RNA–Protein interactions for RNA: ENST00000577939.1

SUPT6H-204, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-204ENST00000577939 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
SUPT6H-204ENST00000577939 HTATSF1O43719 755 aaKnown RBP13.49□□□□□ -0.25
SUPT6H-204ENST00000577939 ZEB1P37275 1124 aaPredicted RBP13.49□□□□□ -0.25
SUPT6H-204ENST00000577939 ZNF790Q6PG37 636 aa13.49□□□□□ -0.25
SUPT6H-204ENST00000577939 DLEC1Q9Y238 1755 aa13.49□□□□□ -0.25
SUPT6H-204ENST00000577939 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 A0A087WZG4 1122 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 GYS1P13807 737 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 SMIM5Q71RC9 77 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 PXDNLA1KZ92 1463 aa13.48□□□□□ -0.25
SUPT6H-204ENST00000577939 MYBBP1AQ9BQG0 1328 aaKnown RBP13.47□□□□□ -0.25
SUPT6H-204ENST00000577939 CYP19A1P11511 503 aaPredicted RBP13.47□□□□□ -0.25
SUPT6H-204ENST00000577939 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
SUPT6H-204ENST00000577939 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.25
SUPT6H-204ENST00000577939 IL17REQ8NFR9 667 aa13.46□□□□□ -0.25
SUPT6H-204ENST00000577939 ZBTB1Q9Y2K1 713 aa13.46□□□□□ -0.25
SUPT6H-204ENST00000577939 TGFB2P61812 414 aa13.45□□□□□ -0.26
SUPT6H-204ENST00000577939 DDX10Q13206 875 aaKnown RBP13.45□□□□□ -0.26
SUPT6H-204ENST00000577939 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
SUPT6H-204ENST00000577939 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
SUPT6H-204ENST00000577939 NARFQ9UHQ1 456 aa13.45□□□□□ -0.26
SUPT6H-204ENST00000577939 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
SUPT6H-204ENST00000577939 LMOD3Q0VAK6 560 aa13.44□□□□□ -0.26
SUPT6H-204ENST00000577939 SRP68Q9UHB9 627 aaKnown RBP13.44□□□□□ -0.26
SUPT6H-204ENST00000577939 YBX3P16989 372 aaKnown RBP eCLIP13.43□□□□□ -0.26
SUPT6H-204ENST00000577939 IL6STP40189 918 aaPredicted RBP13.43□□□□□ -0.26
SUPT6H-204ENST00000577939 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
SUPT6H-204ENST00000577939 MCM10Q7L590 875 aa13.43□□□□□ -0.26
SUPT6H-204ENST00000577939 ZNF330Q9Y3S2 320 aaPredicted RBP13.43□□□□□ -0.26
SUPT6H-204ENST00000577939 SNRPA1P09661 255 aaKnown RBP13.42□□□□□ -0.26
SUPT6H-204ENST00000577939 FKBP8Q14318 412 aa13.42□□□□□ -0.26
SUPT6H-204ENST00000577939 WDR43Q15061 677 aaKnown RBP eCLIP13.42□□□□□ -0.264e-6■□□□□ 9.3
SUPT6H-204ENST00000577939 USPL1Q5W0Q7 1092 aa13.42□□□□□ -0.26
SUPT6H-204ENST00000577939 ZNF784Q8NCA9 323 aaPredicted RBP13.41□□□□□ -0.26
SUPT6H-204ENST00000577939 CACNA1SQ13698 1873 aa13.41□□□□□ -0.26
SUPT6H-204ENST00000577939 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
SUPT6H-204ENST00000577939 ARFGEF2Q9Y6D5 1785 aa13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 POLRMTO00411 1230 aaKnown RBP13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 NPHP1O15259 732 aa13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 EIF5P55010 431 aaKnown RBP13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
SUPT6H-204ENST00000577939 DDR1Q08345 913 aa13.39□□□□□ -0.27
SUPT6H-204ENST00000577939 BCS1LQ9Y276 419 aa13.39□□□□□ -0.27
SUPT6H-204ENST00000577939 NUP98P52948 1817 aa13.39□□□□□ -0.27
SUPT6H-204ENST00000577939 DCTN1Q14203 1278 aa13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 PLEKHF1Q96S99 279 aa13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 PDZRN3Q9UPQ7 1066 aa13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 COL11A2P13942 1736 aaPredicted RBP13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 ATP10DQ9P241 1426 aa13.38□□□□□ -0.27
SUPT6H-204ENST00000577939 DPEP1P16444 411 aa13.37□□□□□ -0.27
SUPT6H-204ENST00000577939 NFIXQ14938 502 aa13.37□□□□□ -0.27
SUPT6H-204ENST00000577939 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
SUPT6H-204ENST00000577939 ADCY9O60503 1353 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 SBF1O95248 1867 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 A0A0G2JLW4 131 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 RGL2O15211 777 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 GIGYF1O75420 1035 aaPredicted RBP13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 TM4SF1P30408 202 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 DALRD3Q5D0E6 543 aaKnown RBP13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 DZIP3Q86Y13 1208 aaKnown RBP13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 TIAM2Q8IVF5 1701 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
SUPT6H-204ENST00000577939 KCNQ3O43525 872 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 A1BGP04217 495 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 SERPINB2P05120 415 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 ST5P78524 1137 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 BABAM1Q9NWV8 329 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 ERBB4Q15303 1308 aa13.35□□□□□ -0.27
SUPT6H-204ENST00000577939 TNRC6CQ9HCJ0 1690 aaKnown RBP13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 RIPK4P57078 832 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 CNBD1Q8NA66 436 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 SETDB2Q96T68 719 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 TSPYL4Q9UJ04 414 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
SUPT6H-204ENST00000577939 DICER1Q9UPY3 1922 aaKnown RBP13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 CAMTA2O94983 1202 aa13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 KIF6Q6ZMV9 814 aa13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 RUNDC1Q96C34 613 aa13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 BCL2L12Q9HB09 334 aa13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 GPBP1L1Q9HC44 474 aaPredicted RBP13.33□□□□□ -0.28
SUPT6H-204ENST00000577939 H0YIN7 160 aa13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 PDE6BP35913 854 aa13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 TMPOP42166 694 aaKnown RBP13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 ARHGAP27Q6ZUM4 889 aa13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
SUPT6H-204ENST00000577939 FER1L6Q2WGJ9 1857 aa13.31□□□□□ -0.28
SUPT6H-204ENST00000577939 EIF4A1P60842 406 aaKnown RBP13.31□□□□□ -0.28
SUPT6H-204ENST00000577939 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
SUPT6H-204ENST00000577939 C2CD5Q86YS7 1000 aa13.31□□□□□ -0.28
SUPT6H-204ENST00000577939 THUMPD2Q9BTF0 503 aaKnown RBP13.31□□□□□ -0.28
SUPT6H-204ENST00000577939 PRAMEF22A3QJZ6 481 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms