RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 COL15A1P39059 1388 aa26.62■■□□□ 1.85
SMG8-204ENST00000580498 MCM10Q7L590 875 aa26.62■■□□□ 1.85
SMG8-204ENST00000580498 ZBTB1Q9Y2K1 713 aa26.61■■□□□ 1.85
SMG8-204ENST00000580498 CANXP27824 592 aaKnown RBP26.6■■□□□ 1.85
SMG8-204ENST00000580498 PNISRQ8TF01 805 aaKnown RBP26.6■■□□□ 1.85
SMG8-204ENST00000580498 TGFB2P61812 414 aa26.59■■□□□ 1.85
SMG8-204ENST00000580498 SRP68Q9UHB9 627 aaKnown RBP26.59■■□□□ 1.85
SMG8-204ENST00000580498 WDR43Q15061 677 aaKnown RBP eCLIP26.58■■□□□ 1.85
SMG8-204ENST00000580498 NFE2L2Q16236 605 aa26.58■■□□□ 1.85
SMG8-204ENST00000580498 NARFQ9UHQ1 456 aa26.58■■□□□ 1.85
SMG8-204ENST00000580498 TAF7Q15545 349 aaPredicted RBP26.57■■□□□ 1.84
SMG8-204ENST00000580498 USPL1Q5W0Q7 1092 aa26.57■■□□□ 1.84
SMG8-204ENST00000580498 ZNF330Q9Y3S2 320 aaPredicted RBP26.57■■□□□ 1.84
SMG8-204ENST00000580498 FKBP8Q14318 412 aa26.56■■□□□ 1.84
SMG8-204ENST00000580498 SNRPA1P09661 255 aaKnown RBP26.55■■□□□ 1.84
SMG8-204ENST00000580498 LMOD3Q0VAK6 560 aa26.55■■□□□ 1.84
SMG8-204ENST00000580498 DCTN1Q14203 1278 aa26.55■■□□□ 1.84
SMG8-204ENST00000580498 IL6STP40189 918 aaPredicted RBP26.54■■□□□ 1.84
SMG8-204ENST00000580498 PLEKHF1Q96S99 279 aa26.54■■□□□ 1.84
SMG8-204ENST00000580498 C10orf71Q711Q0 1435 aa26.54■■□□□ 1.84
SMG8-204ENST00000580498 YBX3P16989 372 aaKnown RBP eCLIP26.53■■□□□ 1.84
SMG8-204ENST00000580498 EIF5P55010 431 aaKnown RBP26.52■■□□□ 1.84
SMG8-204ENST00000580498 DLG5Q8TDM6 1919 aa26.52■■□□□ 1.84
SMG8-204ENST00000580498 KIF13BQ9NQT8 1826 aa26.52■■□□□ 1.84
SMG8-204ENST00000580498 KCNQ3O43525 872 aa26.49■■□□□ 1.83
SMG8-204ENST00000580498 PXDNLA1KZ92 1463 aa26.48■■□□□ 1.83
SMG8-204ENST00000580498 POLRMTO00411 1230 aaKnown RBP26.47■■□□□ 1.83
SMG8-204ENST00000580498 TM4SF1P30408 202 aa26.47■■□□□ 1.83
SMG8-204ENST00000580498 RIPK4P57078 832 aa26.47■■□□□ 1.83
SMG8-204ENST00000580498 PRKRIP1Q9H875 184 aaPredicted RBP26.47■■□□□ 1.83
SMG8-204ENST00000580498 WWC3Q9ULE0 1092 aa26.47■■□□□ 1.83
SMG8-204ENST00000580498 A0A0G2JLW4 131 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 NPHP1O15259 732 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 A1BGP04217 495 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 DDR1Q08345 913 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 NFIXQ14938 502 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 ZNF784Q8NCA9 323 aaPredicted RBP26.46■■□□□ 1.83
SMG8-204ENST00000580498 BCS1LQ9Y276 419 aa26.46■■□□□ 1.83
SMG8-204ENST00000580498 ZNF652Q9Y2D9 606 aa26.45■■□□□ 1.82
SMG8-204ENST00000580498 N4BP2Q86UW6 1770 aaPredicted RBP26.44■■□□□ 1.82
SMG8-204ENST00000580498 DPEP1P16444 411 aa26.44■■□□□ 1.82
SMG8-204ENST00000580498 PIM2Q9P1W9 311 aa26.44■■□□□ 1.82
SMG8-204ENST00000580498 TBC1D2BQ9UPU7 963 aa26.44■■□□□ 1.82
SMG8-204ENST00000580498 USP16Q9Y5T5 823 aa26.44■■□□□ 1.82
SMG8-204ENST00000580498 SERPINB2P05120 415 aa26.43■■□□□ 1.82
SMG8-204ENST00000580498 BICDL1Q6ZP65 573 aa26.43■■□□□ 1.82
SMG8-204ENST00000580498 DZIP3Q86Y13 1208 aaKnown RBP26.43■■□□□ 1.82
SMG8-204ENST00000580498 RUNDC1Q96C34 613 aa26.43■■□□□ 1.82
SMG8-204ENST00000580498 TMPOP42166 694 aaKnown RBP26.41■■□□□ 1.82
SMG8-204ENST00000580498 SETDB2Q96T68 719 aa26.41■■□□□ 1.82
SMG8-204ENST00000580498 MIS18AQ9NYP9 233 aa26.41■■□□□ 1.82
SMG8-204ENST00000580498 TSPYL4Q9UJ04 414 aa26.41■■□□□ 1.82
SMG8-204ENST00000580498 SCN7AQ01118 1682 aa26.41■■□□□ 1.82
SMG8-204ENST00000580498 DALRD3Q5D0E6 543 aaKnown RBP26.4■■□□□ 1.82
SMG8-204ENST00000580498 BABAM1Q9NWV8 329 aa26.4■■□□□ 1.82
SMG8-204ENST00000580498 PDZRN3Q9UPQ7 1066 aa26.4■■□□□ 1.82
SMG8-204ENST00000580498 CARMIL3Q8ND23 1372 aa26.4■■□□□ 1.82
SMG8-204ENST00000580498 LAMB4A4D0S4 1761 aa26.39■■□□□ 1.82
SMG8-204ENST00000580498 KDM3BQ7LBC6 1761 aa26.39■■□□□ 1.82
SMG8-204ENST00000580498 THUMPD2Q9BTF0 503 aaKnown RBP26.39■■□□□ 1.82
SMG8-204ENST00000580498 BCL2L12Q9HB09 334 aa26.39■■□□□ 1.82
SMG8-204ENST00000580498 NEUROD2Q15784 382 aa26.38■■□□□ 1.81
SMG8-204ENST00000580498 CCDC146Q8IYE0 955 aa26.38■■□□□ 1.81
SMG8-204ENST00000580498 AFDNP55196 1824 aaKnown RBP26.37■■□□□ 1.81
SMG8-204ENST00000580498 KIAA1551Q9HCM1 1747 aa26.37■■□□□ 1.81
SMG8-204ENST00000580498 CLEC4GQ6UXB4 293 aa26.37■■□□□ 1.81
SMG8-204ENST00000580498 PRAMEF22A3QJZ6 481 aa26.36■■□□□ 1.81
SMG8-204ENST00000580498 RGL2O15211 777 aa26.36■■□□□ 1.81
SMG8-204ENST00000580498 EIF4A1P60842 406 aaKnown RBP26.36■■□□□ 1.81
SMG8-204ENST00000580498 TBC1D9BQ66K14 1250 aa26.36■■□□□ 1.81
SMG8-204ENST00000580498 ARHGAP27Q6ZUM4 889 aa26.36■■□□□ 1.81
SMG8-204ENST00000580498 ZNF316A6NFI3 1004 aaPredicted RBP26.35■■□□□ 1.81
SMG8-204ENST00000580498 H0YIN7 160 aa26.35■■□□□ 1.81
SMG8-204ENST00000580498 GIGYF1O75420 1035 aaPredicted RBP26.35■■□□□ 1.81
SMG8-204ENST00000580498 CAMTA2O94983 1202 aa26.35■■□□□ 1.81
SMG8-204ENST00000580498 ST5P78524 1137 aa26.35■■□□□ 1.81
SMG8-204ENST00000580498 UTRNP46939 3433 aa26.35■■□□□ 1.81
SMG8-204ENST00000580498 NRXN2Q9P2S2 1712 aa26.34■■□□□ 1.81
SMG8-204ENST00000580498 PDE6BP35913 854 aa26.34■■□□□ 1.81
SMG8-204ENST00000580498 CNBD1Q8NA66 436 aa26.34■■□□□ 1.81
SMG8-204ENST00000580498 ADAMTS8Q9UP79 889 aa26.34■■□□□ 1.81
SMG8-204ENST00000580498 PIP4K2AP48426 406 aaPredicted RBP26.33■■□□□ 1.81
SMG8-204ENST00000580498 KIF6Q6ZMV9 814 aa26.33■■□□□ 1.81
SMG8-204ENST00000580498 RRP7AQ9Y3A4 280 aaKnown RBP26.33■■□□□ 1.81
SMG8-204ENST00000580498 BRCA1P38398 1863 aaKnown RBP26.33■■□□□ 1.81
SMG8-204ENST00000580498 BCORQ6W2J9 1755 aa26.33■■□□□ 1.8
SMG8-204ENST00000580498 CHRNA5P30532 468 aa26.32■■□□□ 1.8
SMG8-204ENST00000580498 ERBB4Q15303 1308 aa26.32■■□□□ 1.8
SMG8-204ENST00000580498 GOLGB1Q14789 3259 aaKnown RBP26.32■■□□□ 1.8
SMG8-204ENST00000580498 ARFGEF1Q9Y6D6 1849 aa26.32■■□□□ 1.8
SMG8-204ENST00000580498 C2CD5Q86YS7 1000 aa26.31■■□□□ 1.8
SMG8-204ENST00000580498 BRIP1Q9BX63 1249 aa26.31■■□□□ 1.8
SMG8-204ENST00000580498 ANP32CO43423 234 aa26.3■■□□□ 1.8
SMG8-204ENST00000580498 KCNA3P22001 575 aa26.3■■□□□ 1.8
SMG8-204ENST00000580498 CALD1Q05682 793 aaKnown RBP26.3■■□□□ 1.8
SMG8-204ENST00000580498 NBPF5PQ86XG9 351 aaPredicted RBP26.3■■□□□ 1.8
SMG8-204ENST00000580498 TTLL6Q8N841 843 aa26.29■■□□□ 1.8
SMG8-204ENST00000580498 GPBP1L1Q9HC44 474 aaPredicted RBP26.29■■□□□ 1.8
SMG8-204ENST00000580498 LAS1LQ9Y4W2 734 aaKnown RBP26.29■■□□□ 1.8
SMG8-204ENST00000580498 ATP10DQ9P241 1426 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms