RNA–Protein interactions for RNA: ENST00000579618.1

SNRPD1-203, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 5 BASIC

Gene SNRPD1, Length 320 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-203ENST00000579618 POTECB2RU33 542 aa13.82□□□□□ -0.2
SNRPD1-203ENST00000579618 FOXN1O15353 648 aa13.82□□□□□ -0.2
SNRPD1-203ENST00000579618 EYA1Q99502 592 aa13.82□□□□□ -0.2
SNRPD1-203ENST00000579618 MKRN1Q9UHC7 482 aaKnown RBP13.82□□□□□ -0.2
SNRPD1-203ENST00000579618 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
SNRPD1-203ENST00000579618 POLRMTO00411 1230 aaKnown RBP13.81□□□□□ -0.2
SNRPD1-203ENST00000579618 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
SNRPD1-203ENST00000579618 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
SNRPD1-203ENST00000579618 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.81□□□□□ -0.22e-9■■□□□ 11.7
SNRPD1-203ENST00000579618 PPM1GO15355 546 aaPredicted RBP13.8□□□□□ -0.2
SNRPD1-203ENST00000579618 LMNB1P20700 586 aa13.8□□□□□ -0.2
SNRPD1-203ENST00000579618 CRKLP46109 303 aaKnown RBP13.79□□□□□ -0.2
SNRPD1-203ENST00000579618 MYBBP1AQ9BQG0 1328 aaKnown RBP13.79□□□□□ -0.2
SNRPD1-203ENST00000579618 FAM161AQ3B820 660 aa13.78□□□□□ -0.2
SNRPD1-203ENST00000579618 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
SNRPD1-203ENST00000579618 VIRMAQ69YN4 1812 aaKnown RBP13.78□□□□□ -0.2
SNRPD1-203ENST00000579618 DICER1Q9UPY3 1922 aaKnown RBP13.78□□□□□ -0.2
SNRPD1-203ENST00000579618 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 NFKBIEO00221 500 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 TM4SF1P30408 202 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 PRDM10Q9NQV6 1147 aa13.77□□□□□ -0.21
SNRPD1-203ENST00000579618 CCER2I3L3R5 266 aa13.76□□□□□ -0.21
SNRPD1-203ENST00000579618 PTCD1O75127 700 aaKnown RBP13.76□□□□□ -0.21
SNRPD1-203ENST00000579618 COL11A2P13942 1736 aaPredicted RBP13.76□□□□□ -0.21
SNRPD1-203ENST00000579618 CARMIL3Q8ND23 1372 aa13.75□□□□□ -0.21
SNRPD1-203ENST00000579618 USPL1Q5W0Q7 1092 aa13.75□□□□□ -0.21
SNRPD1-203ENST00000579618 FER1L6Q2WGJ9 1857 aa13.74□□□□□ -0.21
SNRPD1-203ENST00000579618 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
SNRPD1-203ENST00000579618 CHADLQ6NUI6 762 aa13.74□□□□□ -0.21
SNRPD1-203ENST00000579618 MIER1Q8N108 512 aa13.74□□□□□ -0.21
SNRPD1-203ENST00000579618 PPP2R1AP30153 589 aa13.73□□□□□ -0.21
SNRPD1-203ENST00000579618 CTCFP49711 727 aaPredicted RBP13.73□□□□□ -0.21
SNRPD1-203ENST00000579618 CABP4P57796 275 aa13.73□□□□□ -0.21
SNRPD1-203ENST00000579618 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
SNRPD1-203ENST00000579618 EIF4A2Q14240 407 aaKnown RBP13.73□□□□□ -0.21
SNRPD1-203ENST00000579618 CACNA1SQ13698 1873 aa13.72□□□□□ -0.21
SNRPD1-203ENST00000579618 INTS5Q6P9B9 1019 aaKnown RBP13.72□□□□□ -0.21
SNRPD1-203ENST00000579618 TTLL6Q8N841 843 aa13.72□□□□□ -0.21
SNRPD1-203ENST00000579618 ABHD8Q96I13 439 aa13.72□□□□□ -0.21
SNRPD1-203ENST00000579618 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 SOS1Q07889 1333 aaPredicted RBP13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 HSP90AB1P08238 724 aaKnown RBP13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 VEGFBP49765 207 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 LBX1P52954 281 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 NFIXQ14938 502 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 DPY19L2Q6NUT2 758 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 ZNF530Q6P9A1 599 aaPredicted RBP13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 AIDAQ96BJ3 306 aa13.71□□□□□ -0.21
SNRPD1-203ENST00000579618 COL15A1P39059 1388 aa13.71□□□□□ -0.22
SNRPD1-203ENST00000579618 ZPR1O75312 459 aa13.7□□□□□ -0.22
SNRPD1-203ENST00000579618 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
SNRPD1-203ENST00000579618 CFAP53Q96M91 514 aa13.7□□□□□ -0.22
SNRPD1-203ENST00000579618 ZNF219Q9P2Y4 722 aaPredicted RBP13.7□□□□□ -0.22
SNRPD1-203ENST00000579618 POLKQ9UBT6 870 aa13.7□□□□□ -0.22
SNRPD1-203ENST00000579618 SERPINB2P05120 415 aa13.69□□□□□ -0.22
SNRPD1-203ENST00000579618 ERFEQ4G0M1 354 aa13.69□□□□□ -0.22
SNRPD1-203ENST00000579618 DNAJC10Q8IXB1 793 aa13.69□□□□□ -0.22
SNRPD1-203ENST00000579618 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
SNRPD1-203ENST00000579618 ADAMTSL1Q8N6G6 1762 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 DDNO94850 711 aaPredicted RBP13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 HSPA8P11142 646 aaKnown RBP13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 MTHFSP49914 203 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 NFATC2IPQ8NCF5 419 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 WBP1LQ9NX94 342 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 SCN7AQ01118 1682 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 ARFGEF2Q9Y6D5 1785 aa13.68□□□□□ -0.22
SNRPD1-203ENST00000579618 SCN4AP35499 1836 aa13.67□□□□□ -0.22
SNRPD1-203ENST00000579618 PLEKHO1Q53GL0 409 aaPredicted RBP13.67□□□□□ -0.22
SNRPD1-203ENST00000579618 PCDH10Q9P2E7 1040 aa13.67□□□□□ -0.22
SNRPD1-203ENST00000579618 NARFQ9UHQ1 456 aa13.67□□□□□ -0.22
SNRPD1-203ENST00000579618 THSD7BQ9C0I4 1608 aa13.67□□□□□ -0.22
SNRPD1-203ENST00000579618 H0YIN7 160 aa13.66□□□□□ -0.22
SNRPD1-203ENST00000579618 C21orf2O43822 256 aa13.66□□□□□ -0.22
SNRPD1-203ENST00000579618 MRS2Q9HD23 443 aa13.66□□□□□ -0.22
SNRPD1-203ENST00000579618 ZBTB1Q9Y2K1 713 aa13.66□□□□□ -0.22
SNRPD1-203ENST00000579618 TMEM88BA6NKF7 163 aa13.65□□□□□ -0.22
SNRPD1-203ENST00000579618 AEBP1Q8IUX7 1158 aa13.65□□□□□ -0.22
SNRPD1-203ENST00000579618 ZNF622Q969S3 477 aaKnown RBP eCLIP13.65□□□□□ -0.223e-16■□□□□ 10.2
SNRPD1-203ENST00000579618 SLX4Q8IY92 1834 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 MRC1P22897 1456 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 MLLT1Q03111 559 aaPredicted RBP13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 C1orf141Q5JVX7 400 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 CCDC24Q8N4L8 307 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 LTBP3Q9NS15 1303 aa13.64□□□□□ -0.23
SNRPD1-203ENST00000579618 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 CYP19A1P11511 503 aaPredicted RBP13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 AMOTQ4VCS5 1084 aa13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 BICDL1Q6ZP65 573 aa13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 TAOK3Q9H2K8 898 aa13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 TAF1DQ9H5J8 278 aaPredicted RBP13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 NUDCQ9Y266 331 aa13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 UBR2Q8IWV8 1755 aa13.63□□□□□ -0.23
SNRPD1-203ENST00000579618 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
SNRPD1-203ENST00000579618 CCDC85CA6NKD9 419 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms