RNA–Protein interactions for RNA: ENST00000578006.5

RHBDL3-205, Transcript of rhomboid like 3, humanhuman

TSL 1 (best)

Gene RHBDL3, Length 1,341 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-205ENST00000578006 CD2APQ9Y5K6 639 aa26.87■■□□□ 1.89
RHBDL3-205ENST00000578006 KCNQ3O43525 872 aa26.86■■□□□ 1.89
RHBDL3-205ENST00000578006 PNISRQ8TF01 805 aaKnown RBP26.86■■□□□ 1.89
RHBDL3-205ENST00000578006 MMP10P09238 476 aa26.85■■□□□ 1.89
RHBDL3-205ENST00000578006 KIF13BQ9NQT8 1826 aa26.84■■□□□ 1.89
RHBDL3-205ENST00000578006 LAMB4A4D0S4 1761 aa26.84■■□□□ 1.89
RHBDL3-205ENST00000578006 LMOD3Q0VAK6 560 aa26.84■■□□□ 1.89
RHBDL3-205ENST00000578006 RUNDC1Q96C34 613 aa26.84■■□□□ 1.89
RHBDL3-205ENST00000578006 TMPOP42166 694 aaKnown RBP26.83■■□□□ 1.89
RHBDL3-205ENST00000578006 RIPK4P57078 832 aa26.83■■□□□ 1.89
RHBDL3-205ENST00000578006 NLGN2Q8NFZ4 835 aa26.83■■□□□ 1.89
RHBDL3-205ENST00000578006 ZPR1O75312 459 aa26.82■■□□□ 1.88
RHBDL3-205ENST00000578006 SRP68Q9UHB9 627 aaKnown RBP26.82■■□□□ 1.88
RHBDL3-205ENST00000578006 ADAMTS8Q9UP79 889 aa26.82■■□□□ 1.88
RHBDL3-205ENST00000578006 UTRNP46939 3433 aa26.81■■□□□ 1.88
RHBDL3-205ENST00000578006 SNRPA1P09661 255 aaKnown RBP26.81■■□□□ 1.88
RHBDL3-205ENST00000578006 CANXP27824 592 aaKnown RBP26.81■■□□□ 1.88
RHBDL3-205ENST00000578006 CCDC146Q8IYE0 955 aa26.8■■□□□ 1.88
RHBDL3-205ENST00000578006 NARFQ9UHQ1 456 aa26.8■■□□□ 1.88
RHBDL3-205ENST00000578006 A0A087WZG4 1122 aa26.79■■□□□ 1.88
RHBDL3-205ENST00000578006 EIF5P55010 431 aaKnown RBP26.79■■□□□ 1.88
RHBDL3-205ENST00000578006 THUMPD2Q9BTF0 503 aaKnown RBP26.79■■□□□ 1.88
RHBDL3-205ENST00000578006 SCN7AQ01118 1682 aa26.79■■□□□ 1.88
RHBDL3-205ENST00000578006 GOLGB1Q14789 3259 aaKnown RBP26.78■■□□□ 1.88
RHBDL3-205ENST00000578006 CHD4Q14839 1912 aa26.78■■□□□ 1.88
RHBDL3-205ENST00000578006 IL6STP40189 918 aaPredicted RBP26.78■■□□□ 1.88
RHBDL3-205ENST00000578006 PARP3Q9Y6F1 533 aa26.78■■□□□ 1.88
RHBDL3-205ENST00000578006 ANP32CO43423 234 aa26.77■■□□□ 1.88
RHBDL3-205ENST00000578006 FKBP8Q14318 412 aa26.77■■□□□ 1.88
RHBDL3-205ENST00000578006 USPL1Q5W0Q7 1092 aa26.77■■□□□ 1.88
RHBDL3-205ENST00000578006 MIS18AQ9NYP9 233 aa26.76■■□□□ 1.87
RHBDL3-205ENST00000578006 USP16Q9Y5T5 823 aa26.76■■□□□ 1.87
RHBDL3-205ENST00000578006 C10orf71Q711Q0 1435 aa26.76■■□□□ 1.87
RHBDL3-205ENST00000578006 GPR162Q16538 588 aa26.75■■□□□ 1.87
RHBDL3-205ENST00000578006 NPM2Q86SE8 214 aaKnown RBP26.75■■□□□ 1.87
RHBDL3-205ENST00000578006 BCORQ6W2J9 1755 aa26.74■■□□□ 1.87
RHBDL3-205ENST00000578006 A1BGP04217 495 aa26.74■■□□□ 1.87
RHBDL3-205ENST00000578006 BABAM1Q9NWV8 329 aa26.74■■□□□ 1.87
RHBDL3-205ENST00000578006 PRAMEF22A3QJZ6 481 aa26.73■■□□□ 1.87
RHBDL3-205ENST00000578006 RRP7AQ9Y3A4 280 aaKnown RBP26.73■■□□□ 1.87
RHBDL3-205ENST00000578006 KIAA1551Q9HCM1 1747 aa26.73■■□□□ 1.87
RHBDL3-205ENST00000578006 AFDNP55196 1824 aaKnown RBP26.72■■□□□ 1.87
RHBDL3-205ENST00000578006 NEUROD2Q15784 382 aa26.72■■□□□ 1.87
RHBDL3-205ENST00000578006 EIF4A1P60842 406 aaKnown RBP26.71■■□□□ 1.87
RHBDL3-205ENST00000578006 TSPYL4Q9UJ04 414 aa26.71■■□□□ 1.87
RHBDL3-205ENST00000578006 ZNF330Q9Y3S2 320 aaPredicted RBP26.71■■□□□ 1.87
RHBDL3-205ENST00000578006 NRXN2Q9P2S2 1712 aa26.71■■□□□ 1.87
RHBDL3-205ENST00000578006 TM4SF1P30408 202 aa26.7■■□□□ 1.87
RHBDL3-205ENST00000578006 DDR1Q08345 913 aa26.7■■□□□ 1.87
RHBDL3-205ENST00000578006 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.87
RHBDL3-205ENST00000578006 BCL2L12Q9HB09 334 aa26.7■■□□□ 1.87
RHBDL3-205ENST00000578006 N4BP2Q86UW6 1770 aaPredicted RBP26.7■■□□□ 1.86
RHBDL3-205ENST00000578006 GIGYF1O75420 1035 aaPredicted RBP26.69■■□□□ 1.86
RHBDL3-205ENST00000578006 PXDNLA1KZ92 1463 aa26.68■■□□□ 1.86
RHBDL3-205ENST00000578006 POLRMTO00411 1230 aaKnown RBP26.68■■□□□ 1.86
RHBDL3-205ENST00000578006 TGFB2P61812 414 aa26.68■■□□□ 1.86
RHBDL3-205ENST00000578006 TRIM35Q9UPQ4 493 aa26.68■■□□□ 1.86
RHBDL3-205ENST00000578006 GRIN3BO60391 1043 aa26.66■■□□□ 1.86
RHBDL3-205ENST00000578006 BRCA1P38398 1863 aaKnown RBP26.66■■□□□ 1.86
RHBDL3-205ENST00000578006 NFIXQ14938 502 aa26.66■■□□□ 1.86
RHBDL3-205ENST00000578006 TBC1D2BQ9UPU7 963 aa26.66■■□□□ 1.86
RHBDL3-205ENST00000578006 YY1P25490 414 aa26.65■■□□□ 1.86
RHBDL3-205ENST00000578006 CCDC184Q52MB2 194 aa26.65■■□□□ 1.86
RHBDL3-205ENST00000578006 DZIP3Q86Y13 1208 aaKnown RBP26.65■■□□□ 1.86
RHBDL3-205ENST00000578006 YBX3P16989 372 aaKnown RBP eCLIP26.65■■□□□ 1.86
RHBDL3-205ENST00000578006 NBPF26B4DH59 902 aa26.64■■□□□ 1.85
RHBDL3-205ENST00000578006 PIP4K2AP48426 406 aaPredicted RBP26.64■■□□□ 1.85
RHBDL3-205ENST00000578006 NBPF10Q6P3W6 841 aaKnown RBP26.64■■□□□ 1.85
RHBDL3-205ENST00000578006 NBPF15Q8N660 670 aa26.64■■□□□ 1.85
RHBDL3-205ENST00000578006 MRS2Q9HD23 443 aa26.64■■□□□ 1.85
RHBDL3-205ENST00000578006 APAF1O14727 1248 aa26.63■■□□□ 1.85
RHBDL3-205ENST00000578006 CAMTA2O94983 1202 aa26.63■■□□□ 1.85
RHBDL3-205ENST00000578006 RGL2O15211 777 aa26.62■■□□□ 1.85
RHBDL3-205ENST00000578006 ERBB4Q15303 1308 aa26.61■■□□□ 1.85
RHBDL3-205ENST00000578006 CHL1O00533 1208 aa26.61■■□□□ 1.85
RHBDL3-205ENST00000578006 CARMIL3Q8ND23 1372 aa26.6■■□□□ 1.85
RHBDL3-205ENST00000578006 SERPINB2P05120 415 aa26.6■■□□□ 1.85
RHBDL3-205ENST00000578006 TBC1D9BQ66K14 1250 aa26.6■■□□□ 1.85
RHBDL3-205ENST00000578006 CLEC4GQ6UXB4 293 aa26.6■■□□□ 1.85
RHBDL3-205ENST00000578006 ZNF652Q9Y2D9 606 aa26.6■■□□□ 1.85
RHBDL3-205ENST00000578006 CALD1Q05682 793 aaKnown RBP26.59■■□□□ 1.85
RHBDL3-205ENST00000578006 BICDL1Q6ZP65 573 aa26.59■■□□□ 1.85
RHBDL3-205ENST00000578006 ARFGEF1Q9Y6D6 1849 aa26.58■■□□□ 1.85
RHBDL3-205ENST00000578006 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
RHBDL3-205ENST00000578006 DLEC1Q9Y238 1755 aa26.58■■□□□ 1.85
RHBDL3-205ENST00000578006 A0A0G2JLW4 131 aa26.57■■□□□ 1.84
RHBDL3-205ENST00000578006 DPEP1P16444 411 aa26.57■■□□□ 1.84
RHBDL3-205ENST00000578006 LAS1LQ9Y4W2 734 aaKnown RBP26.57■■□□□ 1.84
RHBDL3-205ENST00000578006 SETDB2Q96T68 719 aa26.56■■□□□ 1.84
RHBDL3-205ENST00000578006 NUP98P52948 1817 aa26.55■■□□□ 1.84
RHBDL3-205ENST00000578006 ANKRD31Q8N7Z5 1873 aa26.54■■□□□ 1.84
RHBDL3-205ENST00000578006 IFT57Q9NWB7 429 aa26.53■■□□□ 1.84
RHBDL3-205ENST00000578006 WWC3Q9ULE0 1092 aa26.53■■□□□ 1.84
RHBDL3-205ENST00000578006 HOXB7P09629 217 aa26.52■■□□□ 1.84
RHBDL3-205ENST00000578006 MYL6BP14649 208 aa26.52■■□□□ 1.84
RHBDL3-205ENST00000578006 KIF6Q6ZMV9 814 aa26.52■■□□□ 1.84
RHBDL3-205ENST00000578006 PIM2Q9P1W9 311 aa26.52■■□□□ 1.84
RHBDL3-205ENST00000578006 ERVV-1B6SEH8 477 aa26.51■■□□□ 1.83
RHBDL3-205ENST00000578006 ZNF853P0CG23 659 aa26.51■■□□□ 1.83
RHBDL3-205ENST00000578006 EIF2S2P20042 333 aaKnown RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms