RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	MIS18A	Q9NYP9	233 aa		18.84	■□□□□ 0.61
EDC4-210	ENST00000575507	USP16	Q9Y5T5	823 aa		18.84	■□□□□ 0.61
EDC4-210	ENST00000575507	SIPA1L3	O60292	1781 aa	Predicted RBP	18.83	■□□□□ 0.61
EDC4-210	ENST00000575507	A1BG	P04217	495 aa		18.83	■□□□□ 0.6
EDC4-210	ENST00000575507	FMNL2	Q96PY5	1086 aa		18.83	■□□□□ 0.6
EDC4-210	ENST00000575507	C4A	P0C0L4	1744 aa		18.83	■□□□□ 0.6
EDC4-210	ENST00000575507	EIF5	P55010	431 aa	Known RBP	18.82	■□□□□ 0.6
EDC4-210	ENST00000575507	THUMPD2	Q9BTF0	503 aa	Known RBP	18.82	■□□□□ 0.6
EDC4-210	ENST00000575507	NARF	Q9UHQ1	456 aa		18.82	■□□□□ 0.6
EDC4-210	ENST00000575507	COL15A1	P39059	1388 aa		18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	MYBBP1A	Q9BQG0	1328 aa	Known RBP	18.81	■□□□□ 0.6
EDC4-210	ENST00000575507		A0A0G2JLW4	131 aa		18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	STARD3NL	O95772	234 aa		18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	TAF7	Q15545	349 aa	Predicted RBP	18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	NFE2L2	Q16236	605 aa		18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	PARP3	Q9Y6F1	533 aa		18.81	■□□□□ 0.6
EDC4-210	ENST00000575507	POLRMT	O00411	1230 aa	Known RBP	18.8	■□□□□ 0.6
EDC4-210	ENST00000575507	ZPR1	O75312	459 aa		18.8	■□□□□ 0.6
EDC4-210	ENST00000575507	PIP4K2A	P48426	406 aa	Predicted RBP	18.8	■□□□□ 0.6
EDC4-210	ENST00000575507	TEX13A	Q9BXU3	409 aa	Predicted RBP	18.8	■□□□□ 0.6
EDC4-210	ENST00000575507	NFIX	Q14938	502 aa		18.79	■□□□□ 0.6
EDC4-210	ENST00000575507	ZNF784	Q8NCA9	323 aa	Predicted RBP	18.79	■□□□□ 0.6
EDC4-210	ENST00000575507	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.79	■□□□□ 0.6
EDC4-210	ENST00000575507	PXDNL	A1KZ92	1463 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	C10orf71	Q711Q0	1435 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	GRIN3B	O60391	1043 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	DPEP1	P16444	411 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	KCNA3	P22001	575 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	TGFB2	P61812	414 aa		18.78	■□□□□ 0.6
EDC4-210	ENST00000575507	TBC1D2B	Q9UPU7	963 aa		18.77	■□□□□ 0.6
EDC4-210	ENST00000575507	NEFM	P07197	916 aa		18.76	■□□□□ 0.59
EDC4-210	ENST00000575507	SNRPA1	P09661	255 aa	Known RBP	18.76	■□□□□ 0.59
EDC4-210	ENST00000575507	ZNF330	Q9Y3S2	320 aa	Predicted RBP	18.76	■□□□□ 0.59
EDC4-210	ENST00000575507	IL6ST	P40189	918 aa	Predicted RBP	18.75	■□□□□ 0.59
EDC4-210	ENST00000575507	CCDC146	Q8IYE0	955 aa		18.75	■□□□□ 0.59
EDC4-210	ENST00000575507	PNN	Q9H307	717 aa	Known RBP	18.75	■□□□□ 0.59
EDC4-210	ENST00000575507	MAPK8IP3	Q9UPT6	1336 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	KIAA1551	Q9HCM1	1747 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	ZNF316	A6NFI3	1004 aa	Predicted RBP	18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	NBPF26	B4DH59	902 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	TMPO	P42166	694 aa	Known RBP	18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	RIPK4	P57078	832 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	NBPF10	Q6P3W6	841 aa	Known RBP	18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	NBPF15	Q8N660	670 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	ADAMTS8	Q9UP79	889 aa		18.74	■□□□□ 0.59
EDC4-210	ENST00000575507	SERPINB2	P05120	415 aa		18.73	■□□□□ 0.59
EDC4-210	ENST00000575507	EIF4A1	P60842	406 aa	Known RBP	18.73	■□□□□ 0.59
EDC4-210	ENST00000575507	TBC1D9B	Q66K14	1250 aa		18.73	■□□□□ 0.59
EDC4-210	ENST00000575507	BICDL1	Q6ZP65	573 aa		18.73	■□□□□ 0.59
EDC4-210	ENST00000575507	RRP7A	Q9Y3A4	280 aa	Known RBP	18.73	■□□□□ 0.59
EDC4-210	ENST00000575507		A0A087WZG4	1122 aa		18.72	■□□□□ 0.59
EDC4-210	ENST00000575507	CAMTA2	O94983	1202 aa		18.72	■□□□□ 0.59
EDC4-210	ENST00000575507	CHRNA5	P30532	468 aa		18.72	■□□□□ 0.59
EDC4-210	ENST00000575507	KIF13B	Q9NQT8	1826 aa		18.72	■□□□□ 0.59
EDC4-210	ENST00000575507	UTRN	P46939	3433 aa		18.71	■□□□□ 0.59
EDC4-210	ENST00000575507	BCS1L	Q9Y276	419 aa		18.71	■□□□□ 0.59
EDC4-210	ENST00000575507	GIGYF1	O75420	1035 aa	Predicted RBP	18.7	■□□□□ 0.58
EDC4-210	ENST00000575507	CCDC184	Q52MB2	194 aa		18.7	■□□□□ 0.58
EDC4-210	ENST00000575507	PNISR	Q8TF01	805 aa	Known RBP	18.7	■□□□□ 0.58
EDC4-210	ENST00000575507	DLG5	Q8TDM6	1919 aa		18.7	■□□□□ 0.58
EDC4-210	ENST00000575507	N4BP2	Q86UW6	1770 aa	Predicted RBP	18.7	■□□□□ 0.58
EDC4-210	ENST00000575507	NEUROD2	Q15784	382 aa		18.69	■□□□□ 0.58
EDC4-210	ENST00000575507	DZIP3	Q86Y13	1208 aa	Known RBP	18.69	■□□□□ 0.58
EDC4-210	ENST00000575507	CCDC24	Q8N4L8	307 aa		18.68	■□□□□ 0.58
EDC4-210	ENST00000575507	RUNDC1	Q96C34	613 aa		18.68	■□□□□ 0.58
EDC4-210	ENST00000575507	TRIM35	Q9UPQ4	493 aa		18.68	■□□□□ 0.58
EDC4-210	ENST00000575507	CARMIL3	Q8ND23	1372 aa		18.68	■□□□□ 0.58
EDC4-210	ENST00000575507	WDR43	Q15061	677 aa	Known RBP eCLIP	18.67	■□□□□ 0.58
EDC4-210	ENST00000575507	PIM2	Q9P1W9	311 aa		18.67	■□□□□ 0.58
EDC4-210	ENST00000575507	GOLGB1	Q14789	3259 aa	Known RBP	18.66	■□□□□ 0.58
EDC4-210	ENST00000575507	CHD4	Q14839	1912 aa		18.65	■□□□□ 0.58
EDC4-210	ENST00000575507	NRXN2	Q9P2S2	1712 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	HLF	Q16534	295 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	PRR5L	Q6MZQ0	368 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	ARHGAP27	Q6ZUM4	889 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	NGEF	Q8N5V2	710 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	TSPYL4	Q9UJ04	414 aa		18.64	■□□□□ 0.57
EDC4-210	ENST00000575507	KDM3B	Q7LBC6	1761 aa		18.63	■□□□□ 0.57
EDC4-210	ENST00000575507	NPM2	Q86SE8	214 aa	Known RBP	18.63	■□□□□ 0.57
EDC4-210	ENST00000575507	CHL1	O00533	1208 aa		18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	KRT24	Q2M2I5	525 aa		18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	DALRD3	Q5D0E6	543 aa	Known RBP	18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	CLEC4G	Q6UXB4	293 aa		18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	SETDB2	Q96T68	719 aa		18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	ADCY9	O60503	1353 aa		18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	AFDN	P55196	1824 aa	Known RBP	18.62	■□□□□ 0.57
EDC4-210	ENST00000575507	SCN7A	Q01118	1682 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	ATP10D	Q9P241	1426 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	MYL6B	P14649	208 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	PDIA6	Q15084	440 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	TTLL7	Q6ZT98	887 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	C2CD5	Q86YS7	1000 aa		18.61	■□□□□ 0.57
EDC4-210	ENST00000575507	APAF1	O14727	1248 aa		18.6	■□□□□ 0.57
EDC4-210	ENST00000575507	LMOD3	Q0VAK6	560 aa		18.6	■□□□□ 0.57
EDC4-210	ENST00000575507	LRP10	Q7Z4F1	713 aa		18.6	■□□□□ 0.57
EDC4-210	ENST00000575507	BABAM1	Q9NWV8	329 aa		18.6	■□□□□ 0.57
EDC4-210	ENST00000575507	BRIP1	Q9BX63	1249 aa		18.59	■□□□□ 0.57
EDC4-210	ENST00000575507	BRCA1	P38398	1863 aa	Known RBP	18.58	■□□□□ 0.57
EDC4-210	ENST00000575507	ANXA1	P04083	346 aa		18.58	■□□□□ 0.56
EDC4-210	ENST00000575507	EIF2S2	P20042	333 aa	Known RBP	18.58	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms