RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 MAP7D1Q3KQU3 841 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 FAM182BQ5T319 152 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 FIGNL1Q6PIW4 674 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 RRAGCQ9HB90 399 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 USP3Q9Y6I4 520 aa8.81□□□□□ -1
SMCHD1-206ENST00000581631 TNP2Q05952 138 aa8.8□□□□□ -1
SMCHD1-206ENST00000581631 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
SMCHD1-206ENST00000581631 GNB5O14775 395 aa8.79□□□□□ -1
SMCHD1-206ENST00000581631 GRIN2CQ14957 1233 aa8.79□□□□□ -1
SMCHD1-206ENST00000581631 GDPD2Q9HCC8 539 aa8.79□□□□□ -1
SMCHD1-206ENST00000581631 NEURL1BA8MQ27 555 aa8.78□□□□□ -1
SMCHD1-206ENST00000581631 ATXN7O15265 892 aaPredicted RBP8.78□□□□□ -1
SMCHD1-206ENST00000581631 SLC24A1O60721 1099 aa8.78□□□□□ -1
SMCHD1-206ENST00000581631 MAPTP10636 758 aaKnown RBP8.78□□□□□ -1
SMCHD1-206ENST00000581631 FCHSD1Q86WN1 690 aa8.78□□□□□ -1
SMCHD1-206ENST00000581631 PRM3Q9NNZ6 103 aa8.78□□□□□ -1
SMCHD1-206ENST00000581631 AVENQ9NQS1 362 aaPredicted RBP8.78□□□□□ -1
SMCHD1-206ENST00000581631 A0A1W2PNR3 127 aa8.77□□□□□ -1.01
SMCHD1-206ENST00000581631 CDK2AP1O14519 115 aa8.77□□□□□ -1.01
SMCHD1-206ENST00000581631 ZIC5Q96T25 663 aa8.77□□□□□ -1.01
SMCHD1-206ENST00000581631 ZDHHC3Q9NYG2 299 aa8.77□□□□□ -1.01
SMCHD1-206ENST00000581631 PCDHGA11Q9Y5H2 935 aa8.77□□□□□ -1.01
SMCHD1-206ENST00000581631 DCDC2BA2VCK2 349 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 C1QTNF9BB2RNN3 333 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 FAM157BP0CG42 384 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 AMPD1P23109 780 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 CHSY3Q70JA7 882 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 CD163Q86VB7 1156 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 MDFIQ99750 246 aa8.76□□□□□ -1.01
SMCHD1-206ENST00000581631 A6NJY4 79 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 EFSO43281 561 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 FURINP09958 794 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 CD33P20138 364 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 ADH6P28332 368 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 CHRNA4P43681 627 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 WASHC4Q2M389 1173 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 SERTAD1Q9UHV2 236 aa8.75□□□□□ -1.01
SMCHD1-206ENST00000581631 PIK3CDO00329 1044 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 PIK3R2O00459 728 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 ITGB7P26010 798 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 SOX11P35716 441 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 ABL2P42684 1182 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 AIDAQ96BJ3 306 aa8.74□□□□□ -1.01
SMCHD1-206ENST00000581631 MCM6Q14566 821 aa8.73□□□□□ -1.01
SMCHD1-206ENST00000581631 NBPF1Q3BBV0 1214 aa8.73□□□□□ -1.01
SMCHD1-206ENST00000581631 ZNF468Q5VIY5 522 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-206ENST00000581631 STRN4Q9NRL3 753 aa8.73□□□□□ -1.01
SMCHD1-206ENST00000581631 KHNYNO15037 678 aaKnown RBP8.72□□□□□ -1.01
SMCHD1-206ENST00000581631 ZDHHC1Q8WTX9 485 aa8.72□□□□□ -1.01
SMCHD1-206ENST00000581631 TRIM11Q96F44 468 aa8.72□□□□□ -1.01
SMCHD1-206ENST00000581631 EPHA4P54764 986 aa8.71□□□□□ -1.02
SMCHD1-206ENST00000581631 C7orf43Q8WVR3 580 aa8.71□□□□□ -1.02
SMCHD1-206ENST00000581631 NOP53Q9NZM5 478 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-206ENST00000581631 TATP17735 454 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 TXLNAP40222 546 aa8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 SEMA3FQ13275 785 aa8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 ARSJQ5FYB0 599 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 Q8N3U1 123 aa8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 SCHIP1Q9P0W5 487 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-206ENST00000581631 LAMC2Q13753 1193 aa8.69□□□□□ -1.02
SMCHD1-206ENST00000581631 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
SMCHD1-206ENST00000581631 EML1O00423 815 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 PCBP4P57723 403 aaKnown RBP8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 ALG2Q9H553 416 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 MARK1Q9P0L2 795 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 COG6Q9Y2V7 657 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 PARP3Q9Y6F1 533 aa8.68□□□□□ -1.02
SMCHD1-206ENST00000581631 TEAD4Q15561 434 aa8.67□□□□□ -1.02
SMCHD1-206ENST00000581631 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
SMCHD1-206ENST00000581631 EML3Q32P44 896 aa8.66□□□□□ -1.02
SMCHD1-206ENST00000581631 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.66□□□□□ -1.02
SMCHD1-206ENST00000581631 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
SMCHD1-206ENST00000581631 BACH1O14867 736 aa8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 GTF2IP78347 998 aa8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 COL9A3Q14050 684 aaPredicted RBP8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 TPRNQ4KMQ1 711 aa8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 KRTAP4-8Q9BYQ9 185 aa8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
SMCHD1-206ENST00000581631 ELOA3CA0A087WX78 387 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 ELOA3DA6NLF2 546 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 SKIP12755 728 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 NCOA4Q13772 614 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 ELOA3BQ3SY89 546 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 POTEAQ6S8J7 498 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 ELOA3Q8NG57 546 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 L3MBTL2Q969R5 705 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 PLVAPQ9BX97 442 aa8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
SMCHD1-206ENST00000581631 ADARB2-AS1A8MUL3 147 aa8.63□□□□□ -1.03
SMCHD1-206ENST00000581631 SPATA31C1P0DKV0 1188 aa8.63□□□□□ -1.03
SMCHD1-206ENST00000581631 NOS2P35228 1153 aa8.63□□□□□ -1.03
SMCHD1-206ENST00000581631 SYT9Q86SS6 491 aa8.63□□□□□ -1.03
SMCHD1-206ENST00000581631 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
SMCHD1-206ENST00000581631 SIN3BO75182 1162 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 DOC2BQ14184 412 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 SH3PXD2AQ5TCZ1 1133 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 BICDL1Q6ZP65 573 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms