RNA–Protein interactions for RNA: ENST00000578886.1

TRAPPC8-206, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-206ENST00000578886 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC8-206ENST00000578886 AVENQ9NQS1 362 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC8-206ENST00000578886 KRTAP19-1Q8IUB9 90 aa8.58□□□□□ -1.04
TRAPPC8-206ENST00000578886 FCHSD1Q86WN1 690 aa8.57□□□□□ -1.04
TRAPPC8-206ENST00000578886 PCDHGC4Q9Y5F7 938 aa8.57□□□□□ -1.04
TRAPPC8-206ENST00000578886 SPDYE3A6NKU9 549 aa8.56□□□□□ -1.04
TRAPPC8-206ENST00000578886 RHBDD1Q8TEB9 315 aa8.56□□□□□ -1.04
TRAPPC8-206ENST00000578886 XAGE2Q96GT9 111 aa8.56□□□□□ -1.04
TRAPPC8-206ENST00000578886 DNAAF2Q9NVR5 837 aaKnown RBP8.56□□□□□ -1.04
TRAPPC8-206ENST00000578886 KRTAP4-8A0A0G2JLE6 195 aa8.55□□□□□ -1.04
TRAPPC8-206ENST00000578886 FAM182BQ5T319 152 aa8.55□□□□□ -1.04
TRAPPC8-206ENST00000578886 KLF15Q9UIH9 416 aa8.55□□□□□ -1.04
TRAPPC8-206ENST00000578886 TBC1D2BQ9UPU7 963 aa8.55□□□□□ -1.04
TRAPPC8-206ENST00000578886 NDUFB9Q9Y6M9 179 aa8.55□□□□□ -1.04
TRAPPC8-206ENST00000578886 PRRT3Q5FWE3 981 aa8.54□□□□□ -1.04
TRAPPC8-206ENST00000578886 ESCO1Q5FWF5 840 aa8.54□□□□□ -1.04
TRAPPC8-206ENST00000578886 PRSS36Q5K4E3 855 aa8.54□□□□□ -1.04
TRAPPC8-206ENST00000578886 ZCCHC2Q9C0B9 1178 aaKnown RBP8.54□□□□□ -1.04
TRAPPC8-206ENST00000578886 GOLGA2P5Q9HBQ8 144 aa8.54□□□□□ -1.04
TRAPPC8-206ENST00000578886 APBA3O96018 575 aa8.53□□□□□ -1.04
TRAPPC8-206ENST00000578886 MYCP01106 439 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC8-206ENST00000578886 LRP8Q14114 963 aa8.53□□□□□ -1.04
TRAPPC8-206ENST00000578886 MCM6Q14566 821 aa8.53□□□□□ -1.04
TRAPPC8-206ENST00000578886 TBC1D9Q6ZT07 1266 aa8.53□□□□□ -1.04
TRAPPC8-206ENST00000578886 NLRP8Q86W28 1048 aa8.52□□□□□ -1.05
TRAPPC8-206ENST00000578886 PPARGC1BQ86YN6 1023 aaKnown RBP8.52□□□□□ -1.05
TRAPPC8-206ENST00000578886 ATXN7O15265 892 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC8-206ENST00000578886 NR1H3Q13133 447 aa8.51□□□□□ -1.05
TRAPPC8-206ENST00000578886 C1orf216Q8TAB5 229 aa8.51□□□□□ -1.05
TRAPPC8-206ENST00000578886 ZNF330Q9Y3S2 320 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC8-206ENST00000578886 DCDC2BA2VCK2 349 aa8.5□□□□□ -1.05
TRAPPC8-206ENST00000578886 CD33P20138 364 aa8.5□□□□□ -1.05
TRAPPC8-206ENST00000578886 IRF5Q13568 498 aa8.5□□□□□ -1.05
TRAPPC8-206ENST00000578886 ZNF468Q5VIY5 522 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC8-206ENST00000578886 MAPTP10636 758 aaKnown RBP8.49□□□□□ -1.05
TRAPPC8-206ENST00000578886 ATP4AP20648 1035 aa8.49□□□□□ -1.05
TRAPPC8-206ENST00000578886 PLA2G4AP47712 749 aa8.49□□□□□ -1.05
TRAPPC8-206ENST00000578886 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
TRAPPC8-206ENST00000578886 HCN2Q9UL51 889 aa8.49□□□□□ -1.05
TRAPPC8-206ENST00000578886 APBB1O00213 710 aa8.48□□□□□ -1.05
TRAPPC8-206ENST00000578886 TNP2Q05952 138 aa8.48□□□□□ -1.05
TRAPPC8-206ENST00000578886 TLR1Q15399 786 aa8.48□□□□□ -1.05
TRAPPC8-206ENST00000578886 GDPD2Q9HCC8 539 aa8.48□□□□□ -1.05
TRAPPC8-206ENST00000578886 PCBP4P57723 403 aaKnown RBP8.47□□□□□ -1.05
TRAPPC8-206ENST00000578886 TMEM132AQ24JP5 1023 aa8.47□□□□□ -1.05
TRAPPC8-206ENST00000578886 ELOA3CA0A087WX78 387 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 ELOA3DA6NLF2 546 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 ELOA3BQ3SY89 546 aa8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 ELOA3Q8NG57 546 aa8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
TRAPPC8-206ENST00000578886 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
TRAPPC8-206ENST00000578886 H2AFB2P0C5Z0 115 aa8.45□□□□□ -1.06
TRAPPC8-206ENST00000578886 CDCA7Q9BWT1 371 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC8-206ENST00000578886 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
TRAPPC8-206ENST00000578886 FAM157BP0CG42 384 aa8.44□□□□□ -1.06
TRAPPC8-206ENST00000578886 ALAS2P22557 587 aa8.44□□□□□ -1.06
TRAPPC8-206ENST00000578886 ABL2P42684 1182 aa8.44□□□□□ -1.06
TRAPPC8-206ENST00000578886 CCDC85AQ96PX6 553 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC8-206ENST00000578886 A0A1W2PNR3 127 aa8.43□□□□□ -1.06
TRAPPC8-206ENST00000578886 FAM229AH3BQW9 127 aa8.43□□□□□ -1.06
TRAPPC8-206ENST00000578886 HYAL3O43820 417 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC8-206ENST00000578886 POM121Q96HA1 1249 aa8.43□□□□□ -1.06
TRAPPC8-206ENST00000578886 COG6Q9Y2V7 657 aa8.43□□□□□ -1.06
TRAPPC8-206ENST00000578886 VAC14Q08AM6 782 aa8.42□□□□□ -1.06
TRAPPC8-206ENST00000578886 TRIM28Q13263 835 aaKnown RBP8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 NBPF1Q3BBV0 1214 aa8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 ARSJQ5FYB0 599 aaPredicted RBP8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 MDFIQ99750 246 aa8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 NIFKQ9BYG3 293 aaKnown RBP8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 PRDM6Q9NQX0 595 aa8.41□□□□□ -1.06
TRAPPC8-206ENST00000578886 STAU1O95793 577 aaKnown RBP8.4□□□□□ -1.06
TRAPPC8-206ENST00000578886 MARK1Q9P0L2 795 aa8.4□□□□□ -1.06
TRAPPC8-206ENST00000578886 M0R082 166 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 COL9A3Q14050 684 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 SAMD5Q5TGI4 173 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 SYT9Q86SS6 491 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 ZNF417Q8TAU3 575 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 ZNF587Q96SQ5 575 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 PRM3Q9NNZ6 103 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 CEP126Q9P2H0 1117 aa8.39□□□□□ -1.07
TRAPPC8-206ENST00000578886 EFSO43281 561 aa8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 TATP17735 454 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 USP4Q13107 963 aa8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 GRIK4Q16099 956 aa8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 MCTP1Q6DN14 999 aa8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 GJA3Q9Y6H8 435 aa8.38□□□□□ -1.07
TRAPPC8-206ENST00000578886 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
TRAPPC8-206ENST00000578886 C9orf172C9J069 976 aa8.37□□□□□ -1.07
TRAPPC8-206ENST00000578886 ADGRE1Q14246 886 aa8.37□□□□□ -1.07
TRAPPC8-206ENST00000578886 STRN4Q9NRL3 753 aa8.37□□□□□ -1.07
TRAPPC8-206ENST00000578886 ZDHHC3Q9NYG2 299 aa8.37□□□□□ -1.07
TRAPPC8-206ENST00000578886 SIN3BO75182 1162 aa8.36□□□□□ -1.07
TRAPPC8-206ENST00000578886 TSGA10IPQ3SY00 556 aa8.36□□□□□ -1.07
TRAPPC8-206ENST00000578886 DOLKQ9UPQ8 538 aa8.36□□□□□ -1.07
TRAPPC8-206ENST00000578886 NID1P14543 1247 aa8.35□□□□□ -1.07
TRAPPC8-206ENST00000578886 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRAPPC8-206ENST00000578886 FLIIQ13045 1269 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms