RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 UBR2Q8IWV8 1755 aa30.49■■■□□ 2.47
VAPA-205ENST00000578314 KCNQ3O43525 872 aa30.48■■■□□ 2.47
VAPA-205ENST00000578314 DCTN1Q14203 1278 aa30.48■■■□□ 2.47
VAPA-205ENST00000578314 SIPA1L3O60292 1781 aaPredicted RBP30.48■■■□□ 2.47
VAPA-205ENST00000578314 FKBP8Q14318 412 aa30.47■■■□□ 2.47
VAPA-205ENST00000578314 ZPR1O75312 459 aa30.45■■■□□ 2.47
VAPA-205ENST00000578314 PARP3Q9Y6F1 533 aa30.45■■■□□ 2.47
VAPA-205ENST00000578314 NFE2L2Q16236 605 aa30.44■■■□□ 2.46
VAPA-205ENST00000578314 USPL1Q5W0Q7 1092 aa30.44■■■□□ 2.46
VAPA-205ENST00000578314 NARFQ9UHQ1 456 aa30.44■■■□□ 2.46
VAPA-205ENST00000578314 COL15A1P39059 1388 aa30.43■■■□□ 2.46
VAPA-205ENST00000578314 C4AP0C0L4 1744 aa30.43■■■□□ 2.46
VAPA-205ENST00000578314 CANXP27824 592 aaKnown RBP30.43■■■□□ 2.46
VAPA-205ENST00000578314 EIF5P55010 431 aaKnown RBP30.43■■■□□ 2.46
VAPA-205ENST00000578314 TAF7Q15545 349 aaPredicted RBP30.43■■■□□ 2.46
VAPA-205ENST00000578314 TM4SF1P30408 202 aa30.42■■■□□ 2.46
VAPA-205ENST00000578314 TGFB2P61812 414 aa30.41■■■□□ 2.46
VAPA-205ENST00000578314 MAPK8IP3Q9UPT6 1336 aa30.41■■■□□ 2.46
VAPA-205ENST00000578314 DDR1Q08345 913 aa30.4■■■□□ 2.46
VAPA-205ENST00000578314 A0A087WZG4 1122 aa30.39■■■□□ 2.46
VAPA-205ENST00000578314 PRKRIP1Q9H875 184 aaPredicted RBP30.39■■■□□ 2.46
VAPA-205ENST00000578314 C10orf71Q711Q0 1435 aa30.39■■■□□ 2.45
VAPA-205ENST00000578314 KIF13BQ9NQT8 1826 aa30.38■■■□□ 2.45
VAPA-205ENST00000578314 SNRPA1P09661 255 aaKnown RBP30.37■■■□□ 2.45
VAPA-205ENST00000578314 IL6STP40189 918 aaPredicted RBP30.37■■■□□ 2.45
VAPA-205ENST00000578314 BCL2L12Q9HB09 334 aa30.37■■■□□ 2.45
VAPA-205ENST00000578314 USP16Q9Y5T5 823 aa30.37■■■□□ 2.45
VAPA-205ENST00000578314 POLRMTO00411 1230 aaKnown RBP30.36■■■□□ 2.45
VAPA-205ENST00000578314 A1BGP04217 495 aa30.36■■■□□ 2.45
VAPA-205ENST00000578314 PNISRQ8TF01 805 aaKnown RBP30.36■■■□□ 2.45
VAPA-205ENST00000578314 PXDNLA1KZ92 1463 aa30.34■■■□□ 2.45
VAPA-205ENST00000578314 WWC3Q9ULE0 1092 aa30.34■■■□□ 2.45
VAPA-205ENST00000578314 KIAA1551Q9HCM1 1747 aa30.33■■■□□ 2.45
VAPA-205ENST00000578314 PRAMEF22A3QJZ6 481 aa30.33■■■□□ 2.45
VAPA-205ENST00000578314 NFIXQ14938 502 aa30.33■■■□□ 2.45
VAPA-205ENST00000578314 MIS18AQ9NYP9 233 aa30.33■■■□□ 2.45
VAPA-205ENST00000578314 A0A0G2JLW4 131 aa30.32■■■□□ 2.44
VAPA-205ENST00000578314 THUMPD2Q9BTF0 503 aaKnown RBP30.31■■■□□ 2.44
VAPA-205ENST00000578314 DPEP1P16444 411 aa30.3■■■□□ 2.44
VAPA-205ENST00000578314 RIPK4P57078 832 aa30.3■■■□□ 2.44
VAPA-205ENST00000578314 N4BP2Q86UW6 1770 aaPredicted RBP30.29■■■□□ 2.44
VAPA-205ENST00000578314 TBC1D2BQ9UPU7 963 aa30.29■■■□□ 2.44
VAPA-205ENST00000578314 TMPOP42166 694 aaKnown RBP30.28■■■□□ 2.44
VAPA-205ENST00000578314 WDR43Q15061 677 aaKnown RBP eCLIP30.28■■■□□ 2.44
VAPA-205ENST00000578314 NPM2Q86SE8 214 aaKnown RBP30.28■■■□□ 2.44
VAPA-205ENST00000578314 ZNF330Q9Y3S2 320 aaPredicted RBP30.28■■■□□ 2.44
VAPA-205ENST00000578314 KCNA3P22001 575 aa30.27■■■□□ 2.44
VAPA-205ENST00000578314 C1QTNF8P60827 252 aa30.26■■■□□ 2.43
VAPA-205ENST00000578314 ADAMTS8Q9UP79 889 aa30.26■■■□□ 2.43
VAPA-205ENST00000578314 ATP10DQ9P241 1426 aa30.25■■■□□ 2.43
VAPA-205ENST00000578314 GIGYF1O75420 1035 aaPredicted RBP30.25■■■□□ 2.43
VAPA-205ENST00000578314 SERPINB2P05120 415 aa30.25■■■□□ 2.43
VAPA-205ENST00000578314 EIF4A1P60842 406 aaKnown RBP30.25■■■□□ 2.43
VAPA-205ENST00000578314 RUNDC1Q96C34 613 aa30.25■■■□□ 2.43
VAPA-205ENST00000578314 DLG5Q8TDM6 1919 aa30.25■■■□□ 2.43
VAPA-205ENST00000578314 CAMTA2O94983 1202 aa30.24■■■□□ 2.43
VAPA-205ENST00000578314 LMOD3Q0VAK6 560 aa30.24■■■□□ 2.43
VAPA-205ENST00000578314 ADCY9O60503 1353 aa30.24■■■□□ 2.43
VAPA-205ENST00000578314 NBPF26B4DH59 902 aa30.23■■■□□ 2.43
VAPA-205ENST00000578314 PIP4K2AP48426 406 aaPredicted RBP30.23■■■□□ 2.43
VAPA-205ENST00000578314 NBPF10Q6P3W6 841 aaKnown RBP30.23■■■□□ 2.43
VAPA-205ENST00000578314 CCDC146Q8IYE0 955 aa30.23■■■□□ 2.43
VAPA-205ENST00000578314 NBPF15Q8N660 670 aa30.23■■■□□ 2.43
VAPA-205ENST00000578314 TBC1D9BQ66K14 1250 aa30.22■■■□□ 2.43
VAPA-205ENST00000578314 DZIP3Q86Y13 1208 aaKnown RBP30.22■■■□□ 2.43
VAPA-205ENST00000578314 BCS1LQ9Y276 419 aa30.22■■■□□ 2.43
VAPA-205ENST00000578314 BICDL1Q6ZP65 573 aa30.21■■■□□ 2.43
VAPA-205ENST00000578314 BABAM1Q9NWV8 329 aa30.21■■■□□ 2.43
VAPA-205ENST00000578314 PIM2Q9P1W9 311 aa30.21■■■□□ 2.43
VAPA-205ENST00000578314 BRCA1P38398 1863 aaKnown RBP30.2■■■□□ 2.42
VAPA-205ENST00000578314 ZNF316A6NFI3 1004 aaPredicted RBP30.19■■■□□ 2.42
VAPA-205ENST00000578314 RRP7AQ9Y3A4 280 aaKnown RBP30.19■■■□□ 2.42
VAPA-205ENST00000578314 CHRNA5P30532 468 aa30.18■■■□□ 2.42
VAPA-205ENST00000578314 CLEC4GQ6UXB4 293 aa30.18■■■□□ 2.42
VAPA-205ENST00000578314 TSPYL4Q9UJ04 414 aa30.17■■■□□ 2.42
VAPA-205ENST00000578314 KDM3BQ7LBC6 1761 aa30.16■■■□□ 2.42
VAPA-205ENST00000578314 RGL2O15211 777 aa30.16■■■□□ 2.42
VAPA-205ENST00000578314 NEUROD2Q15784 382 aa30.16■■■□□ 2.42
VAPA-205ENST00000578314 TRIM35Q9UPQ4 493 aa30.16■■■□□ 2.42
VAPA-205ENST00000578314 NRXN2Q9P2S2 1712 aa30.16■■■□□ 2.42
VAPA-205ENST00000578314 DALRD3Q5D0E6 543 aaKnown RBP30.15■■■□□ 2.42
VAPA-205ENST00000578314 SETDB2Q96T68 719 aa30.15■■■□□ 2.42
VAPA-205ENST00000578314 CARMIL3Q8ND23 1372 aa30.15■■■□□ 2.42
VAPA-205ENST00000578314 SCN7AQ01118 1682 aa30.14■■■□□ 2.41
VAPA-205ENST00000578314 GPBP1L1Q9HC44 474 aaPredicted RBP30.13■■■□□ 2.41
VAPA-205ENST00000578314 PRR5LQ6MZQ0 368 aa30.12■■■□□ 2.41
VAPA-205ENST00000578314 ZNF652Q9Y2D9 606 aa30.12■■■□□ 2.41
VAPA-205ENST00000578314 SENP3-EIF4A1A0A087X0R7 540 aa30.11■■■□□ 2.41
VAPA-205ENST00000578314 BRIP1Q9BX63 1249 aa30.11■■■□□ 2.41
VAPA-205ENST00000578314 AFDNP55196 1824 aaKnown RBP30.1■■■□□ 2.41
VAPA-205ENST00000578314 ARFGEF1Q9Y6D6 1849 aa30.1■■■□□ 2.41
VAPA-205ENST00000578314 CHL1O00533 1208 aa30.1■■■□□ 2.41
VAPA-205ENST00000578314 ARHGAP27Q6ZUM4 889 aa30.1■■■□□ 2.41
VAPA-205ENST00000578314 ZNF526Q8TF50 670 aaPredicted RBP30.09■■■□□ 2.41
VAPA-205ENST00000578314 ERBB4Q15303 1308 aa30.08■■■□□ 2.41
VAPA-205ENST00000578314 C2CD5Q86YS7 1000 aa30.08■■■□□ 2.41
VAPA-205ENST00000578314 PDZRN3Q9UPQ7 1066 aa30.08■■■□□ 2.41
VAPA-205ENST00000578314 H0YIN7 160 aa30.07■■■□□ 2.4
VAPA-205ENST00000578314 PDE6BP35913 854 aa30.06■■■□□ 2.4
VAPA-205ENST00000578314 CNBD1Q8NA66 436 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms