RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 RGPD5Q99666 1765 aa21.51■■□□□ 1.03
ERBB2-205ENST00000578199 N4BP2Q86UW6 1770 aaPredicted RBP21.5■■□□□ 1.03
ERBB2-205ENST00000578199 POLA2Q14181 598 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 IL25Q9H293 177 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
ERBB2-205ENST00000578199 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 GOLGA6L3A6NEY3 463 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 RHPN1Q8TCX5 695 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
ERBB2-205ENST00000578199 ST18O60284 1047 aa21.49■■□□□ 1.03
ERBB2-205ENST00000578199 ANO2Q9NQ90 1003 aa21.49■■□□□ 1.03
ERBB2-205ENST00000578199 C1orf167Q5SNV9 1468 aa21.49■■□□□ 1.03
ERBB2-205ENST00000578199 XRCC6P12956 609 aaKnown RBP eCLIP21.49■■□□□ 1.03
ERBB2-205ENST00000578199 CWF19L2Q2TBE0 894 aaKnown RBP21.49■■□□□ 1.03
ERBB2-205ENST00000578199 C19orf44Q9H6X5 657 aa21.49■■□□□ 1.03
ERBB2-205ENST00000578199 TUBGCP6Q96RT7 1819 aa21.48■■□□□ 1.03
ERBB2-205ENST00000578199 SLC39A6Q13433 755 aa21.48■■□□□ 1.03
ERBB2-205ENST00000578199 CABLES1Q8TDN4 633 aa21.48■■□□□ 1.03
ERBB2-205ENST00000578199 NEK4P51957 841 aa21.48■■□□□ 1.03
ERBB2-205ENST00000578199 FSD2A1L4K1 749 aa21.47■■□□□ 1.03
ERBB2-205ENST00000578199 AIMP1Q12904 312 aaKnown RBP21.47■■□□□ 1.03
ERBB2-205ENST00000578199 L1TD1Q5T7N2 865 aaKnown RBP21.47■■□□□ 1.03
ERBB2-205ENST00000578199 NLRP2Q9NX02 1062 aa21.47■■□□□ 1.03
ERBB2-205ENST00000578199 TRPM3Q9HCF6 1732 aaPredicted RBP21.47■■□□□ 1.03
ERBB2-205ENST00000578199 ERBB3P21860 1342 aa21.47■■□□□ 1.03
ERBB2-205ENST00000578199 PANK2Q9BZ23 570 aa21.47■■□□□ 1.03
ERBB2-205ENST00000578199 NCAPD2Q15021 1401 aa21.45■■□□□ 1.02
ERBB2-205ENST00000578199 RAB11FIP3O75154 756 aa21.45■■□□□ 1.02
ERBB2-205ENST00000578199 NOL8Q76FK4 1167 aaKnown RBP21.45■■□□□ 1.02
ERBB2-205ENST00000578199 C9orf78Q9NZ63 289 aaPredicted RBP21.45■■□□□ 1.02
ERBB2-205ENST00000578199 BAG4O95429 457 aaKnown RBP21.44■■□□□ 1.02
ERBB2-205ENST00000578199 PI4K2BQ8TCG2 481 aa21.44■■□□□ 1.02
ERBB2-205ENST00000578199 KIF1BPQ96EK5 621 aa21.44■■□□□ 1.02
ERBB2-205ENST00000578199 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
ERBB2-205ENST00000578199 KSR2Q6VAB6 950 aa21.43■■□□□ 1.02
ERBB2-205ENST00000578199 OS9Q13438 667 aaPredicted RBP21.43■■□□□ 1.02
ERBB2-205ENST00000578199 HEG1Q9ULI3 1381 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 ATF3P18847 181 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 CHRNA2Q15822 529 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 NFATC2IPQ8NCF5 419 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 RAPGEF4Q8WZA2 1011 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 CHMP4AQ9BY43 222 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 CHAMP1Q96JM3 812 aa21.42■■□□□ 1.02
ERBB2-205ENST00000578199 MYL6BP14649 208 aa21.41■■□□□ 1.02
ERBB2-205ENST00000578199 MCTP1Q6DN14 999 aa21.4■■□□□ 1.02
ERBB2-205ENST00000578199 UPF3BQ9BZI7 483 aaKnown RBP21.4■■□□□ 1.02
ERBB2-205ENST00000578199 TMX3Q96JJ7 454 aa21.4■■□□□ 1.02
ERBB2-205ENST00000578199 CYP2E1P05181 493 aaPredicted RBP21.39■■□□□ 1.02
ERBB2-205ENST00000578199 PIP4K2AP48426 406 aaPredicted RBP21.39■■□□□ 1.02
ERBB2-205ENST00000578199 PDIA6Q15084 440 aa21.39■■□□□ 1.02
ERBB2-205ENST00000578199 FOXD4L5Q5VV16 416 aaPredicted RBP21.39■■□□□ 1.02
