RNA–Protein interactions for RNA: ENST00000582671.1

LIMS2-218, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 4

Gene LIMS2, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-218ENST00000582671 FMNL2Q96PY5 1086 aa24.82■■□□□ 1.56
LIMS2-218ENST00000582671 MAPK8IP3Q9UPT6 1336 aa24.82■■□□□ 1.56
LIMS2-218ENST00000582671 N4BP2Q86UW6 1770 aaPredicted RBP24.81■■□□□ 1.56
LIMS2-218ENST00000582671 CANXP27824 592 aaKnown RBP24.8■■□□□ 1.56
LIMS2-218ENST00000582671 THUMPD2Q9BTF0 503 aaKnown RBP24.8■■□□□ 1.56
LIMS2-218ENST00000582671 COL15A1P39059 1388 aa24.8■■□□□ 1.56
LIMS2-218ENST00000582671 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
LIMS2-218ENST00000582671 STARD3NLO95772 234 aa24.79■■□□□ 1.56
LIMS2-218ENST00000582671 FKBP8Q14318 412 aa24.79■■□□□ 1.56
LIMS2-218ENST00000582671 TAF7Q15545 349 aaPredicted RBP24.79■■□□□ 1.56
LIMS2-218ENST00000582671 MIS18AQ9NYP9 233 aa24.79■■□□□ 1.56
LIMS2-218ENST00000582671 AFDNP55196 1824 aaKnown RBP24.79■■□□□ 1.56
LIMS2-218ENST00000582671 LAMB4A4D0S4 1761 aa24.78■■□□□ 1.56
LIMS2-218ENST00000582671 PRAMEF22A3QJZ6 481 aa24.78■■□□□ 1.56
LIMS2-218ENST00000582671 GPR162Q16538 588 aa24.78■■□□□ 1.56
LIMS2-218ENST00000582671 USPL1Q5W0Q7 1092 aa24.78■■□□□ 1.56
LIMS2-218ENST00000582671 TEX13AQ9BXU3 409 aaPredicted RBP24.78■■□□□ 1.56
LIMS2-218ENST00000582671 CCDC146Q8IYE0 955 aa24.77■■□□□ 1.56
LIMS2-218ENST00000582671 PELP1Q8IZL8 1130 aaKnown RBP24.77■■□□□ 1.56
LIMS2-218ENST00000582671 USP16Q9Y5T5 823 aa24.77■■□□□ 1.56
LIMS2-218ENST00000582671 EIF5P55010 431 aaKnown RBP24.76■■□□□ 1.55
LIMS2-218ENST00000582671 NARFQ9UHQ1 456 aa24.76■■□□□ 1.55
LIMS2-218ENST00000582671 SCN7AQ01118 1682 aa24.75■■□□□ 1.55
LIMS2-218ENST00000582671 A1BGP04217 495 aa24.75■■□□□ 1.55
LIMS2-218ENST00000582671 YBX3P16989 372 aaKnown RBP eCLIP24.75■■□□□ 1.55
LIMS2-218ENST00000582671 BRCA1P38398 1863 aaKnown RBP24.75■■□□□ 1.55
LIMS2-218ENST00000582671 ZPR1O75312 459 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 TMPOP42166 694 aaKnown RBP24.74■■□□□ 1.55
LIMS2-218ENST00000582671 RIPK4P57078 832 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 DDR1Q08345 913 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 BCL2L12Q9HB09 334 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 ADAMTS8Q9UP79 889 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 C10orf71Q711Q0 1435 aa24.74■■□□□ 1.55
LIMS2-218ENST00000582671 BCORQ6W2J9 1755 aa24.73■■□□□ 1.55
LIMS2-218ENST00000582671 YY1P25490 414 aa24.73■■□□□ 1.55
LIMS2-218ENST00000582671 WDR43Q15061 677 aaKnown RBP eCLIP24.73■■□□□ 1.55
LIMS2-218ENST00000582671 PARP3Q9Y6F1 533 aa24.73■■□□□ 1.55
LIMS2-218ENST00000582671 NRXN2Q9P2S2 1712 aa24.72■■□□□ 1.55
LIMS2-218ENST00000582671 SNRPA1P09661 255 aaKnown RBP24.72■■□□□ 1.55
LIMS2-218ENST00000582671 TM4SF1P30408 202 aa24.72■■□□□ 1.55
LIMS2-218ENST00000582671 RRP7AQ9Y3A4 280 aaKnown RBP24.72■■□□□ 1.55
LIMS2-218ENST00000582671 IL6STP40189 918 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-218ENST00000582671 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
LIMS2-218ENST00000582671 PXDNLA1KZ92 1463 aa24.7■■□□□ 1.55
LIMS2-218ENST00000582671 PNISRQ8TF01 805 aaKnown RBP24.7■■□□□ 1.54
LIMS2-218ENST00000582671 RUNDC1Q96C34 613 aa24.7■■□□□ 1.54
LIMS2-218ENST00000582671 WWC3Q9ULE0 1092 aa24.7■■□□□ 1.54
LIMS2-218ENST00000582671 POLRMTO00411 1230 aaKnown RBP24.69■■□□□ 1.54
LIMS2-218ENST00000582671 CCDC184Q52MB2 194 aa24.69■■□□□ 1.54
LIMS2-218ENST00000582671 ZNF330Q9Y3S2 320 aaPredicted RBP24.69■■□□□ 1.54
LIMS2-218ENST00000582671 A0A087WZG4 1122 aa24.68■■□□□ 1.54
LIMS2-218ENST00000582671 NFIXQ14938 502 aa24.68■■□□□ 1.54
LIMS2-218ENST00000582671 TBC1D2BQ9UPU7 963 aa24.68■■□□□ 1.54
LIMS2-218ENST00000582671 EIF4A1P60842 406 aaKnown RBP24.67■■□□□ 1.54
LIMS2-218ENST00000582671 NEUROD2Q15784 382 aa24.67■■□□□ 1.54
LIMS2-218ENST00000582671 UTRNP46939 3433 aa24.66■■□□□ 1.54
LIMS2-218ENST00000582671 NBPF26B4DH59 902 aa24.66■■□□□ 1.54
LIMS2-218ENST00000582671 NBPF10Q6P3W6 841 aaKnown RBP24.66■■□□□ 1.54
LIMS2-218ENST00000582671 NBPF15Q8N660 670 aa24.66■■□□□ 1.54
LIMS2-218ENST00000582671 A0A0G2JLW4 131 aa24.65■■□□□ 1.54
LIMS2-218ENST00000582671 TGFB2P61812 414 aa24.65■■□□□ 1.54
LIMS2-218ENST00000582671 TRIM35Q9UPQ4 493 aa24.65■■□□□ 1.54
LIMS2-218ENST00000582671 GIGYF1O75420 1035 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-218ENST00000582671 GRIN3BO60391 1043 aa24.63■■□□□ 1.53
LIMS2-218ENST00000582671 DPEP1P16444 411 aa24.63■■□□□ 1.53
LIMS2-218ENST00000582671 LMOD3Q0VAK6 560 aa24.63■■□□□ 1.53
LIMS2-218ENST00000582671 ANKRD31Q8N7Z5 1873 aa24.63■■□□□ 1.53
LIMS2-218ENST00000582671 CAMTA2O94983 1202 aa24.62■■□□□ 1.53
LIMS2-218ENST00000582671 TBC1D9BQ66K14 1250 aa24.62■■□□□ 1.53
LIMS2-218ENST00000582671 BICDL1Q6ZP65 573 aa24.62■■□□□ 1.53
LIMS2-218ENST00000582671 ARFGEF1Q9Y6D6 1849 aa24.62■■□□□ 1.53
LIMS2-218ENST00000582671 DLEC1Q9Y238 1755 aa24.62■■□□□ 1.53
LIMS2-218ENST00000582671 SERPINB2P05120 415 aa24.61■■□□□ 1.53
LIMS2-218ENST00000582671 DZIP3Q86Y13 1208 aaKnown RBP24.61■■□□□ 1.53
LIMS2-218ENST00000582671 TSPYL4Q9UJ04 414 aa24.61■■□□□ 1.53
LIMS2-218ENST00000582671 KCNA3P22001 575 aa24.6■■□□□ 1.53
LIMS2-218ENST00000582671 NUP98P52948 1817 aa24.6■■□□□ 1.53
LIMS2-218ENST00000582671 GOLGB1Q14789 3259 aaKnown RBP24.59■■□□□ 1.53
LIMS2-218ENST00000582671 NPM2Q86SE8 214 aaKnown RBP24.58■■□□□ 1.53
LIMS2-218ENST00000582671 BABAM1Q9NWV8 329 aa24.58■■□□□ 1.53
LIMS2-218ENST00000582671 CARMIL3Q8ND23 1372 aa24.57■■□□□ 1.52
LIMS2-218ENST00000582671 APAF1O14727 1248 aa24.57■■□□□ 1.52
LIMS2-218ENST00000582671 CHRNA5P30532 468 aa24.56■■□□□ 1.52
LIMS2-218ENST00000582671 ANP32CO43423 234 aa24.55■■□□□ 1.52
LIMS2-218ENST00000582671 BCS1LQ9Y276 419 aa24.55■■□□□ 1.52
LIMS2-218ENST00000582671 CHL1O00533 1208 aa24.54■■□□□ 1.52
LIMS2-218ENST00000582671 COL11A2P13942 1736 aaPredicted RBP24.54■■□□□ 1.52
LIMS2-218ENST00000582671 NGEFQ8N5V2 710 aa24.53■■□□□ 1.52
LIMS2-218ENST00000582671 ZNF784Q8NCA9 323 aaPredicted RBP24.53■■□□□ 1.52
LIMS2-218ENST00000582671 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
LIMS2-218ENST00000582671 MYL6BP14649 208 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 HLFQ16534 295 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 KRT24Q2M2I5 525 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 PRR5LQ6MZQ0 368 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 CLEC4GQ6UXB4 293 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 CCDC24Q8N4L8 307 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 SETDB2Q96T68 719 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 PIM2Q9P1W9 311 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 CACNA1SQ13698 1873 aa24.51■■□□□ 1.51
LIMS2-218ENST00000582671 MRS2Q9HD23 443 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms