RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
CSNK1D-213ENST00000580446 PAXIP1Q6ZW49 1069 aaPredicted RBP19.94■□□□□ 0.78
CSNK1D-213ENST00000580446 ABT1Q9ULW3 272 aaKnown RBP19.94■□□□□ 0.78
CSNK1D-213ENST00000580446 RASSF10A6NK89 507 aa19.93■□□□□ 0.78
CSNK1D-213ENST00000580446 C21orf2O43822 256 aa19.93■□□□□ 0.78
CSNK1D-213ENST00000580446 CLEC11AQ9Y240 323 aa19.93■□□□□ 0.78
CSNK1D-213ENST00000580446 PDE4DIPQ5VU43 2346 aa19.93■□□□□ 0.78
CSNK1D-213ENST00000580446 COL5A3P25940 1745 aaPredicted RBP19.93■□□□□ 0.78
CSNK1D-213ENST00000580446 TAF1DQ9H5J8 278 aaPredicted RBP19.92■□□□□ 0.78
CSNK1D-213ENST00000580446 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 NFIXQ14938 502 aa19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 MAP1SQ66K74 1059 aaPredicted RBP19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 EMILIN1Q9Y6C2 1016 aa19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 MYH14Q7Z406 1995 aaKnown RBP19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 FLT4P35916 1363 aa19.91■□□□□ 0.78
CSNK1D-213ENST00000580446 FMR1Q06787 632 aaKnown RBP eCLIP19.9■□□□□ 0.78
CSNK1D-213ENST00000580446 IFNL2Q8IZJ0 200 aa19.9■□□□□ 0.78
CSNK1D-213ENST00000580446 FYB1O15117 783 aa19.89■□□□□ 0.77
CSNK1D-213ENST00000580446 SOX10P56693 466 aa19.89■□□□□ 0.77
CSNK1D-213ENST00000580446 CCDC24Q8N4L8 307 aa19.89■□□□□ 0.77
CSNK1D-213ENST00000580446 PPM1GO15355 546 aaPredicted RBP19.88■□□□□ 0.77
CSNK1D-213ENST00000580446 CYP4F22Q6NT55 531 aa19.88■□□□□ 0.77
CSNK1D-213ENST00000580446 ZNF622Q969S3 477 aaKnown RBP eCLIP19.88■□□□□ 0.779e-8■□□□□ 10
CSNK1D-213ENST00000580446 BEGAINQ9BUH8 593 aa19.88■□□□□ 0.77
CSNK1D-213ENST00000580446 CAPNS2Q96L46 248 aa19.87■□□□□ 0.77
CSNK1D-213ENST00000580446 H0YIN7 160 aa19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 AOC2O75106 756 aa19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 ZPR1O75312 459 aa19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 SERPINB2P05120 415 aa19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 DGKZQ13574 1117 aa19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 INTS5Q6P9B9 1019 aaKnown RBP19.86■□□□□ 0.77
CSNK1D-213ENST00000580446 IQCA1LA6NCM1 817 aa19.85■□□□□ 0.77
CSNK1D-213ENST00000580446 CNTROBQ8N137 903 aa19.85■□□□□ 0.77
CSNK1D-213ENST00000580446 SIN3AQ96ST3 1273 aa19.85■□□□□ 0.77
CSNK1D-213ENST00000580446 EYA1Q99502 592 aa19.85■□□□□ 0.77
CSNK1D-213ENST00000580446 NCAPD2Q15021 1401 aa19.85■□□□□ 0.77
CSNK1D-213ENST00000580446 ZNF541Q9H0D2 1346 aa19.84■□□□□ 0.77
CSNK1D-213ENST00000580446 BICDL1Q6ZP65 573 aa19.84■□□□□ 0.77
CSNK1D-213ENST00000580446 TAOK3Q9H2K8 898 aa19.84■□□□□ 0.77
CSNK1D-213ENST00000580446 GPR101Q96P66 508 aaPredicted RBP19.83■□□□□ 0.77
CSNK1D-213ENST00000580446 CARD11Q9BXL7 1154 aa19.83■□□□□ 0.77
CSNK1D-213ENST00000580446 DLEC1Q9Y238 1755 aa19.83■□□□□ 0.76
CSNK1D-213ENST00000580446 LTBP1Q14766 1721 aa19.82■□□□□ 0.76
CSNK1D-213ENST00000580446 ADAMTS7Q9UKP4 1686 aa19.81■□□□□ 0.76
CSNK1D-213ENST00000580446 CABP4P57796 275 aa19.81■□□□□ 0.76
CSNK1D-213ENST00000580446 L3MBTL3Q96JM7 780 aaPredicted RBP19.81■□□□□ 0.76
CSNK1D-213ENST00000580446 BCL2L12Q9HB09 334 aa19.81■□□□□ 0.76
CSNK1D-213ENST00000580446 AFDNP55196 1824 aaKnown RBP19.81■□□□□ 0.76
CSNK1D-213ENST00000580446 RNF123Q5XPI4 1314 aa19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 EPHX2P34913 555 aa19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 NEUROD1Q13562 356 aa19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 PRPF38BQ5VTL8 546 aaKnown RBP19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 ZNF831Q5JPB2 1677 aa19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 TONSLQ96HA7 1378 aa19.8■□□□□ 0.76
CSNK1D-213ENST00000580446 ERVV-2B6SEH9 535 aa19.79■□□□□ 0.76
CSNK1D-213ENST00000580446 DNAJC10Q8IXB1 793 aa19.79■□□□□ 0.76
CSNK1D-213ENST00000580446 HACL1Q9UJ83 578 aa19.79■□□□□ 0.76
CSNK1D-213ENST00000580446 SOS1Q07889 1333 aaPredicted RBP19.78■□□□□ 0.76
CSNK1D-213ENST00000580446 THSD7BQ9C0I4 1608 aa19.78■□□□□ 0.76
CSNK1D-213ENST00000580446 DDX21Q9NR30 783 aaKnown RBP eCLIP19.78■□□□□ 0.766e-8■■□□□ 13.9
CSNK1D-213ENST00000580446 TJP1Q07157 1748 aa19.78■□□□□ 0.76
CSNK1D-213ENST00000580446 TRAF5O00463 557 aa19.76■□□□□ 0.75
CSNK1D-213ENST00000580446 NRXN2Q9P2S2 1712 aa19.76■□□□□ 0.75
CSNK1D-213ENST00000580446 LTBP3Q9NS15 1303 aa19.76■□□□□ 0.75
CSNK1D-213ENST00000580446 ADAMTSL1Q8N6G6 1762 aa19.75■□□□□ 0.75
CSNK1D-213ENST00000580446 NARFQ9UHQ1 456 aa19.75■□□□□ 0.75
CSNK1D-213ENST00000580446 COL11A2P13942 1736 aaPredicted RBP19.74■□□□□ 0.75
CSNK1D-213ENST00000580446 FER1L6Q2WGJ9 1857 aa19.74■□□□□ 0.75
CSNK1D-213ENST00000580446 ECE1P42892 770 aa19.74■□□□□ 0.75
CSNK1D-213ENST00000580446 NFATC2IPQ8NCF5 419 aa19.74■□□□□ 0.75
CSNK1D-213ENST00000580446 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
CSNK1D-213ENST00000580446 COL15A1P39059 1388 aa19.73■□□□□ 0.75
CSNK1D-213ENST00000580446 PRPF40BQ6NWY9 871 aaKnown RBP19.73■□□□□ 0.75
CSNK1D-213ENST00000580446 ZNF530Q6P9A1 599 aaPredicted RBP19.73■□□□□ 0.75
CSNK1D-213ENST00000580446 ZNF277Q9NRM2 450 aaPredicted RBP19.73■□□□□ 0.75
CSNK1D-213ENST00000580446 KIF24Q5T7B8 1368 aa19.72■□□□□ 0.75
CSNK1D-213ENST00000580446 OLFM4Q6UX06 510 aa19.72■□□□□ 0.75
CSNK1D-213ENST00000580446 ZBTB1Q9Y2K1 713 aa19.72■□□□□ 0.75
CSNK1D-213ENST00000580446 CST9Q5W186 159 aa19.71■□□□□ 0.75
CSNK1D-213ENST00000580446 PUS7Q96PZ0 661 aaKnown RBP19.71■□□□□ 0.75
CSNK1D-213ENST00000580446 CASP8AP2Q9UKL3 1982 aa19.71■□□□□ 0.75
CSNK1D-213ENST00000580446 SCN4AP35499 1836 aa19.7■□□□□ 0.74
CSNK1D-213ENST00000580446 TESK2Q96S53 571 aa19.7■□□□□ 0.74
CSNK1D-213ENST00000580446 ANKRD31Q8N7Z5 1873 aa19.69■□□□□ 0.74
CSNK1D-213ENST00000580446 TBC1D9BQ66K14 1250 aa19.69■□□□□ 0.74
CSNK1D-213ENST00000580446 PRR5LQ6MZQ0 368 aa19.69■□□□□ 0.74
CSNK1D-213ENST00000580446 PNMA8AQ86V59 439 aaPredicted RBP19.69■□□□□ 0.74
CSNK1D-213ENST00000580446 ST20-MTHFSA0A0A6YYL1 179 aa19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 CYP19A1P11511 503 aaPredicted RBP19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 MTHFSP49914 203 aa19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 EIF4A2Q14240 407 aaKnown RBP19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 CIAPIN1Q6FI81 312 aa19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 ZIC5Q96T25 663 aa19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 WASHC2AQ641Q2 1341 aa19.68■□□□□ 0.74
CSNK1D-213ENST00000580446 HSP90AB1P08238 724 aaKnown RBP19.67■□□□□ 0.74
CSNK1D-213ENST00000580446 CANXP27824 592 aaKnown RBP19.67■□□□□ 0.74
CSNK1D-213ENST00000580446 PDE6BP35913 854 aa19.67■□□□□ 0.74
CSNK1D-213ENST00000580446 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
CSNK1D-213ENST00000580446 TLL2Q9Y6L7 1015 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms