RNA–Protein interactions for RNA: ENST00000576553.1

POLR2A-206, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-206ENST00000576553 KCNQ3O43525 872 aa27.46■■□□□ 1.99
POLR2A-206ENST00000576553 ZPR1O75312 459 aa27.46■■□□□ 1.99
POLR2A-206ENST00000576553 NLGN2Q8NFZ4 835 aa27.46■■□□□ 1.99
POLR2A-206ENST00000576553 PNISRQ8TF01 805 aaKnown RBP27.46■■□□□ 1.99
POLR2A-206ENST00000576553 COL15A1P39059 1388 aa27.45■■□□□ 1.98
POLR2A-206ENST00000576553 CANXP27824 592 aaKnown RBP27.44■■□□□ 1.98
POLR2A-206ENST00000576553 SRP68Q9UHB9 627 aaKnown RBP27.44■■□□□ 1.98
POLR2A-206ENST00000576553 RIPK4P57078 832 aa27.43■■□□□ 1.98
POLR2A-206ENST00000576553 LMOD3Q0VAK6 560 aa27.43■■□□□ 1.98
POLR2A-206ENST00000576553 A0A087WZG4 1122 aa27.42■■□□□ 1.98
POLR2A-206ENST00000576553 SNRPA1P09661 255 aaKnown RBP27.42■■□□□ 1.98
POLR2A-206ENST00000576553 GPR162Q16538 588 aa27.42■■□□□ 1.98
POLR2A-206ENST00000576553 RUNDC1Q96C34 613 aa27.42■■□□□ 1.98
POLR2A-206ENST00000576553 PARP3Q9Y6F1 533 aa27.42■■□□□ 1.98
POLR2A-206ENST00000576553 TMPOP42166 694 aaKnown RBP27.41■■□□□ 1.98
POLR2A-206ENST00000576553 NARFQ9UHQ1 456 aa27.41■■□□□ 1.98
POLR2A-206ENST00000576553 NPM2Q86SE8 214 aaKnown RBP27.4■■□□□ 1.98
POLR2A-206ENST00000576553 CCDC146Q8IYE0 955 aa27.4■■□□□ 1.98
POLR2A-206ENST00000576553 ADAMTS8Q9UP79 889 aa27.4■■□□□ 1.98
POLR2A-206ENST00000576553 EIF5P55010 431 aaKnown RBP27.39■■□□□ 1.98
POLR2A-206ENST00000576553 FKBP8Q14318 412 aa27.39■■□□□ 1.98
POLR2A-206ENST00000576553 USPL1Q5W0Q7 1092 aa27.39■■□□□ 1.98
POLR2A-206ENST00000576553 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.98
POLR2A-206ENST00000576553 THUMPD2Q9BTF0 503 aaKnown RBP27.39■■□□□ 1.98
POLR2A-206ENST00000576553 IL6STP40189 918 aaPredicted RBP27.38■■□□□ 1.97
POLR2A-206ENST00000576553 MIS18AQ9NYP9 233 aa27.38■■□□□ 1.97
POLR2A-206ENST00000576553 A1BGP04217 495 aa27.36■■□□□ 1.97
POLR2A-206ENST00000576553 ZNF330Q9Y3S2 320 aaPredicted RBP27.36■■□□□ 1.97
POLR2A-206ENST00000576553 USP16Q9Y5T5 823 aa27.36■■□□□ 1.97
POLR2A-206ENST00000576553 ANP32CO43423 234 aa27.34■■□□□ 1.97
POLR2A-206ENST00000576553 YY1P25490 414 aa27.34■■□□□ 1.97
POLR2A-206ENST00000576553 RRP7AQ9Y3A4 280 aaKnown RBP27.34■■□□□ 1.97
POLR2A-206ENST00000576553 KDM3BQ7LBC6 1761 aa27.33■■□□□ 1.97
POLR2A-206ENST00000576553 NEUROD2Q15784 382 aa27.33■■□□□ 1.97
POLR2A-206ENST00000576553 C10orf71Q711Q0 1435 aa27.33■■□□□ 1.96
POLR2A-206ENST00000576553 PRAMEF22A3QJZ6 481 aa27.32■■□□□ 1.96
POLR2A-206ENST00000576553 TM4SF1P30408 202 aa27.32■■□□□ 1.96
POLR2A-206ENST00000576553 BABAM1Q9NWV8 329 aa27.32■■□□□ 1.96
POLR2A-206ENST00000576553 GRIN3BO60391 1043 aa27.31■■□□□ 1.96
POLR2A-206ENST00000576553 EIF4A1P60842 406 aaKnown RBP27.31■■□□□ 1.96
POLR2A-206ENST00000576553 TGFB2P61812 414 aa27.31■■□□□ 1.96
POLR2A-206ENST00000576553 DDR1Q08345 913 aa27.31■■□□□ 1.96
POLR2A-206ENST00000576553 TSPYL4Q9UJ04 414 aa27.31■■□□□ 1.96
POLR2A-206ENST00000576553 KIF13BQ9NQT8 1826 aa27.3■■□□□ 1.96
POLR2A-206ENST00000576553 POLRMTO00411 1230 aaKnown RBP27.29■■□□□ 1.96
POLR2A-206ENST00000576553 BCL2L12Q9HB09 334 aa27.29■■□□□ 1.96
POLR2A-206ENST00000576553 TBC1D2BQ9UPU7 963 aa27.29■■□□□ 1.96
POLR2A-206ENST00000576553 GIGYF1O75420 1035 aaPredicted RBP27.28■■□□□ 1.96
POLR2A-206ENST00000576553 YBX3P16989 372 aaKnown RBP eCLIP27.28■■□□□ 1.966e-10■■■□□ 15.8
POLR2A-206ENST00000576553 NFIXQ14938 502 aa27.28■■□□□ 1.96
POLR2A-206ENST00000576553 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
POLR2A-206ENST00000576553 TRIM35Q9UPQ4 493 aa27.26■■□□□ 1.95
POLR2A-206ENST00000576553 LAMB4A4D0S4 1761 aa27.26■■□□□ 1.95
POLR2A-206ENST00000576553 PXDNLA1KZ92 1463 aa27.25■■□□□ 1.95
POLR2A-206ENST00000576553 PIP4K2AP48426 406 aaPredicted RBP27.25■■□□□ 1.95
POLR2A-206ENST00000576553 SCN7AQ01118 1682 aa27.24■■□□□ 1.95
POLR2A-206ENST00000576553 NBPF26B4DH59 902 aa27.23■■□□□ 1.95
POLR2A-206ENST00000576553 CAMTA2O94983 1202 aa27.23■■□□□ 1.95
POLR2A-206ENST00000576553 NBPF10Q6P3W6 841 aaKnown RBP27.23■■□□□ 1.95
POLR2A-206ENST00000576553 NBPF15Q8N660 670 aa27.23■■□□□ 1.95
POLR2A-206ENST00000576553 CHD4Q14839 1912 aa27.23■■□□□ 1.95
POLR2A-206ENST00000576553 A0A0G2JLW4 131 aa27.22■■□□□ 1.95
POLR2A-206ENST00000576553 SERPINB2P05120 415 aa27.22■■□□□ 1.95
POLR2A-206ENST00000576553 BICDL1Q6ZP65 573 aa27.22■■□□□ 1.95
POLR2A-206ENST00000576553 APAF1O14727 1248 aa27.21■■□□□ 1.95
POLR2A-206ENST00000576553 CCDC184Q52MB2 194 aa27.21■■□□□ 1.95
POLR2A-206ENST00000576553 TBC1D9BQ66K14 1250 aa27.21■■□□□ 1.95
POLR2A-206ENST00000576553 MRS2Q9HD23 443 aa27.21■■□□□ 1.95
POLR2A-206ENST00000576553 ZNF652Q9Y2D9 606 aa27.21■■□□□ 1.95
POLR2A-206ENST00000576553 DPEP1P16444 411 aa27.2■■□□□ 1.94
POLR2A-206ENST00000576553 CLEC4GQ6UXB4 293 aa27.2■■□□□ 1.94
POLR2A-206ENST00000576553 WWC3Q9ULE0 1092 aa27.2■■□□□ 1.94
POLR2A-206ENST00000576553 CHL1O00533 1208 aa27.19■■□□□ 1.94
POLR2A-206ENST00000576553 RGL2O15211 777 aa27.19■■□□□ 1.94
POLR2A-206ENST00000576553 LAS1LQ9Y4W2 734 aaKnown RBP27.19■■□□□ 1.94
POLR2A-206ENST00000576553 CARMIL3Q8ND23 1372 aa27.19■■□□□ 1.94
POLR2A-206ENST00000576553 KIAA1551Q9HCM1 1747 aa27.19■■□□□ 1.94
POLR2A-206ENST00000576553 ERBB4Q15303 1308 aa27.18■■□□□ 1.94
POLR2A-206ENST00000576553 N4BP2Q86UW6 1770 aaPredicted RBP27.18■■□□□ 1.94
POLR2A-206ENST00000576553 CALD1Q05682 793 aaKnown RBP27.18■■□□□ 1.94
POLR2A-206ENST00000576553 SETDB2Q96T68 719 aa27.18■■□□□ 1.94
POLR2A-206ENST00000576553 NRXN2Q9P2S2 1712 aa27.18■■□□□ 1.94
POLR2A-206ENST00000576553 BCORQ6W2J9 1755 aa27.17■■□□□ 1.94
POLR2A-206ENST00000576553 AFDNP55196 1824 aaKnown RBP27.16■■□□□ 1.94
POLR2A-206ENST00000576553 BCS1LQ9Y276 419 aa27.16■■□□□ 1.94
POLR2A-206ENST00000576553 CFAP44Q96MT7 982 aa27.15■■□□□ 1.94
POLR2A-206ENST00000576553 PIM2Q9P1W9 311 aa27.15■■□□□ 1.94
POLR2A-206ENST00000576553 NPHP1O15259 732 aa27.13■■□□□ 1.93
POLR2A-206ENST00000576553 MYL6BP14649 208 aa27.13■■□□□ 1.93
POLR2A-206ENST00000576553 EIF2S2P20042 333 aaKnown RBP27.13■■□□□ 1.93
POLR2A-206ENST00000576553 KCNA3P22001 575 aa27.13■■□□□ 1.93
POLR2A-206ENST00000576553 NGEFQ8N5V2 710 aa27.13■■□□□ 1.93
POLR2A-206ENST00000576553 KIF6Q6ZMV9 814 aa27.12■■□□□ 1.93
POLR2A-206ENST00000576553 CHRNA5P30532 468 aa27.11■■□□□ 1.93
POLR2A-206ENST00000576553 CNBD1Q8NA66 436 aa27.11■■□□□ 1.93
POLR2A-206ENST00000576553 UTRNP46939 3433 aa27.1■■□□□ 1.93
POLR2A-206ENST00000576553 ERVV-1B6SEH8 477 aa27.1■■□□□ 1.93
POLR2A-206ENST00000576553 GNAI1P63096 354 aa27.1■■□□□ 1.93
POLR2A-206ENST00000576553 DALRD3Q5D0E6 543 aaKnown RBP27.1■■□□□ 1.93
POLR2A-206ENST00000576553 PRR5LQ6MZQ0 368 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms