RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 TATP17735 454 aaPredicted RBP11.47□□□□□ -0.57
SLC46A1-201ENST00000578217 TMF1P82094 1093 aa11.47□□□□□ -0.57
SLC46A1-201ENST00000578217 HDGFL2Q7Z4V5 671 aaPredicted RBP11.47□□□□□ -0.57
SLC46A1-201ENST00000578217 MYH14Q7Z406 1995 aaKnown RBP11.47□□□□□ -0.57
SLC46A1-201ENST00000578217 ROCK2O75116 1388 aaKnown RBP11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 CGNL1Q0VF96 1302 aa11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 DDR1Q08345 913 aa11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 HSP90AB2PQ58FF8 381 aa11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
SLC46A1-201ENST00000578217 KDM6AO15550 1401 aaPredicted RBP11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 ATP6V1AP38606 617 aa11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 IFNL1Q8IU54 200 aa11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 RNF25Q96BH1 459 aaPredicted RBP11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 ATG3Q9NT62 314 aa11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 CCDC87Q9NVE4 849 aa11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 PIM2Q9P1W9 311 aa11.45□□□□□ -0.58
SLC46A1-201ENST00000578217 TNRC18O15417 2968 aaPredicted RBP11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 KDRP35968 1356 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 POTEJP0CG39 1038 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 NKX1-1Q15270 411 aaPredicted RBP11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 DALRD3Q5D0E6 543 aaKnown RBP11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 NLGN1Q8N2Q7 840 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 COG3Q96JB2 828 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 PDE4DIPQ5VU43 2346 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
SLC46A1-201ENST00000578217 RTL1A6NKG5 1358 aa11.43□□□□□ -0.58
SLC46A1-201ENST00000578217 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
SLC46A1-201ENST00000578217 VEGFAP15692 232 aaPredicted RBP11.43□□□□□ -0.58
SLC46A1-201ENST00000578217 TRAPPC3LQ5T215 181 aa11.43□□□□□ -0.58
SLC46A1-201ENST00000578217 ABHD8Q96I13 439 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 PRDM10Q9NQV6 1147 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 TERF2IPQ9NYB0 399 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 PCDHB8Q9UN66 801 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 TRPC6Q9Y210 931 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 PARP3Q9Y6F1 533 aa11.42□□□□□ -0.58
SLC46A1-201ENST00000578217 COL5A3P25940 1745 aaPredicted RBP11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 TIAM2Q8IVF5 1701 aa11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 RGL2O15211 777 aa11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 LBX1P52954 281 aa11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 SIN3AQ96ST3 1273 aa11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 GGNBP2Q9H3C7 697 aa11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 RTCBQ9Y3I0 505 aaKnown RBP11.41□□□□□ -0.58
SLC46A1-201ENST00000578217 TMOD3Q9NYL9 352 aa11.4□□□□□ -0.58
SLC46A1-201ENST00000578217 NCAPD2Q15021 1401 aa11.4□□□□□ -0.58
SLC46A1-201ENST00000578217 INSRP06213 1382 aa11.4□□□□□ -0.59
SLC46A1-201ENST00000578217 CNTNAP1P78357 1384 aa11.4□□□□□ -0.59
SLC46A1-201ENST00000578217 NFKBIEO00221 500 aa11.39□□□□□ -0.59
SLC46A1-201ENST00000578217 FYB1O15117 783 aa11.39□□□□□ -0.59
SLC46A1-201ENST00000578217 HMGB2P26583 209 aaKnown RBP11.39□□□□□ -0.59
SLC46A1-201ENST00000578217 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
SLC46A1-201ENST00000578217 POLRMTO00411 1230 aaKnown RBP11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 RPS6KA4O75676 772 aa11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 LMNB1P20700 586 aa11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 RFC4P35249 363 aa11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 VEGFBP49765 207 aa11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 ADAMTS7Q9UKP4 1686 aa11.38□□□□□ -0.59
SLC46A1-201ENST00000578217 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 VIRMAQ69YN4 1812 aaKnown RBP11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 SMG6Q86US8 1419 aaKnown RBP11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 HSPA8P11142 646 aaKnown RBP11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 EMILIN1Q9Y6C2 1016 aa11.37□□□□□ -0.59
SLC46A1-201ENST00000578217 ZC3H4Q9UPT8 1303 aaKnown RBP11.36□□□□□ -0.59
SLC46A1-201ENST00000578217 PHKG2P15735 406 aa11.36□□□□□ -0.59
SLC46A1-201ENST00000578217 AFDNP55196 1824 aaKnown RBP11.36□□□□□ -0.59
SLC46A1-201ENST00000578217 ZNF831Q5JPB2 1677 aa11.36□□□□□ -0.59
SLC46A1-201ENST00000578217 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 POTEMA6NI47 508 aa11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 RIOK3O14730 519 aaKnown RBP11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 TM4SF1P30408 202 aa11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 FLT4P35916 1363 aa11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
SLC46A1-201ENST00000578217 DLEC1Q9Y238 1755 aa11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 CARMIL3Q8ND23 1372 aa11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 CRKLP46109 303 aaKnown RBP11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 RGS19P49795 217 aa11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 MLLT1Q03111 559 aaPredicted RBP11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 TESK2Q96S53 571 aa11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 EYA1Q99502 592 aa11.34□□□□□ -0.59
SLC46A1-201ENST00000578217 CCDC85CA6NKD9 419 aa11.33□□□□□ -0.6
SLC46A1-201ENST00000578217 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
SLC46A1-201ENST00000578217 SPG7Q9UQ90 795 aa11.33□□□□□ -0.6
SLC46A1-201ENST00000578217 TJP1Q07157 1748 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 DDNO94850 711 aaPredicted RBP11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 TIE1P35590 1138 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 NEUROD1Q13562 356 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 AIDAQ96BJ3 306 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 DICER1Q9UPY3 1922 aaKnown RBP11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 NRXN2Q9P2S2 1712 aa11.32□□□□□ -0.6
SLC46A1-201ENST00000578217 PTCD1O75127 700 aaKnown RBP11.31□□□□□ -0.6
SLC46A1-201ENST00000578217 ITGBL1O95965 494 aaPredicted RBP11.31□□□□□ -0.6
SLC46A1-201ENST00000578217 NFIXQ14938 502 aa11.31□□□□□ -0.6
SLC46A1-201ENST00000578217 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
SLC46A1-201ENST00000578217 INTS5Q6P9B9 1019 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms