RNA–Protein interactions for RNA: ENST00000579081.5

NF1-219, Transcript of neurofibromin 1, humanhuman

TSL 1 (best)

Gene NF1, Length 8,788 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-219ENST00000579081 FSD2A1L4K1 749 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 KANK4Q5T7N3 995 aaPredicted RBP5.91□□□□□ -1.46
NF1-219ENST00000579081 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
NF1-219ENST00000579081 HDGFL1Q5TGJ6 251 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 FAM114A1Q8IWE2 563 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 SRCIN1Q9C0H9 1055 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 PDRG1Q9NUG6 133 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 SLU7O95391 586 aaKnown RBP5.91□□□□□ -1.46
NF1-219ENST00000579081 PAFAH1B1P43034 410 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 FILIP1Q7Z7B0 1213 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 NUP62CLQ9H1M0 184 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 CCDC96Q2M329 555 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 RGS22Q8NE09 1264 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 ZC3H15Q8WU90 426 aaKnown RBP5.91□□□□□ -1.46
NF1-219ENST00000579081 MKNK2Q9HBH9 465 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 MAP4K4O95819 1239 aaPredicted RBP5.91□□□□□ -1.46
NF1-219ENST00000579081 MAP3K9P80192 1104 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 CFAP100Q494V2 611 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 ZNF354CQ86Y25 554 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 ZNF622Q969S3 477 aaKnown RBP eCLIP5.91□□□□□ -1.466e-7■□□□□ 8.1
NF1-219ENST00000579081 AIDAQ96BJ3 306 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 CUL7Q14999 1698 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 UHRF1BP1LA0JNW5 1464 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 ZBTB17Q13105 803 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 TMEM266Q2M3C6 531 aa5.91□□□□□ -1.46
NF1-219ENST00000579081 USO1O60763 962 aaKnown RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 ARL1P40616 181 aaPredicted RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 CBX1P83916 185 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 UVSSAQ2YD98 709 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 PPP1R14CQ8TAE6 165 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 RAB34Q9BZG1 259 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 SERPINA10Q9UK55 444 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 BUB1BO60566 1050 aaPredicted RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 ACTN2P35609 894 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 CETN1Q12798 172 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 KRT32Q14532 448 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 TWISTNBQ3B726 338 aaPredicted RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 SPECC1Q5M775 1068 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 CCDC141Q6ZP82 1450 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 IDH1O75874 414 aaKnown RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 ISM2Q6H9L7 571 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 SREK1Q8WXA9 508 aaKnown RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 PAXBP1Q9Y5B6 917 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 TEX14Q8IWB6 1497 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 BAG4O95429 457 aaKnown RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 MYL6BP14649 208 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 CNGA1P29973 690 aa5.9□□□□□ -1.46
NF1-219ENST00000579081 CCT4P50991 539 aaKnown RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 PRKRIP1Q9H875 184 aaPredicted RBP5.9□□□□□ -1.46
NF1-219ENST00000579081 ERICH4A6NGS2 130 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 TDRD12Q587J7 1177 aaKnown RBP5.9□□□□□ -1.47
NF1-219ENST00000579081 PRPF38AQ8NAV1 312 aaKnown RBP5.9□□□□□ -1.47
NF1-219ENST00000579081 NAP1L3Q99457 506 aaPredicted RBP5.9□□□□□ -1.47
NF1-219ENST00000579081 CABP2Q9NPB3 220 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 CECR2Q9BXF3 1484 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 ZSCAN12O43309 604 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 AACSQ86V21 672 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 GDAP1L1Q96MZ0 367 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 ABCF2Q9UG63 623 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 IBTKQ9P2D0 1353 aaPredicted RBP5.9□□□□□ -1.47
NF1-219ENST00000579081 KIF5CO60282 957 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 KIF4BQ2VIQ3 1234 aa5.9□□□□□ -1.47
NF1-219ENST00000579081 DNA2P51530 1060 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 TIGD1Q96MW7 591 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 SEC62Q99442 399 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 PHAXQ9H814 394 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 SPINK5Q9NQ38 1064 aaPredicted RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 POLE3Q9NRF9 147 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 ZNF530Q6P9A1 599 aaPredicted RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 JAKMIP1Q96N16 626 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 SUPT6HQ7KZ85 1726 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 PRC1O43663 620 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 SLC4A2P04920 1241 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 CASQ1P31415 396 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 CAVIN4Q5BKX8 364 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 DAAM2Q86T65 1068 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 ZNF444Q8N0Y2 327 aaPredicted RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 GFM2Q969S9 779 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 MPHOSPH6Q99547 160 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.89□□□□□ -1.47
NF1-219ENST00000579081 PDZRN3Q9UPQ7 1066 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 RAD50Q92878 1312 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 SPECC1LQ69YQ0 1117 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 PUF60Q9UHX1 559 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 SMAP1Q8IYB5 467 aaPredicted RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 FBF1Q8TES7 1133 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 SMARCC1Q92922 1105 aaPredicted RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 NAA15Q9BXJ9 866 aaKnown RBP5.89□□□□□ -1.47
NF1-219ENST00000579081 C1orf115Q9H7X2 142 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 EHBP1L1Q8N3D4 1523 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 STXBP4Q6ZWJ1 553 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 ZSCAN30Q86W11 494 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 CLIP2Q9UDT6 1046 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 IKBKGQ9Y6K9 419 aa5.89□□□□□ -1.47
NF1-219ENST00000579081 TTC21AQ8NDW8 1320 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 PIP4K2BP78356 416 aa5.88□□□□□ -1.47
NF1-219ENST00000579081 EXOSC9Q06265 439 aaKnown RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 DZIP1Q86YF9 867 aaKnown RBP5.88□□□□□ -1.47
NF1-219ENST00000579081 KIF1CO43896 1103 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms