RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 VSIG10Q8N0Z9 540 aa13.28□□□□□ -0.28
CACNB1-211ENST00000582877 ZNF496Q96IT1 587 aaPredicted RBP13.28□□□□□ -0.28
CACNB1-211ENST00000582877 NRXN2Q9P2S2 1712 aa13.27□□□□□ -0.28
CACNB1-211ENST00000582877 KCNQ3O43525 872 aa13.27□□□□□ -0.29
CACNB1-211ENST00000582877 DCTN1Q14203 1278 aa13.27□□□□□ -0.29
CACNB1-211ENST00000582877 FKBP8Q14318 412 aa13.27□□□□□ -0.29
CACNB1-211ENST00000582877 BTBD11A6QL63 1104 aa13.26□□□□□ -0.29
CACNB1-211ENST00000582877 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
CACNB1-211ENST00000582877 DDR1Q08345 913 aa13.26□□□□□ -0.29
CACNB1-211ENST00000582877 USPL1Q5W0Q7 1092 aa13.26□□□□□ -0.29
CACNB1-211ENST00000582877 RTF1Q92541 710 aaKnown RBP13.26□□□□□ -0.29
CACNB1-211ENST00000582877 PARP3Q9Y6F1 533 aa13.26□□□□□ -0.29
CACNB1-211ENST00000582877 ARFGEF1Q9Y6D6 1849 aa13.25□□□□□ -0.29
CACNB1-211ENST00000582877 DLEC1Q9Y238 1755 aa13.25□□□□□ -0.29
CACNB1-211ENST00000582877 ZNF784Q8NCA9 323 aaPredicted RBP13.25□□□□□ -0.29
CACNB1-211ENST00000582877 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
CACNB1-211ENST00000582877 GOLGB1Q14789 3259 aaKnown RBP13.25□□□□□ -0.29
CACNB1-211ENST00000582877 GRIN3BO60391 1043 aa13.24□□□□□ -0.29
CACNB1-211ENST00000582877 ZPR1O75312 459 aa13.24□□□□□ -0.29
CACNB1-211ENST00000582877 RALBP1Q15311 655 aa13.24□□□□□ -0.29
CACNB1-211ENST00000582877 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
CACNB1-211ENST00000582877 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
CACNB1-211ENST00000582877 STARD3NLO95772 234 aa13.23□□□□□ -0.29
CACNB1-211ENST00000582877 PLEKHF1Q96S99 279 aa13.23□□□□□ -0.29
CACNB1-211ENST00000582877 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
CACNB1-211ENST00000582877 ZNF330Q9Y3S2 320 aaPredicted RBP13.23□□□□□ -0.29
CACNB1-211ENST00000582877 ANKRD31Q8N7Z5 1873 aa13.23□□□□□ -0.29
CACNB1-211ENST00000582877 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
CACNB1-211ENST00000582877 PRAMEF22A3QJZ6 481 aa13.22□□□□□ -0.29
CACNB1-211ENST00000582877 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
CACNB1-211ENST00000582877 NEFMP07197 916 aa13.22□□□□□ -0.29
CACNB1-211ENST00000582877 BCL2L12Q9HB09 334 aa13.22□□□□□ -0.29
CACNB1-211ENST00000582877 A0A0G2JLW4 131 aa13.21□□□□□ -0.29
CACNB1-211ENST00000582877 DPEP1P16444 411 aa13.21□□□□□ -0.29
CACNB1-211ENST00000582877 EIF5P55010 431 aaKnown RBP13.21□□□□□ -0.29
CACNB1-211ENST00000582877 TGFB2P61812 414 aa13.21□□□□□ -0.29
CACNB1-211ENST00000582877 NFE2L2Q16236 605 aa13.21□□□□□ -0.29
CACNB1-211ENST00000582877 TEX13AQ9BXU3 409 aaPredicted RBP13.21□□□□□ -0.29
CACNB1-211ENST00000582877 COL11A2P13942 1736 aaPredicted RBP13.21□□□□□ -0.3
CACNB1-211ENST00000582877 A1BGP04217 495 aa13.2□□□□□ -0.3
CACNB1-211ENST00000582877 TM4SF1P30408 202 aa13.2□□□□□ -0.3
CACNB1-211ENST00000582877 PIP4K2AP48426 406 aaPredicted RBP13.2□□□□□ -0.3
CACNB1-211ENST00000582877 NFIXQ14938 502 aa13.2□□□□□ -0.3
CACNB1-211ENST00000582877 THUMPD2Q9BTF0 503 aaKnown RBP13.2□□□□□ -0.3
CACNB1-211ENST00000582877 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
CACNB1-211ENST00000582877 CACNA1SQ13698 1873 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
CACNB1-211ENST00000582877 MIS18AQ9NYP9 233 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 BCS1LQ9Y276 419 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 USP16Q9Y5T5 823 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 ATP10DQ9P241 1426 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 ADCY9O60503 1353 aa13.19□□□□□ -0.3
CACNB1-211ENST00000582877 A0A087WZG4 1122 aa13.18□□□□□ -0.3
CACNB1-211ENST00000582877 TAF7Q15545 349 aaPredicted RBP13.18□□□□□ -0.3
CACNB1-211ENST00000582877 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
CACNB1-211ENST00000582877 TBC1D2BQ9UPU7 963 aa13.18□□□□□ -0.3
CACNB1-211ENST00000582877 SNRPA1P09661 255 aaKnown RBP13.17□□□□□ -0.3
CACNB1-211ENST00000582877 KCNA3P22001 575 aa13.17□□□□□ -0.3
CACNB1-211ENST00000582877 CHRNA5P30532 468 aa13.17□□□□□ -0.3
CACNB1-211ENST00000582877 TBC1D9BQ66K14 1250 aa13.17□□□□□ -0.3
CACNB1-211ENST00000582877 PNNQ9H307 717 aaKnown RBP13.17□□□□□ -0.3
CACNB1-211ENST00000582877 CAMTA2O94983 1202 aa13.16□□□□□ -0.3
CACNB1-211ENST00000582877 SERPINB2P05120 415 aa13.16□□□□□ -0.3
CACNB1-211ENST00000582877 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
CACNB1-211ENST00000582877 SBF1O95248 1867 aa13.15□□□□□ -0.3
CACNB1-211ENST00000582877 NPM2Q86SE8 214 aaKnown RBP13.15□□□□□ -0.3
CACNB1-211ENST00000582877 DZIP3Q86Y13 1208 aaKnown RBP13.15□□□□□ -0.3
CACNB1-211ENST00000582877 PNISRQ8TF01 805 aaKnown RBP13.15□□□□□ -0.3
CACNB1-211ENST00000582877 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
CACNB1-211ENST00000582877 NUP98P52948 1817 aa13.15□□□□□ -0.3
CACNB1-211ENST00000582877 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.31
CACNB1-211ENST00000582877 NBPF26B4DH59 902 aa13.14□□□□□ -0.31
CACNB1-211ENST00000582877 RIPK4P57078 832 aa13.14□□□□□ -0.31
CACNB1-211ENST00000582877 WDR43Q15061 677 aaKnown RBP eCLIP13.14□□□□□ -0.31
CACNB1-211ENST00000582877 NBPF10Q6P3W6 841 aaKnown RBP13.14□□□□□ -0.31
CACNB1-211ENST00000582877 NBPF15Q8N660 670 aa13.14□□□□□ -0.31
CACNB1-211ENST00000582877 PIM2Q9P1W9 311 aa13.14□□□□□ -0.31
CACNB1-211ENST00000582877 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
CACNB1-211ENST00000582877 TMPOP42166 694 aaKnown RBP13.13□□□□□ -0.31
CACNB1-211ENST00000582877 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
CACNB1-211ENST00000582877 CCDC24Q8N4L8 307 aa13.13□□□□□ -0.31
CACNB1-211ENST00000582877 TIAM2Q8IVF5 1701 aa13.13□□□□□ -0.31
CACNB1-211ENST00000582877 CCDC88AQ3V6T2 1871 aa13.12□□□□□ -0.31
CACNB1-211ENST00000582877 ZEB1P37275 1124 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-211ENST00000582877 DALRD3Q5D0E6 543 aaKnown RBP13.12□□□□□ -0.31
CACNB1-211ENST00000582877 PRR5LQ6MZQ0 368 aa13.12□□□□□ -0.31
CACNB1-211ENST00000582877 ARHGAP27Q6ZUM4 889 aa13.12□□□□□ -0.31
CACNB1-211ENST00000582877 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
CACNB1-211ENST00000582877 TSPYL4Q9UJ04 414 aa13.12□□□□□ -0.31
CACNB1-211ENST00000582877 TNRC6CQ9HCJ0 1690 aaKnown RBP13.12□□□□□ -0.31
CACNB1-211ENST00000582877 GIGYF1O75420 1035 aaPredicted RBP13.11□□□□□ -0.31
CACNB1-211ENST00000582877 NEUROD2Q15784 382 aa13.11□□□□□ -0.31
CACNB1-211ENST00000582877 C2CD5Q86YS7 1000 aa13.11□□□□□ -0.31
CACNB1-211ENST00000582877 ANKRD36CQ5JPF3 1778 aa13.1□□□□□ -0.31
CACNB1-211ENST00000582877 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
CACNB1-211ENST00000582877 CNBD1Q8NA66 436 aa13.1□□□□□ -0.31
CACNB1-211ENST00000582877 RUNDC1Q96C34 613 aa13.1□□□□□ -0.31
CACNB1-211ENST00000582877 ADAMTS8Q9UP79 889 aa13.1□□□□□ -0.31
CACNB1-211ENST00000582877 FER1L6Q2WGJ9 1857 aa13.09□□□□□ -0.31
CACNB1-211ENST00000582877 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 1124.4 ms