RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 EP400NLQ6ZTU2 488 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 NUP133Q8WUM0 1156 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 MYD88Q99836 296 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 SPC25Q9HBM1 224 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 HYPKQ9NX55 129 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 FBXO3Q9UK99 471 aa3.49□□□□□ -1.85
SMCHD1-203ENST00000577880 ACEP12821 1306 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 BECN2A8MW95 431 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 LDHAL6AQ6ZMR3 332 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 SIRT1Q96EB6 747 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC97Q96F63 343 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 PICK1Q9NRD5 415 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 SLC5A4Q9NY91 659 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 EFCAB5A4FU69 1503 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC7Q96M83 1385 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 IQGAP2Q13576 1575 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 HECW1Q76N89 1606 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 GIGYF1O75420 1035 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 GLRX3O76003 335 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 TNNT3P45378 269 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 BMS1Q14692 1282 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 DBF4Q9UBU7 674 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 TTC21BQ7Z4L5 1316 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 ARHGEF10O15013 1369 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 ALDH1B1P30837 517 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 NCBP1Q09161 790 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 LRSAM1Q6UWE0 723 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 NME9Q86XW9 330 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 ZNF428Q96B54 188 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 UTP14AQ9BVJ6 771 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 SPON1Q9HCB6 807 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 SPINK5Q9NQ38 1064 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 TMOD4Q9NZQ9 345 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 MINDY4BA8MYZ0 360 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 F8W031 263 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 RBM6P78332 1123 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 PLS1Q14651 629 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 TAF12Q16514 161 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 FAM161AQ3B820 660 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 DZIP3Q86Y13 1208 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 SULF1Q8IWU6 871 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 NLGN1Q8N2Q7 840 aa3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 DCPSQ96C86 337 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 CWC25Q9NXE8 425 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 NOL7Q9UMY1 257 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-203ENST00000577880 ABCA10Q8WWZ4 1543 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 GOLGA6L19H0YKK7 550 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 SSBP05455 408 aaKnown RBP eCLIP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 APLP1P51693 650 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 CNKSR1Q969H4 720 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 COG6Q9Y2V7 657 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 PPEF1O14829 653 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 RIMBP2O15034 1052 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 INTS3Q68E01 1043 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 IQCA1Q86XH1 822 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 SMCR8Q8TEV9 937 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 ANKRD2Q9GZV1 360 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 ATF5Q9Y2D1 282 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 CSADQ9Y600 493 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 RIMS2Q9UQ26 1411 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 ZNF518AQ6AHZ1 1483 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 SRGAP3O43295 1099 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 GRIN3BO60391 1043 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 GCP02774 474 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 PLCG2P16885 1265 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 NBPF1Q3BBV0 1214 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 CCDC70Q6NSX1 233 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 TNPO1Q92973 898 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 FERMT2Q96AC1 680 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 SH2D4AQ9H788 454 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 NPATQ14207 1427 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 FAM135BQ49AJ0 1406 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 TNS2Q63HR2 1409 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 RUSC2Q8N2Y8 1516 aa3.47□□□□□ -1.85
SMCHD1-203ENST00000577880 CTCFLQ8NI51 663 aaPredicted RBP3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 NAPBQ9H115 298 aa3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 RNF41Q9H4P4 317 aaPredicted RBP3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 SMC3Q9UQE7 1217 aa3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 SPATA31A6Q5VVP1 1343 aa3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 PCDH11XQ9BZA7 1347 aa3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 PCDH11YQ9BZA8 1340 aa3.46□□□□□ -1.85
SMCHD1-203ENST00000577880 PPP1R12BO60237 982 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 KDM4AO75164 1064 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 CDKL5O76039 1030 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 TRIM37O94972 964 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 POTEJP0CG39 1038 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 PDE4BQ07343 736 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 PABPC4Q13310 644 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 TNFAIP1Q13829 316 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 MVPQ14764 893 aaKnown RBP3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 DPP8Q6V1X1 898 aaPredicted RBP3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 CCDC73Q6ZRK6 1079 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 AACSQ86V21 672 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 CHMP5Q9NZZ3 219 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 CFAP74Q9C0B2 1584 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 EHBP1L1Q8N3D4 1523 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 ARHGEF12Q9NZN5 1544 aa3.46□□□□□ -1.86
SMCHD1-203ENST00000577880 A2MP01023 1474 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms