RNA–Protein interactions for RNA: ENST00000578103.1

TTC19-209, Transcript of tetratricopeptide repeat domain 19, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TTC19, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-209ENST00000578103 NUDCQ9Y266 331 aa8.27□□□□□ -1.09
TTC19-209ENST00000578103 SSFA2P28290 1259 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 CABP4P57796 275 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 NEUROD2Q15784 382 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 GAS2L2Q8NHY3 880 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 ARXQ96QS3 562 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 KDM6AO15550 1401 aaPredicted RBP8.26□□□□□ -1.09
TTC19-209ENST00000578103 TOGARAM1Q9Y4F4 1720 aa8.26□□□□□ -1.09
TTC19-209ENST00000578103 MS4A4AQ96JQ5 239 aa8.25□□□□□ -1.09
TTC19-209ENST00000578103 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
TTC19-209ENST00000578103 PDGFDQ9GZP0 370 aaPredicted RBP8.25□□□□□ -1.09
TTC19-209ENST00000578103 ATG3Q9NT62 314 aa8.25□□□□□ -1.09
TTC19-209ENST00000578103 COL3A1P02461 1466 aaPredicted RBP8.25□□□□□ -1.09
TTC19-209ENST00000578103 ATP6V1AP38606 617 aa8.24□□□□□ -1.09
TTC19-209ENST00000578103 FXR2P51116 673 aaKnown RBP eCLIP8.24□□□□□ -1.09
TTC19-209ENST00000578103 ASAP1Q9ULH1 1129 aa8.24□□□□□ -1.09
TTC19-209ENST00000578103 MRC1P22897 1456 aa8.24□□□□□ -1.09
TTC19-209ENST00000578103 CNTNAP4Q9C0A0 1308 aa8.24□□□□□ -1.09
TTC19-209ENST00000578103 C5P01031 1676 aa8.24□□□□□ -1.09
TTC19-209ENST00000578103 U2SURPO15042 1029 aaKnown RBP8.23□□□□□ -1.09
TTC19-209ENST00000578103 HMOX1P09601 288 aa8.23□□□□□ -1.09
TTC19-209ENST00000578103 KCNQ4P56696 695 aa8.23□□□□□ -1.09
TTC19-209ENST00000578103 RC3H1Q5TC82 1133 aaKnown RBP8.23□□□□□ -1.09
TTC19-209ENST00000578103 FHDC1Q9C0D6 1143 aaPredicted RBP8.23□□□□□ -1.09
TTC19-209ENST00000578103 SLC52A2Q9HAB3 445 aa8.23□□□□□ -1.09
TTC19-209ENST00000578103 ZNF831Q5JPB2 1677 aa8.23□□□□□ -1.09
TTC19-209ENST00000578103 C4BP0C0L5 1744 aa8.23□□□□□ -1.09
TTC19-209ENST00000578103 ITGB4P16144 1822 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.22□□□□□ -1.09
TTC19-209ENST00000578103 NEFMP07197 916 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 PPP2R1AP30153 589 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 MFSD10Q14728 455 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 COL23A1Q86Y22 540 aaPredicted RBP8.22□□□□□ -1.09
TTC19-209ENST00000578103 LINC00116Q8NCU8 138 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 SYT17Q9BSW7 474 aa8.22□□□□□ -1.09
TTC19-209ENST00000578103 RTCBQ9Y3I0 505 aaKnown RBP8.22□□□□□ -1.09
TTC19-209ENST00000578103 GNAT3A8MTJ3 354 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 GNPATO15228 680 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
TTC19-209ENST00000578103 FCHSD2O94868 740 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 ZEB1P37275 1124 aaPredicted RBP8.21□□□□□ -1.1
TTC19-209ENST00000578103 ITPK1Q13572 414 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 RALBP1Q15311 655 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 NFATC2IPQ8NCF5 419 aa8.21□□□□□ -1.1
TTC19-209ENST00000578103 PNNQ9H307 717 aaKnown RBP8.21□□□□□ -1.1
TTC19-209ENST00000578103 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 ZMYND10O75800 440 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 U2AF1L5P0DN76 240 aaPredicted RBP8.2□□□□□ -1.1
TTC19-209ENST00000578103 PDE4AP27815 886 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 U2AF1Q01081 240 aaKnown RBP eCLIP8.2□□□□□ -1.1
TTC19-209ENST00000578103 TEFQ10587 303 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 MTHFSDQ2M296 383 aaKnown RBP8.2□□□□□ -1.1
TTC19-209ENST00000578103 TRAPPC3LQ5T215 181 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 CD2APQ9Y5K6 639 aa8.2□□□□□ -1.1
TTC19-209ENST00000578103 CICQ96RK0 1608 aaPredicted RBP8.2□□□□□ -1.1
TTC19-209ENST00000578103 HTATSF1O43719 755 aaKnown RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 PTCD1O75127 700 aaKnown RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 RPS6KA4O75676 772 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 PHF14O94880 888 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 PRKAR2BP31323 418 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 CNGB1Q14028 1251 aaPredicted RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 TTC5Q8N0Z6 440 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 NLGN1Q8N2Q7 840 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 RTF1Q92541 710 aaKnown RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 PHF12Q96QT6 1004 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 TEX13AQ9BXU3 409 aaPredicted RBP8.19□□□□□ -1.1
TTC19-209ENST00000578103 RSPH6AQ9H0K4 717 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 CEMIPQ8WUJ3 1361 aa8.19□□□□□ -1.1
TTC19-209ENST00000578103 ADAMTS7Q9UKP4 1686 aa8.18□□□□□ -1.1
TTC19-209ENST00000578103 TUBGCP6Q96RT7 1819 aa8.18□□□□□ -1.1
TTC19-209ENST00000578103 GRIN3BO60391 1043 aa8.18□□□□□ -1.1
TTC19-209ENST00000578103 STARD3NLO95772 234 aa8.18□□□□□ -1.1
TTC19-209ENST00000578103 RFC4P35249 363 aa8.18□□□□□ -1.1
TTC19-209ENST00000578103 SCN11AQ9UI33 1791 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 CRKLP46109 303 aaKnown RBP8.17□□□□□ -1.1
TTC19-209ENST00000578103 MSL1Q68DK7 614 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 SMYD5Q6GMV2 418 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 LGR6Q9HBX8 967 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 CCDC87Q9NVE4 849 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
TTC19-209ENST00000578103 YY1P25490 414 aa8.16□□□□□ -1.1
TTC19-209ENST00000578103 UTRNP46939 3433 aa8.16□□□□□ -1.1
TTC19-209ENST00000578103 GPR162Q16538 588 aa8.16□□□□□ -1.1
TTC19-209ENST00000578103 ZNF790Q6PG37 636 aa8.16□□□□□ -1.1
TTC19-209ENST00000578103 FMNL2Q96PY5 1086 aa8.16□□□□□ -1.1
TTC19-209ENST00000578103 MYBBP1AQ9BQG0 1328 aaKnown RBP8.16□□□□□ -1.1
TTC19-209ENST00000578103 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
TTC19-209ENST00000578103 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.1
TTC19-209ENST00000578103 KCPQ6ZWJ8 1503 aa8.15□□□□□ -1.1
TTC19-209ENST00000578103 SOS1Q07889 1333 aaPredicted RBP8.15□□□□□ -1.1
TTC19-209ENST00000578103 MAPK8IP3Q9UPT6 1336 aa8.15□□□□□ -1.1
TTC19-209ENST00000578103 A0A087WZG4 1122 aa8.15□□□□□ -1.1
TTC19-209ENST00000578103 ZPR1O75312 459 aa8.15□□□□□ -1.1
TTC19-209ENST00000578103 MMP10P09238 476 aa8.15□□□□□ -1.1
TTC19-209ENST00000578103 CYP19A1P11511 503 aaPredicted RBP8.15□□□□□ -1.1
TTC19-209ENST00000578103 CAMK2BQ13554 666 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms