RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-208ENST00000579814 MYH14Q7Z406 1995 aaKnown RBP34.6■■■■□ 3.13
LIMD2-208ENST00000579814 PELP1Q8IZL8 1130 aaKnown RBP34.6■■■■□ 3.13
LIMD2-208ENST00000579814 PARP3Q9Y6F1 533 aa34.6■■■■□ 3.13
LIMD2-208ENST00000579814 PNISRQ8TF01 805 aaKnown RBP34.59■■■■□ 3.13
LIMD2-208ENST00000579814 SNRPA1P09661 255 aaKnown RBP34.57■■■■□ 3.12
LIMD2-208ENST00000579814 RIPK4P57078 832 aa34.57■■■■□ 3.12
LIMD2-208ENST00000579814 FKBP8Q14318 412 aa34.57■■■■□ 3.12
LIMD2-208ENST00000579814 NARFQ9UHQ1 456 aa34.57■■■■□ 3.12
LIMD2-208ENST00000579814 VIRMAQ69YN4 1812 aaKnown RBP34.57■■■■□ 3.12
LIMD2-208ENST00000579814 USPL1Q5W0Q7 1092 aa34.56■■■■□ 3.12
LIMD2-208ENST00000579814 MIS18AQ9NYP9 233 aa34.56■■■■□ 3.12
LIMD2-208ENST00000579814 COL15A1P39059 1388 aa34.55■■■■□ 3.12
LIMD2-208ENST00000579814 A0A087WZG4 1122 aa34.55■■■■□ 3.12
LIMD2-208ENST00000579814 YY1P25490 414 aa34.55■■■■□ 3.12
LIMD2-208ENST00000579814 EIF5P55010 431 aaKnown RBP34.55■■■■□ 3.12
LIMD2-208ENST00000579814 TMPOP42166 694 aaKnown RBP34.54■■■■□ 3.12
LIMD2-208ENST00000579814 NPM2Q86SE8 214 aaKnown RBP34.54■■■■□ 3.12
LIMD2-208ENST00000579814 THUMPD2Q9BTF0 503 aaKnown RBP34.54■■■■□ 3.12
LIMD2-208ENST00000579814 ADAMTS8Q9UP79 889 aa34.54■■■■□ 3.12
LIMD2-208ENST00000579814 CCDC146Q8IYE0 955 aa34.53■■■■□ 3.12
LIMD2-208ENST00000579814 USP16Q9Y5T5 823 aa34.53■■■■□ 3.12
LIMD2-208ENST00000579814 UBR2Q8IWV8 1755 aa34.52■■■■□ 3.12
LIMD2-208ENST00000579814 A1BGP04217 495 aa34.52■■■■□ 3.12
LIMD2-208ENST00000579814 IL6STP40189 918 aaPredicted RBP34.52■■■■□ 3.12
LIMD2-208ENST00000579814 LMOD3Q0VAK6 560 aa34.52■■■■□ 3.12
LIMD2-208ENST00000579814 RUNDC1Q96C34 613 aa34.52■■■■□ 3.12
LIMD2-208ENST00000579814 SIPA1L3O60292 1781 aaPredicted RBP34.51■■■■□ 3.12
LIMD2-208ENST00000579814 ZNF330Q9Y3S2 320 aaPredicted RBP34.5■■■■□ 3.11
LIMD2-208ENST00000579814 GRIN3BO60391 1043 aa34.49■■■■□ 3.11
LIMD2-208ENST00000579814 PRAMEF22A3QJZ6 481 aa34.48■■■■□ 3.11
LIMD2-208ENST00000579814 TM4SF1P30408 202 aa34.48■■■■□ 3.11
LIMD2-208ENST00000579814 TGFB2P61812 414 aa34.47■■■■□ 3.11
LIMD2-208ENST00000579814 DDR1Q08345 913 aa34.46■■■■□ 3.11
LIMD2-208ENST00000579814 NEUROD2Q15784 382 aa34.46■■■■□ 3.11
LIMD2-208ENST00000579814 RRP7AQ9Y3A4 280 aaKnown RBP34.46■■■■□ 3.11
LIMD2-208ENST00000579814 YBX3P16989 372 aaKnown RBP eCLIP34.45■■■■□ 3.11
LIMD2-208ENST00000579814 BCL2L12Q9HB09 334 aa34.44■■■■□ 3.1
LIMD2-208ENST00000579814 TBC1D2BQ9UPU7 963 aa34.44■■■■□ 3.1
LIMD2-208ENST00000579814 POLRMTO00411 1230 aaKnown RBP34.43■■■■□ 3.1
LIMD2-208ENST00000579814 NFIXQ14938 502 aa34.43■■■■□ 3.1
LIMD2-208ENST00000579814 EIF4A1P60842 406 aaKnown RBP34.42■■■■□ 3.1
LIMD2-208ENST00000579814 TSPYL4Q9UJ04 414 aa34.42■■■■□ 3.1
LIMD2-208ENST00000579814 C4AP0C0L4 1744 aa34.41■■■■□ 3.1
LIMD2-208ENST00000579814 ANP32CO43423 234 aa34.4■■■■□ 3.1
LIMD2-208ENST00000579814 GIGYF1O75420 1035 aaPredicted RBP34.4■■■■□ 3.1
LIMD2-208ENST00000579814 BABAM1Q9NWV8 329 aa34.4■■■■□ 3.1
LIMD2-208ENST00000579814 C10orf71Q711Q0 1435 aa34.39■■■■□ 3.1
LIMD2-208ENST00000579814 PIP4K2AP48426 406 aaPredicted RBP34.39■■■■□ 3.1
LIMD2-208ENST00000579814 A0A0G2JLW4 131 aa34.38■■■■□ 3.09
LIMD2-208ENST00000579814 BICDL1Q6ZP65 573 aa34.37■■■■□ 3.09
LIMD2-208ENST00000579814 DZIP3Q86Y13 1208 aaKnown RBP34.37■■■■□ 3.09
LIMD2-208ENST00000579814 WWC3Q9ULE0 1092 aa34.37■■■■□ 3.09
LIMD2-208ENST00000579814 SERPINB2P05120 415 aa34.35■■■■□ 3.09
LIMD2-208ENST00000579814 DPEP1P16444 411 aa34.35■■■■□ 3.09
LIMD2-208ENST00000579814 TRIM35Q9UPQ4 493 aa34.35■■■■□ 3.09
LIMD2-208ENST00000579814 NBPF26B4DH59 902 aa34.34■■■■□ 3.09
LIMD2-208ENST00000579814 NBPF10Q6P3W6 841 aaKnown RBP34.34■■■■□ 3.09
LIMD2-208ENST00000579814 NBPF15Q8N660 670 aa34.34■■■■□ 3.09
LIMD2-208ENST00000579814 CAMTA2O94983 1202 aa34.33■■■■□ 3.09
LIMD2-208ENST00000579814 TBC1D9BQ66K14 1250 aa34.33■■■■□ 3.09
LIMD2-208ENST00000579814 DLG5Q8TDM6 1919 aa34.33■■■■□ 3.09
LIMD2-208ENST00000579814 PXDNLA1KZ92 1463 aa34.33■■■■□ 3.09
LIMD2-208ENST00000579814 APAF1O14727 1248 aa34.3■■■■□ 3.08
LIMD2-208ENST00000579814 CCDC184Q52MB2 194 aa34.3■■■■□ 3.08
LIMD2-208ENST00000579814 SETDB2Q96T68 719 aa34.29■■■■□ 3.08
LIMD2-208ENST00000579814 BCS1LQ9Y276 419 aa34.29■■■■□ 3.08
LIMD2-208ENST00000579814 CLEC4GQ6UXB4 293 aa34.28■■■■□ 3.08
LIMD2-208ENST00000579814 ZNF652Q9Y2D9 606 aa34.28■■■■□ 3.08
LIMD2-208ENST00000579814 LAS1LQ9Y4W2 734 aaKnown RBP34.28■■■■□ 3.08
LIMD2-208ENST00000579814 UTRNP46939 3433 aa34.27■■■■□ 3.08
LIMD2-208ENST00000579814 CHL1O00533 1208 aa34.27■■■■□ 3.08
LIMD2-208ENST00000579814 PIM2Q9P1W9 311 aa34.27■■■■□ 3.08
LIMD2-208ENST00000579814 KCNA3P22001 575 aa34.26■■■■□ 3.08
LIMD2-208ENST00000579814 MRS2Q9HD23 443 aa34.25■■■■□ 3.07
LIMD2-208ENST00000579814 RGL2O15211 777 aa34.24■■■■□ 3.07
LIMD2-208ENST00000579814 NGEFQ8N5V2 710 aa34.24■■■■□ 3.07
LIMD2-208ENST00000579814 CHRNA5P30532 468 aa34.23■■■■□ 3.07
LIMD2-208ENST00000579814 CARMIL3Q8ND23 1372 aa34.23■■■■□ 3.07
LIMD2-208ENST00000579814 EIF2S2P20042 333 aaKnown RBP34.22■■■■□ 3.07
LIMD2-208ENST00000579814 ERBB4Q15303 1308 aa34.22■■■■□ 3.07
LIMD2-208ENST00000579814 KDM3BQ7LBC6 1761 aa34.21■■■■□ 3.07
LIMD2-208ENST00000579814 NPHP1O15259 732 aa34.21■■■■□ 3.07
LIMD2-208ENST00000579814 MYL6BP14649 208 aa34.21■■■■□ 3.07
LIMD2-208ENST00000579814 DALRD3Q5D0E6 543 aaKnown RBP34.21■■■■□ 3.07
LIMD2-208ENST00000579814 ZNF784Q8NCA9 323 aaPredicted RBP34.21■■■■□ 3.07
LIMD2-208ENST00000579814 GOLGB1Q14789 3259 aaKnown RBP34.21■■■■□ 3.07
LIMD2-208ENST00000579814 KIF13BQ9NQT8 1826 aa34.2■■■■□ 3.07
LIMD2-208ENST00000579814 CALD1Q05682 793 aaKnown RBP34.2■■■■□ 3.07
LIMD2-208ENST00000579814 CFAP44Q96MT7 982 aa34.2■■■■□ 3.07
LIMD2-208ENST00000579814 ERVV-1B6SEH8 477 aa34.17■■■■□ 3.06
LIMD2-208ENST00000579814 PRR5LQ6MZQ0 368 aa34.17■■■■□ 3.06
LIMD2-208ENST00000579814 KIF6Q6ZMV9 814 aa34.17■■■■□ 3.06
LIMD2-208ENST00000579814 CNBD1Q8NA66 436 aa34.17■■■■□ 3.06
LIMD2-208ENST00000579814 BRIP1Q9BX63 1249 aa34.17■■■■□ 3.06
LIMD2-208ENST00000579814 H0YIN7 160 aa34.16■■■■□ 3.06
LIMD2-208ENST00000579814 C2CD5Q86YS7 1000 aa34.16■■■■□ 3.06
LIMD2-208ENST00000579814 PDZRN3Q9UPQ7 1066 aa34.16■■■■□ 3.06
LIMD2-208ENST00000579814 NIP7Q9Y221 180 aaKnown RBP eCLIP34.16■■■■□ 3.06
LIMD2-208ENST00000579814 PDE6BP35913 854 aa34.15■■■■□ 3.06
LIMD2-208ENST00000579814 HLFQ16534 295 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms