RNA–Protein interactions for RNA: ENST00000579451.1

PSMD11-208, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-208ENST00000579451 PIM2Q9P1W9 311 aa20.52■□□□□ 0.88
PSMD11-208ENST00000579451 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
PSMD11-208ENST00000579451 POLRMTO00411 1230 aaKnown RBP20.51■□□□□ 0.87
PSMD11-208ENST00000579451 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
PSMD11-208ENST00000579451 VSIG10Q8N0Z9 540 aa20.5■□□□□ 0.87
PSMD11-208ENST00000579451 CCDC88AQ3V6T2 1871 aa20.5■□□□□ 0.87
PSMD11-208ENST00000579451 COL15A1P39059 1388 aa20.49■□□□□ 0.87
PSMD11-208ENST00000579451 DALRD3Q5D0E6 543 aaKnown RBP20.49■□□□□ 0.87
PSMD11-208ENST00000579451 NARFQ9UHQ1 456 aa20.49■□□□□ 0.87
PSMD11-208ENST00000579451 ZBTB1Q9Y2K1 713 aa20.48■□□□□ 0.87
PSMD11-208ENST00000579451 CHRNA5P30532 468 aa20.47■□□□□ 0.87
PSMD11-208ENST00000579451 C9orf131Q5VYM1 1079 aa20.46■□□□□ 0.87
PSMD11-208ENST00000579451 SCN7AQ01118 1682 aa20.45■□□□□ 0.86
PSMD11-208ENST00000579451 TNRC6CQ9HCJ0 1690 aaKnown RBP20.45■□□□□ 0.86
PSMD11-208ENST00000579451 TOMM70O94826 608 aa20.45■□□□□ 0.86
PSMD11-208ENST00000579451 NFIXQ14938 502 aa20.45■□□□□ 0.86
PSMD11-208ENST00000579451 ANKRD31Q8N7Z5 1873 aa20.44■□□□□ 0.86
PSMD11-208ENST00000579451 U2SURPO15042 1029 aaKnown RBP20.44■□□□□ 0.86
PSMD11-208ENST00000579451 TTC5Q8N0Z6 440 aa20.44■□□□□ 0.86
PSMD11-208ENST00000579451 GAS2L2Q8NHY3 880 aa20.44■□□□□ 0.86
PSMD11-208ENST00000579451 BCL2L12Q9HB09 334 aa20.44■□□□□ 0.86
PSMD11-208ENST00000579451 NMRK2Q9NPI5 230 aa20.43■□□□□ 0.86
PSMD11-208ENST00000579451 GNAT3A8MTJ3 354 aa20.42■□□□□ 0.86
PSMD11-208ENST00000579451 STARD3NLO95772 234 aa20.42■□□□□ 0.86
PSMD11-208ENST00000579451 CANXP27824 592 aaKnown RBP20.42■□□□□ 0.86
PSMD11-208ENST00000579451 TEFQ10587 303 aa20.42■□□□□ 0.86
PSMD11-208ENST00000579451 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
PSMD11-208ENST00000579451 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
PSMD11-208ENST00000579451 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
PSMD11-208ENST00000579451 SERPINB2P05120 415 aa20.41■□□□□ 0.86
PSMD11-208ENST00000579451 EIF5P55010 431 aaKnown RBP20.41■□□□□ 0.86
PSMD11-208ENST00000579451 HEG1Q9ULI3 1381 aa20.41■□□□□ 0.86
PSMD11-208ENST00000579451 ZNF790Q6PG37 636 aa20.4■□□□□ 0.86
PSMD11-208ENST00000579451 ZNF496Q96IT1 587 aaPredicted RBP20.4■□□□□ 0.86
PSMD11-208ENST00000579451 RNF181Q9P0P0 153 aa20.4■□□□□ 0.86
PSMD11-208ENST00000579451 CACNA1SQ13698 1873 aa20.39■□□□□ 0.86
PSMD11-208ENST00000579451 BCORQ6W2J9 1755 aa20.39■□□□□ 0.86
PSMD11-208ENST00000579451 TIAM2Q8IVF5 1701 aa20.39■□□□□ 0.86
PSMD11-208ENST00000579451 APLP1P51693 650 aa20.39■□□□□ 0.85
PSMD11-208ENST00000579451 TEX13AQ9BXU3 409 aaPredicted RBP20.39■□□□□ 0.85
PSMD11-208ENST00000579451 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
PSMD11-208ENST00000579451 CEMIPQ8WUJ3 1361 aa20.38■□□□□ 0.85
PSMD11-208ENST00000579451 KDM2BQ8NHM5 1336 aa20.38■□□□□ 0.85
PSMD11-208ENST00000579451 A0A087WZG4 1122 aa20.38■□□□□ 0.85
PSMD11-208ENST00000579451 COL11A2P13942 1736 aaPredicted RBP20.37■□□□□ 0.85
PSMD11-208ENST00000579451 RBM46Q8TBY0 533 aaKnown RBP20.37■□□□□ 0.85
PSMD11-208ENST00000579451 CARMIL3Q8ND23 1372 aa20.36■□□□□ 0.85
PSMD11-208ENST00000579451 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
PSMD11-208ENST00000579451 FER1L6Q2WGJ9 1857 aa20.36■□□□□ 0.85
PSMD11-208ENST00000579451 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
PSMD11-208ENST00000579451 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 BICDL1Q6ZP65 573 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 C2CD5Q86YS7 1000 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
PSMD11-208ENST00000579451 TTLL6Q8N841 843 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 PHACTR3Q96KR7 559 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 FMNL2Q96PY5 1086 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
PSMD11-208ENST00000579451 ARFGEF2Q9Y6D5 1785 aa20.34■□□□□ 0.85
PSMD11-208ENST00000579451 ZC3H4Q9UPT8 1303 aaKnown RBP20.34■□□□□ 0.85
PSMD11-208ENST00000579451 H0YIN7 160 aa20.34■□□□□ 0.85
PSMD11-208ENST00000579451 PRKAR2BP31323 418 aa20.34■□□□□ 0.85
PSMD11-208ENST00000579451 RASSF7Q02833 373 aa20.34■□□□□ 0.85
PSMD11-208ENST00000579451 TBC1D9BQ66K14 1250 aa20.34■□□□□ 0.85
PSMD11-208ENST00000579451 DLG5Q8TDM6 1919 aa20.33■□□□□ 0.84
PSMD11-208ENST00000579451 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
PSMD11-208ENST00000579451 LMNB1P20700 586 aa20.32■□□□□ 0.84
PSMD11-208ENST00000579451 RRAGCQ9HB90 399 aa20.32■□□□□ 0.84
PSMD11-208ENST00000579451 TBC1D2BQ9UPU7 963 aa20.32■□□□□ 0.84
PSMD11-208ENST00000579451 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
PSMD11-208ENST00000579451 ZNF330Q9Y3S2 320 aaPredicted RBP20.32■□□□□ 0.84
PSMD11-208ENST00000579451 FSTL1Q12841 308 aa20.31■□□□□ 0.84
PSMD11-208ENST00000579451 DNAJC5GQ8N7S2 189 aa20.31■□□□□ 0.84
PSMD11-208ENST00000579451 PDZRN3Q9UPQ7 1066 aa20.31■□□□□ 0.84
PSMD11-208ENST00000579451 KCNQ3O43525 872 aa20.3■□□□□ 0.84
PSMD11-208ENST00000579451 A1BGP04217 495 aa20.3■□□□□ 0.84
PSMD11-208ENST00000579451 PRELPP51888 382 aa20.3■□□□□ 0.84
PSMD11-208ENST00000579451 BRIP1Q9BX63 1249 aa20.3■□□□□ 0.84
PSMD11-208ENST00000579451 SLX4Q8IY92 1834 aa20.3■□□□□ 0.84
PSMD11-208ENST00000579451 PDE6BP35913 854 aa20.29■□□□□ 0.84
PSMD11-208ENST00000579451 PRR5LQ6MZQ0 368 aa20.29■□□□□ 0.84
PSMD11-208ENST00000579451 NPM2Q86SE8 214 aaKnown RBP20.29■□□□□ 0.84
PSMD11-208ENST00000579451 CAMTA2O94983 1202 aa20.28■□□□□ 0.84
PSMD11-208ENST00000579451 PPP2R1AP30153 589 aa20.28■□□□□ 0.84
PSMD11-208ENST00000579451 LAMB4A4D0S4 1761 aa20.28■□□□□ 0.84
PSMD11-208ENST00000579451 GLTPD2A6NH11 291 aa20.27■□□□□ 0.84
PSMD11-208ENST00000579451 NFKBIEO00221 500 aa20.27■□□□□ 0.84
PSMD11-208ENST00000579451 U2AF1L5P0DN76 240 aaPredicted RBP20.27■□□□□ 0.84
PSMD11-208ENST00000579451 U2AF1Q01081 240 aaKnown RBP eCLIP20.27■□□□□ 0.84
PSMD11-208ENST00000579451 ZNF622Q969S3 477 aaKnown RBP eCLIP20.27■□□□□ 0.841e-8■□□□□ 9.8
PSMD11-208ENST00000579451 SETDB2Q96T68 719 aa20.27■□□□□ 0.84
PSMD11-208ENST00000579451 USP16Q9Y5T5 823 aa20.27■□□□□ 0.84
PSMD11-208ENST00000579451 DZIP3Q86Y13 1208 aaKnown RBP20.26■□□□□ 0.83
PSMD11-208ENST00000579451 CCDC24Q8N4L8 307 aa20.26■□□□□ 0.83
PSMD11-208ENST00000579451 RTF1Q92541 710 aaKnown RBP20.26■□□□□ 0.83
PSMD11-208ENST00000579451 MCM10Q7L590 875 aa20.25■□□□□ 0.83
PSMD11-208ENST00000579451 CNBD1Q8NA66 436 aa20.24■□□□□ 0.83
PSMD11-208ENST00000579451 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
PSMD11-208ENST00000579451 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
PSMD11-208ENST00000579451 PRAMEF22A3QJZ6 481 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 626.5 ms