ERBB2-205ENST00000578199 GAS2L3Q86XJ1 694 aa21.39■■□□□ 1.02
ERBB2-205ENST00000578199 FOXD4L4Q8WXT5 416 aaPredicted RBP21.39■■□□□ 1.02
ERBB2-205ENST00000578199 TMEM94Q12767 1356 aa21.39■■□□□ 1.02
ERBB2-205ENST00000578199 CSB-PGBD3P0DP91 1061 aa21.39■■□□□ 1.01
ERBB2-205ENST00000578199 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
ERBB2-205ENST00000578199 ZDHHC9Q9Y397 364 aa21.39■■□□□ 1.01
ERBB2-205ENST00000578199 AOX1Q06278 1338 aa21.39■■□□□ 1.01
ERBB2-205ENST00000578199 MCCP23508 829 aa21.38■■□□□ 1.01
ERBB2-205ENST00000578199 NUCB2P80303 420 aa21.38■■□□□ 1.01
ERBB2-205ENST00000578199 HYPKQ9NX55 129 aa21.38■■□□□ 1.01
ERBB2-205ENST00000578199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.38■■□□□ 1.01
ERBB2-205ENST00000578199 CLEC17AQ6ZS10 378 aa21.37■■□□□ 1.01
ERBB2-205ENST00000578199 KAZALD1Q96I82 304 aa21.37■■□□□ 1.01
ERBB2-205ENST00000578199 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
ERBB2-205ENST00000578199 SLC52A2Q9HAB3 445 aa21.37■■□□□ 1.01
ERBB2-205ENST00000578199 CWC22Q9HCG8 908 aaKnown RBP21.37■■□□□ 1.01
ERBB2-205ENST00000578199 CAMTA1Q9Y6Y1 1673 aa21.37■■□□□ 1.01
ERBB2-205ENST00000578199 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 ALDH1L1O75891 902 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 PHKG2P15735 406 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 SKOR2Q2VWA4 1001 aaPredicted RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 DDX21Q9NR30 783 aaKnown RBP eCLIP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 KDM6AO15550 1401 aaPredicted RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 MST1RQ04912 1400 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 SIPA1L3O60292 1781 aaPredicted RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 GOLGA6L22H0YM25 854 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 TATP17735 454 aaPredicted RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 CWC27Q6UX04 472 aaKnown RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 DDX49Q9Y6V7 483 aaKnown RBP21.36■■□□□ 1.01
ERBB2-205ENST00000578199 OVOS2A0A0G2JMS6 1433 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 ALS2Q96Q42 1657 aa21.36■■□□□ 1.01
ERBB2-205ENST00000578199 GRPEL1Q9HAV7 217 aa21.35■■□□□ 1.01
ERBB2-205ENST00000578199 MTX1Q13505 466 aa21.35■■□□□ 1.01
ERBB2-205ENST00000578199 RIC3Q7Z5B4 369 aa21.35■■□□□ 1.01
ERBB2-205ENST00000578199 BICC1Q9H694 974 aaKnown RBP21.35■■□□□ 1.01
ERBB2-205ENST00000578199 KIF1AQ12756 1690 aa21.35■■□□□ 1.01
ERBB2-205ENST00000578199 MEGF6O75095 1541 aa21.35■■□□□ 1.01
ERBB2-205ENST00000578199 GRM8O00222 908 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 HSP90AB4PQ58FF6 505 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 LINS1Q8NG48 757 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 ZNF496Q96IT1 587 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-205ENST00000578199 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 CNTROBQ8N137 903 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 CLASRPQ8N2M8 674 aaKnown RBP21.34■■□□□ 1.01
ERBB2-205ENST00000578199 UBE2Q2Q8WVN8 375 aa21.34■■□□□ 1.01
ERBB2-205ENST00000578199 JARID2Q92833 1246 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-205ENST00000578199 MRE11P49959 708 aa21.33■■□□□ 1.01
ERBB2-205ENST00000578199 SGSM2O43147 1006 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms