RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 KRT24Q2M2I5 525 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 MYD88Q99836 296 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 ESYT1Q9BSJ8 1104 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 PRKCSHP14314 528 aaPredicted RBP12.81□□□□□ -0.36
RNF43-203ENST00000577716 SMARCE1Q969G3 411 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 NACAP1Q9BZK3 213 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 PDCL3Q9H2J4 239 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 UBE2HP62256 183 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 GUCY1B3Q02153 619 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 RUFY1Q96T51 708 aa12.81□□□□□ -0.36
RNF43-203ENST00000577716 NUP133Q8WUM0 1156 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 CDKL5O76039 1030 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
RNF43-203ENST00000577716 AMOTQ4VCS5 1084 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 PLEKHM2Q8IWE5 1019 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
RNF43-203ENST00000577716 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
RNF43-203ENST00000577716 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
RNF43-203ENST00000577716 TXLNAP40222 546 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PTPN14Q15678 1187 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PPFIBP1Q86W92 1011 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 CAGE1Q8TC20 777 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PRDM11Q9NQV5 511 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 ANO10Q9NW15 660 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PIK3R4Q99570 1358 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PRIM1P49642 420 aaKnown RBP12.79□□□□□ -0.36
RNF43-203ENST00000577716 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 ZGPATQ8N5A5 531 aaKnown RBP12.79□□□□□ -0.36
RNF43-203ENST00000577716 DDX19AQ9NUU7 478 aaKnown RBP12.79□□□□□ -0.36
RNF43-203ENST00000577716 CBFA2T2O43439 604 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 PTCD1O75127 700 aaKnown RBP12.79□□□□□ -0.36
RNF43-203ENST00000577716 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.364e-8■■■■□ 21.6
RNF43-203ENST00000577716 CEP85Q6P2H3 762 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
RNF43-203ENST00000577716 OFD1O75665 1012 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 ANAPC15P60006 121 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 GIMAP6Q6P9H5 292 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 MPHOSPH8Q99549 860 aa12.79□□□□□ -0.36
RNF43-203ENST00000577716 FOXO3O43524 673 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 IFIT1P09914 478 aaKnown RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 BLMP54132 1417 aaPredicted RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 DACH1Q9UI36 760 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 MAP3K2Q9Y2U5 619 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 A0A1W2PP64 1363 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 SMTNL1A8MU46 457 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 ZSCAN22P10073 491 aaPredicted RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 ZNF165P49910 485 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 EIF4A2Q14240 407 aaKnown RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 HYPKQ9NX55 129 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 CLIP2Q9UDT6 1046 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 INSRP06213 1382 aa12.78□□□□□ -0.36
RNF43-203ENST00000577716 SETQ01105 290 aaPredicted RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 C16orf45Q96MC5 204 aaPredicted RBP12.78□□□□□ -0.36
RNF43-203ENST00000577716 PIP4K2AP48426 406 aaPredicted RBP12.77□□□□□ -0.36
RNF43-203ENST00000577716 RBM25P49756 843 aaKnown RBP12.77□□□□□ -0.36
RNF43-203ENST00000577716 ATP8B2P98198 1209 aa12.77□□□□□ -0.36
RNF43-203ENST00000577716 AK7Q96M32 723 aa12.77□□□□□ -0.36
RNF43-203ENST00000577716 CCT2P78371 535 aaKnown RBP12.77□□□□□ -0.37
RNF43-203ENST00000577716 UVSSAQ2YD98 709 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 NECAB1Q8N987 351 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 C8orf76Q96K31 380 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 TCEANC2Q96MN5 208 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 A0A087WZG4 1122 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 UBXN4Q92575 508 aa12.77□□□□□ -0.37
RNF43-203ENST00000577716 ERCC4Q92889 916 aaPredicted RBP12.77□□□□□ -0.37
RNF43-203ENST00000577716 TDO2P48775 406 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 ABCA8O94911 1581 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 MAST1Q9Y2H9 1570 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 HMGB1P09429 215 aaKnown RBP12.76□□□□□ -0.37
RNF43-203ENST00000577716 TNNT1P13805 278 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 CBX1P83916 185 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 USP48Q86UV5 1035 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 TRIM34Q9BYJ4 488 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 CNPY2Q9Y2B0 182 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 KIF18AQ8NI77 898 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 ADGBQ8N7X0 1667 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 ZNF830Q96NB3 372 aaPredicted RBP12.76□□□□□ -0.37
RNF43-203ENST00000577716 UBAC1Q9BSL1 405 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 USP26Q9BXU7 913 aa12.76□□□□□ -0.37
RNF43-203ENST00000577716 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
RNF43-203ENST00000577716 CTAGE5O15320 804 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 FSIP1Q8NA03 581 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 PRDM10Q9NQV6 1147 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.75□□□□□ -0.37
RNF43-203ENST00000577716 KIF2AO00139 706 aaPredicted RBP12.75□□□□□ -0.37
RNF43-203ENST00000577716 NCBP3Q53F19 620 aaKnown RBP12.75□□□□□ -0.37
RNF43-203ENST00000577716 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 GNL3LQ9NVN8 582 aaKnown RBP12.75□□□□□ -0.37
RNF43-203ENST00000577716 TRIM35Q9UPQ4 493 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 PPFIA3O75145 1194 aa12.75□□□□□ -0.37
RNF43-203ENST00000577716 SLC3A2P08195 630 aaKnown RBP12.75□□□□□ -0.37
RNF43-203ENST00000577716 TRMT1Q9NXH9 659 aaKnown RBP12.75□□□□□ -0.37
RNF43-203ENST00000577716 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms