KPNB1-213ENST00000583013 SYT17Q9BSW7 474 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 ZBTB1Q9Y2K1 713 aa10.66□□□□□ -0.7
KPNB1-213ENST00000583013 COL15A1P39059 1388 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 KIF13BQ9NQT8 1826 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 USP42Q9H9J4 1324 aaKnown RBP10.65□□□□□ -0.7
KPNB1-213ENST00000583013 ANP32CO43423 234 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 RFC4P35249 363 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 RIPK4P57078 832 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
KPNB1-213ENST00000583013 BCORQ6W2J9 1755 aa10.65□□□□□ -0.71
KPNB1-213ENST00000583013 GYS1P13807 737 aa10.64□□□□□ -0.71
KPNB1-213ENST00000583013 NLGN1Q8N2Q7 840 aa10.64□□□□□ -0.71
KPNB1-213ENST00000583013 THUMPD2Q9BTF0 503 aaKnown RBP10.64□□□□□ -0.71
KPNB1-213ENST00000583013 SNRPA1P09661 255 aaKnown RBP10.63□□□□□ -0.71
KPNB1-213ENST00000583013 EIF5P55010 431 aaKnown RBP10.63□□□□□ -0.71
KPNB1-213ENST00000583013 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
KPNB1-213ENST00000583013 IFNLR1Q8IU57 520 aaPredicted RBP10.63□□□□□ -0.71
KPNB1-213ENST00000583013 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
KPNB1-213ENST00000583013 CD2APQ9Y5K6 639 aa10.63□□□□□ -0.71
KPNB1-213ENST00000583013 KIAA1551Q9HCM1 1747 aa10.63□□□□□ -0.71
KPNB1-213ENST00000583013 GOLGB1Q14789 3259 aaKnown RBP10.63□□□□□ -0.71
KPNB1-213ENST00000583013 NRXN2Q9P2S2 1712 aa10.62□□□□□ -0.71
KPNB1-213ENST00000583013 MMP10P09238 476 aa10.62□□□□□ -0.71
KPNB1-213ENST00000583013 IL6STP40189 918 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-213ENST00000583013 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
KPNB1-213ENST00000583013 MIS18AQ9NYP9 233 aa10.62□□□□□ -0.71
KPNB1-213ENST00000583013 SRP68Q9UHB9 627 aaKnown RBP10.62□□□□□ -0.71
KPNB1-213ENST00000583013 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
KPNB1-213ENST00000583013 TRIM35Q9UPQ4 493 aa10.62□□□□□ -0.71
KPNB1-213ENST00000583013 RRP7AQ9Y3A4 280 aaKnown RBP10.62□□□□□ -0.71
KPNB1-213ENST00000583013 C10orf71Q711Q0 1435 aa10.61□□□□□ -0.71
KPNB1-213ENST00000583013 A0A087WZG4 1122 aa10.61□□□□□ -0.71
KPNB1-213ENST00000583013 PRAMEF22A3QJZ6 481 aa10.61□□□□□ -0.71
KPNB1-213ENST00000583013 CANXP27824 592 aaKnown RBP10.61□□□□□ -0.71
KPNB1-213ENST00000583013 EIF4A1P60842 406 aaKnown RBP10.61□□□□□ -0.71
KPNB1-213ENST00000583013 USP16Q9Y5T5 823 aa10.61□□□□□ -0.71
KPNB1-213ENST00000583013 ZPR1O75312 459 aa10.6□□□□□ -0.71
KPNB1-213ENST00000583013 GIGYF1O75420 1035 aaPredicted RBP10.6□□□□□ -0.71
KPNB1-213ENST00000583013 A1BGP04217 495 aa10.6□□□□□ -0.71
KPNB1-213ENST00000583013 NUBP1P53384 320 aa10.6□□□□□ -0.71
KPNB1-213ENST00000583013 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
KPNB1-213ENST00000583013 USPL1Q5W0Q7 1092 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms