RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PRIM1P49642 420 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TRMT2AQ8IZ69 625 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RTF1Q92541 710 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
CDK5RAP3-204ENST00000577664 DOT1LQ8TEK3 1739 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ZNF853P0CG23 659 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 NEUROD2Q15784 382 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 C9orf131Q5VYM1 1079 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ABHD8Q96I13 439 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 LGR6Q9HBX8 967 aa14.56□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TGFB2P61812 414 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 DDX54Q8TDD1 881 aaKnown RBP14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 KDM6AO15550 1401 aaPredicted RBP14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TOGARAM1Q9Y4F4 1720 aa14.55□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CHL1O00533 1208 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MPRIPQ6WCQ1 1025 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 ARHGAP27Q6ZUM4 889 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CFAP44Q96MT7 982 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 BCS1LQ9Y276 419 aa14.54□□□□□ -0.08
CDK5RAP3-204ENST00000577664 BRCA1P38398 1863 aaKnown RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SCN11AQ9UI33 1791 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MRC1P22897 1456 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 CTCFP49711 727 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 TAF7Q15545 349 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 MCM10Q7L590 875 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SYTL4Q96C24 671 aaPredicted RBP14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 IFT57Q9NWB7 429 aa14.53□□□□□ -0.08
CDK5RAP3-204ENST00000577664 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 DCTN1Q14203 1278 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SLC52A2Q9HAB3 445 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 ARFGEF1Q9Y6D6 1849 aa14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 N4BP2Q86UW6 1770 aaPredicted RBP14.52□□□□□ -0.09
CDK5RAP3-204ENST00000577664 UBR3Q6ZT12 1888 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 E9PSI1 815 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 GNAI1P63096 354 aa14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SALL2Q9Y467 1007 aaPredicted RBP14.51□□□□□ -0.09
CDK5RAP3-204ENST00000577664 AMIGO3Q86WK7 504 aa14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SPINK5Q9NQ38 1064 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SIPA1L3O60292 1781 aaPredicted RBP14.5□□□□□ -0.09
CDK5RAP3-204ENST00000577664 C4BP0C0L5 1744 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 ZC3H4Q9UPT8 1303 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 TEFQ10587 303 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 DUSP27Q5VZP5 1158 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 THUMPD2Q9BTF0 503 aaKnown RBP14.49□□□□□ -0.09
CDK5RAP3-204ENST00000577664 VIRMAQ69YN4 1812 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CREBZFQ9NS37 354 aa14.48□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SBF1O95248 1867 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 A0A0G2JLW4 131 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CABP4P57796 275 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 CDCA7LQ96GN5 454 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 HEG1Q9ULI3 1381 aa14.47□□□□□ -0.09
CDK5RAP3-204ENST00000577664 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 BTBD11A6QL63 1104 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 VEGFAP15692 232 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 SSFA2P28290 1259 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 PIGBQ92521 554 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 YTHDC1Q96MU7 727 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 MBIPQ9NS73 344 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 RNF181Q9P0P0 153 aa14.46□□□□□ -0.09
CDK5RAP3-204ENST00000577664 PDE4DIPQ5VU43 2346 aa14.46□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SOS1Q07889 1333 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ZNF790Q6PG37 636 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 WBP1LQ9NX94 342 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TMOD3Q9NYL9 352 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CNTNAP1P78357 1384 aa14.45□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TNRC18O15417 2968 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ITGB4P16144 1822 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CT47B1P0C2W7 299 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 KCNA3P22001 575 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 LBX1P52954 281 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 AIDAQ96BJ3 306 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 AK7Q96M32 723 aa14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MKRN1Q9UHC7 482 aaKnown RBP14.44□□□□□ -0.1
CDK5RAP3-204ENST00000577664 DPEP1P16444 411 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 EIF4A1P60842 406 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SMIM5Q71RC9 77 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ATG3Q9NT62 314 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TSPYL4Q9UJ04 414 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 PALLDQ8WX93 1383 aa14.43□□□□□ -0.1
CDK5RAP3-204ENST00000577664 FANCIQ9NVI1 1328 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 KDM3BQ7LBC6 1761 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MMP10P09238 476 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 VSIG10Q8N0Z9 540 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ZNF428Q96B54 188 aa14.42□□□□□ -0.1
CDK5RAP3-204ENST00000577664 GLTPD2A6NH11 291 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 HOXB7P09629 217 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 SMARCC1Q92922 1105 aaPredicted RBP14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 MIS18AQ9NYP9 233 aa14.41□□□□□ -0.1
CDK5RAP3-204ENST00000577664 PHF14O94880 888 aa14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 HSPA8P11142 646 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 TSR2Q969E8 191 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 ASAP1Q9ULH1 1129 aa14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 LAS1LQ9Y4W2 734 aaKnown RBP14.4□□□□□ -0.1
CDK5RAP3-204ENST00000577664 CCDC85CA6NKD9 419 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms