RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 NKX1-1Q15270 411 aaPredicted RBP10.4□□□□□ -0.74
RAB40B-210ENST00000576148 RBM42Q9BTD8 480 aaKnown RBP10.4□□□□□ -0.74
RAB40B-210ENST00000576148 ATG3Q9NT62 314 aa10.4□□□□□ -0.74
RAB40B-210ENST00000576148 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
RAB40B-210ENST00000576148 C21orf2O43822 256 aa10.39□□□□□ -0.75
RAB40B-210ENST00000576148 FXR1P51114 621 aaKnown RBP eCLIP10.39□□□□□ -0.75
RAB40B-210ENST00000576148 HDGFL2Q7Z4V5 671 aaPredicted RBP10.39□□□□□ -0.75
RAB40B-210ENST00000576148 TAOK3Q9H2K8 898 aa10.39□□□□□ -0.75
RAB40B-210ENST00000576148 THSD7BQ9C0I4 1608 aa10.39□□□□□ -0.75
RAB40B-210ENST00000576148 CASP8AP2Q9UKL3 1982 aa10.39□□□□□ -0.75
RAB40B-210ENST00000576148 USP42Q9H9J4 1324 aaKnown RBP10.38□□□□□ -0.75
RAB40B-210ENST00000576148 LTBP3Q9NS15 1303 aa10.38□□□□□ -0.75
RAB40B-210ENST00000576148 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
RAB40B-210ENST00000576148 LTBP1Q14766 1721 aa10.38□□□□□ -0.75
RAB40B-210ENST00000576148 CCDC88AQ3V6T2 1871 aa10.37□□□□□ -0.75
RAB40B-210ENST00000576148 SLC4A9Q96Q91 983 aa10.37□□□□□ -0.75
RAB40B-210ENST00000576148 SPG7Q9UQ90 795 aa10.37□□□□□ -0.75
RAB40B-210ENST00000576148 TLL2Q9Y6L7 1015 aa10.37□□□□□ -0.75
RAB40B-210ENST00000576148 ITGB4P16144 1822 aa10.36□□□□□ -0.75
RAB40B-210ENST00000576148 ZPR1O75312 459 aa10.36□□□□□ -0.75
RAB40B-210ENST00000576148 CIAPIN1Q6FI81 312 aa10.36□□□□□ -0.75
RAB40B-210ENST00000576148 ZNF622Q969S3 477 aaKnown RBP eCLIP10.36□□□□□ -0.75
RAB40B-210ENST00000576148 FBLN1P23142 703 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 CST9Q5W186 159 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 TMC1Q8TDI8 760 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 COG3Q96JB2 828 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 KDRP35968 1356 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 SCN4AP35499 1836 aa10.35□□□□□ -0.75
RAB40B-210ENST00000576148 EDC4Q6P2E9 1401 aaKnown RBP10.34□□□□□ -0.75
RAB40B-210ENST00000576148 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
RAB40B-210ENST00000576148 PDZRN3Q9UPQ7 1066 aa10.34□□□□□ -0.75
RAB40B-210ENST00000576148 MON2Q7Z3U7 1717 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 SERPINB2P05120 415 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
RAB40B-210ENST00000576148 NFIXQ14938 502 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 SOGA3Q5TF21 947 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 SAPCD2Q86UD0 394 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 TERF2IPQ9NYB0 399 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 RTL1A6NKG5 1358 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 RGPD2P0DJD1 1756 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 RNF123Q5XPI4 1314 aa10.33□□□□□ -0.76
RAB40B-210ENST00000576148 BICDL1Q6ZP65 573 aa10.32□□□□□ -0.76
RAB40B-210ENST00000576148 CTU1Q7Z7A3 348 aaKnown RBP10.32□□□□□ -0.76
RAB40B-210ENST00000576148 HHIPL1Q96JK4 782 aa10.32□□□□□ -0.76
RAB40B-210ENST00000576148 HPS5Q9UPZ3 1129 aa10.32□□□□□ -0.76
RAB40B-210ENST00000576148 DICER1Q9UPY3 1922 aaKnown RBP10.31□□□□□ -0.76
RAB40B-210ENST00000576148 TRAF5O00463 557 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 PDE6BP35913 854 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 NOGQ13253 232 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 RRS1Q15050 365 aaKnown RBP10.31□□□□□ -0.76
RAB40B-210ENST00000576148 AKAP4Q5JQC9 854 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 IFNL2Q8IZJ0 200 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 SLC12A5Q9H2X9 1139 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 ZNF541Q9H0D2 1346 aa10.31□□□□□ -0.76
RAB40B-210ENST00000576148 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
RAB40B-210ENST00000576148 SAGE1Q9NXZ1 904 aa10.3□□□□□ -0.76
RAB40B-210ENST00000576148 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
RAB40B-210ENST00000576148 CUL9Q8IWT3 2517 aa10.29□□□□□ -0.76
RAB40B-210ENST00000576148 PTCD1O75127 700 aaKnown RBP10.29□□□□□ -0.76
RAB40B-210ENST00000576148 PHKG2P15735 406 aa10.29□□□□□ -0.76
RAB40B-210ENST00000576148 LMOD1P29536 600 aaPredicted RBP10.29□□□□□ -0.76
RAB40B-210ENST00000576148 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
RAB40B-210ENST00000576148 HSP90AB2PQ58FF8 381 aa10.29□□□□□ -0.76
RAB40B-210ENST00000576148 GPC2Q8N158 579 aa10.29□□□□□ -0.76
RAB40B-210ENST00000576148 CNKSR1Q969H4 720 aa10.29□□□□□ -0.76
RAB40B-210ENST00000576148 ERVV-2B6SEH9 535 aa10.28□□□□□ -0.76
RAB40B-210ENST00000576148 CELF2O95319 508 aaKnown RBP10.28□□□□□ -0.76
RAB40B-210ENST00000576148 BRIP1Q9BX63 1249 aa10.28□□□□□ -0.76
RAB40B-210ENST00000576148 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
RAB40B-210ENST00000576148 FER1L6Q2WGJ9 1857 aa10.27□□□□□ -0.76
RAB40B-210ENST00000576148 INSRP06213 1382 aa10.27□□□□□ -0.76
RAB40B-210ENST00000576148 CARMIL3Q8ND23 1372 aa10.27□□□□□ -0.76
RAB40B-210ENST00000576148 DLEC1Q9Y238 1755 aa10.27□□□□□ -0.77
RAB40B-210ENST00000576148 PRPF40BQ6NWY9 871 aaKnown RBP10.27□□□□□ -0.77
RAB40B-210ENST00000576148 INTS5Q6P9B9 1019 aaKnown RBP10.27□□□□□ -0.77
RAB40B-210ENST00000576148 ZIC5Q96T25 663 aa10.27□□□□□ -0.77
RAB40B-210ENST00000576148 NARFQ9UHQ1 456 aa10.27□□□□□ -0.77
RAB40B-210ENST00000576148 A0A0C4DFX4 3053 aa10.27□□□□□ -0.77
RAB40B-210ENST00000576148 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
RAB40B-210ENST00000576148 TRPA1O75762 1119 aa10.26□□□□□ -0.77
RAB40B-210ENST00000576148 CCDC93Q567U6 631 aa10.26□□□□□ -0.77
RAB40B-210ENST00000576148 USP50Q70EL3 339 aaPredicted RBP10.26□□□□□ -0.77
RAB40B-210ENST00000576148 ZNF277Q9NRM2 450 aaPredicted RBP10.26□□□□□ -0.77
RAB40B-210ENST00000576148 COLQQ9Y215 455 aaPredicted RBP10.26□□□□□ -0.77
RAB40B-210ENST00000576148 A0A1W2PP64 1363 aa10.26□□□□□ -0.77
RAB40B-210ENST00000576148 FZD9O00144 591 aa10.25□□□□□ -0.77
RAB40B-210ENST00000576148 CABP4P57796 275 aa10.25□□□□□ -0.77
RAB40B-210ENST00000576148 FKBP4Q02790 459 aaKnown RBP eCLIP10.25□□□□□ -0.77
RAB40B-210ENST00000576148 STYK1Q6J9G0 422 aa10.25□□□□□ -0.77
RAB40B-210ENST00000576148 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
RAB40B-210ENST00000576148 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
RAB40B-210ENST00000576148 MYH14Q7Z406 1995 aaKnown RBP10.25□□□□□ -0.77
RAB40B-210ENST00000576148 COL5A3P25940 1745 aaPredicted RBP10.24□□□□□ -0.77
RAB40B-210ENST00000576148 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
RAB40B-210ENST00000576148 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
RAB40B-210ENST00000576148 ZNF408Q9H9D4 720 aa10.24□□□□□ -0.77
RAB40B-210ENST00000576148 BCL2L12Q9HB09 334 aa10.24□□□□□ -0.77
RAB40B-210ENST00000576148 HDAC9Q9UKV0 1011 aa10.24□□□□□ -0.77
RAB40B-210ENST00000576148 ADAMTS7Q9UKP4 1686 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 358 ms