RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 LAS1LQ9Y4W2 734 aaKnown RBP19.56■□□□□ 0.72
TRAPPC1-207ENST00000575639 PTGER2P43116 358 aa19.55■□□□□ 0.72
TRAPPC1-207ENST00000575639 EIF4A1P60842 406 aaKnown RBP19.55■□□□□ 0.72
TRAPPC1-207ENST00000575639 NCBP3Q53F19 620 aaKnown RBP19.55■□□□□ 0.72
TRAPPC1-207ENST00000575639 CHL1O00533 1208 aa19.54■□□□□ 0.72
TRAPPC1-207ENST00000575639 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
TRAPPC1-207ENST00000575639 ZBTB1Q9Y2K1 713 aa19.54■□□□□ 0.72
TRAPPC1-207ENST00000575639 ZNF831Q5JPB2 1677 aa19.54■□□□□ 0.72
TRAPPC1-207ENST00000575639 UTRNP46939 3433 aa19.54■□□□□ 0.72
TRAPPC1-207ENST00000575639 CCDC27Q2M243 656 aa19.53■□□□□ 0.72
TRAPPC1-207ENST00000575639 MSL1Q68DK7 614 aa19.53■□□□□ 0.72
TRAPPC1-207ENST00000575639 CFAP44Q96MT7 982 aa19.53■□□□□ 0.72
TRAPPC1-207ENST00000575639 USP16Q9Y5T5 823 aa19.53■□□□□ 0.72
TRAPPC1-207ENST00000575639 SOS1Q07889 1333 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 A0A087WZG4 1122 aa19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 ZPR1O75312 459 aa19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 GIGYF1O75420 1035 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 NLGN1Q8N2Q7 840 aa19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 ARXQ96QS3 562 aa19.52■□□□□ 0.72
TRAPPC1-207ENST00000575639 A1BGP04217 495 aa19.51■□□□□ 0.71
TRAPPC1-207ENST00000575639 GNAI1P63096 354 aa19.51■□□□□ 0.71
TRAPPC1-207ENST00000575639 SGIP1Q9BQI5 828 aa19.51■□□□□ 0.71
TRAPPC1-207ENST00000575639 IFT57Q9NWB7 429 aa19.51■□□□□ 0.71
TRAPPC1-207ENST00000575639 CASZ1Q86V15 1759 aa19.5■□□□□ 0.71
TRAPPC1-207ENST00000575639 PRAMEF22A3QJZ6 481 aa19.5■□□□□ 0.71
TRAPPC1-207ENST00000575639 IL6STP40189 918 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-207ENST00000575639 ZNF330Q9Y3S2 320 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC1-207ENST00000575639 EIF5P55010 431 aaKnown RBP19.49■□□□□ 0.71
TRAPPC1-207ENST00000575639 WWC1Q8IX03 1113 aa19.49■□□□□ 0.71
TRAPPC1-207ENST00000575639 TAF1LQ8IZX4 1826 aa19.48■□□□□ 0.71
TRAPPC1-207ENST00000575639 SIPA1L3O60292 1781 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC1-207ENST00000575639 COL15A1P39059 1388 aa19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 ZNF853P0CG23 659 aa19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 GYS1P13807 737 aa19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 MIER1Q8N108 512 aa19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 SALL2Q9Y467 1007 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 CICQ96RK0 1608 aaPredicted RBP19.47■□□□□ 0.71
TRAPPC1-207ENST00000575639 QSER1Q2KHR3 1735 aa19.46■□□□□ 0.71
TRAPPC1-207ENST00000575639 MBIPQ9NS73 344 aa19.46■□□□□ 0.71
TRAPPC1-207ENST00000575639 SRP68Q9UHB9 627 aaKnown RBP19.46■□□□□ 0.71
TRAPPC1-207ENST00000575639 TJP1Q07157 1748 aa19.45■□□□□ 0.7
TRAPPC1-207ENST00000575639 UBR2Q8IWV8 1755 aa19.45■□□□□ 0.7
TRAPPC1-207ENST00000575639 USPL1Q5W0Q7 1092 aa19.45■□□□□ 0.7
TRAPPC1-207ENST00000575639 DLG5Q8TDM6 1919 aa19.45■□□□□ 0.7
TRAPPC1-207ENST00000575639 MMP10P09238 476 aa19.44■□□□□ 0.7
TRAPPC1-207ENST00000575639 EIF2S2P20042 333 aaKnown RBP19.44■□□□□ 0.7
TRAPPC1-207ENST00000575639 WDR63Q8IWG1 891 aa19.44■□□□□ 0.7
TRAPPC1-207ENST00000575639 IL16Q14005 1332 aa19.44■□□□□ 0.7
TRAPPC1-207ENST00000575639 VIRMAQ69YN4 1812 aaKnown RBP19.44■□□□□ 0.7
TRAPPC1-207ENST00000575639 COL5A3P25940 1745 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 HOXB7P09629 217 aa19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 KLHL34Q8N239 644 aa19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 FHDC1Q9C0D6 1143 aaPredicted RBP19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 TBC1D2BQ9UPU7 963 aa19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 ERBB4Q15303 1308 aa19.43■□□□□ 0.7
TRAPPC1-207ENST00000575639 UBR3Q6ZT12 1888 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 NBPF26B4DH59 902 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 FKBP8Q14318 412 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 NBPF10Q6P3W6 841 aaKnown RBP19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 DZIP3Q86Y13 1208 aaKnown RBP19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 NBPF15Q8N660 670 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 PARP3Q9Y6F1 533 aa19.42■□□□□ 0.7
TRAPPC1-207ENST00000575639 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
TRAPPC1-207ENST00000575639 KRT24Q2M2I5 525 aa19.4■□□□□ 0.7
TRAPPC1-207ENST00000575639 DUSP27Q5VZP5 1158 aa19.4■□□□□ 0.7
TRAPPC1-207ENST00000575639 TUBGCP6Q96RT7 1819 aa19.39■□□□□ 0.7
TRAPPC1-207ENST00000575639 MYH14Q7Z406 1995 aaKnown RBP19.39■□□□□ 0.7
TRAPPC1-207ENST00000575639 MYL6BP14649 208 aa19.39■□□□□ 0.69
TRAPPC1-207ENST00000575639 HDGFL1Q5TGJ6 251 aa19.39■□□□□ 0.69
TRAPPC1-207ENST00000575639 ZNF652Q9Y2D9 606 aa19.39■□□□□ 0.69
TRAPPC1-207ENST00000575639 CD2APQ9Y5K6 639 aa19.39■□□□□ 0.69
TRAPPC1-207ENST00000575639 RGL2O15211 777 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 CAMTA2O94983 1202 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 TM4SF1P30408 202 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 CLEC4GQ6UXB4 293 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 KIF6Q6ZMV9 814 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 TSR2Q969E8 191 aaKnown RBP19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 MYH16Q9H6N6 1097 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 BCL2L12Q9HB09 334 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 CEP350Q5VT06 3117 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 KDM3BQ7LBC6 1761 aa19.37■□□□□ 0.69
TRAPPC1-207ENST00000575639 NFIXQ14938 502 aa19.36■□□□□ 0.69
TRAPPC1-207ENST00000575639 ELL2O00472 640 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 GOLGA2Q08379 1002 aa19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 PDIA6Q15084 440 aa19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 BICDL1Q6ZP65 573 aa19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 SETDB2Q96T68 719 aa19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 DBF4Q9UBU7 674 aaPredicted RBP19.35■□□□□ 0.69
TRAPPC1-207ENST00000575639 ERVV-1B6SEH8 477 aa19.34■□□□□ 0.69
TRAPPC1-207ENST00000575639 POLRMTO00411 1230 aaKnown RBP19.34■□□□□ 0.69
TRAPPC1-207ENST00000575639 C8orf58Q8NAV2 365 aa19.34■□□□□ 0.69
TRAPPC1-207ENST00000575639 DDR1Q08345 913 aa19.33■□□□□ 0.68
TRAPPC1-207ENST00000575639 TBC1D9BQ66K14 1250 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms