RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-231ENST00000574875 PARP3Q9Y6F1 533 aa25.8■■□□□ 1.72
ABR-231ENST00000574875 CANXP27824 592 aaKnown RBP25.79■■□□□ 1.72
ABR-231ENST00000574875 MYBBP1AQ9BQG0 1328 aaKnown RBP25.79■■□□□ 1.72
ABR-231ENST00000574875 C4AP0C0L4 1744 aa25.78■■□□□ 1.72
ABR-231ENST00000574875 GRIN3BO60391 1043 aa25.78■■□□□ 1.72
ABR-231ENST00000574875 YBX3P16989 372 aaKnown RBP eCLIP25.78■■□□□ 1.72
ABR-231ENST00000574875 FKBP8Q14318 412 aa25.78■■□□□ 1.72
ABR-231ENST00000574875 TAF7Q15545 349 aaPredicted RBP25.77■■□□□ 1.72
ABR-231ENST00000574875 CHD4Q14839 1912 aa25.76■■□□□ 1.72
ABR-231ENST00000574875 NFE2L2Q16236 605 aa25.76■■□□□ 1.71
ABR-231ENST00000574875 USPL1Q5W0Q7 1092 aa25.76■■□□□ 1.71
ABR-231ENST00000574875 NARFQ9UHQ1 456 aa25.76■■□□□ 1.71
ABR-231ENST00000574875 MAPK8IP3Q9UPT6 1336 aa25.75■■□□□ 1.71
ABR-231ENST00000574875 COL15A1P39059 1388 aa25.74■■□□□ 1.71
ABR-231ENST00000574875 TM4SF1P30408 202 aa25.73■■□□□ 1.71
ABR-231ENST00000574875 EIF5P55010 431 aaKnown RBP25.73■■□□□ 1.71
ABR-231ENST00000574875 TGFB2P61812 414 aa25.73■■□□□ 1.71
ABR-231ENST00000574875 A0A087WZG4 1122 aa25.72■■□□□ 1.71
ABR-231ENST00000574875 DLG5Q8TDM6 1919 aa25.72■■□□□ 1.71
ABR-231ENST00000574875 A1BGP04217 495 aa25.71■■□□□ 1.71
ABR-231ENST00000574875 SNRPA1P09661 255 aaKnown RBP25.71■■□□□ 1.71
ABR-231ENST00000574875 PRKRIP1Q9H875 184 aaPredicted RBP25.71■■□□□ 1.71
ABR-231ENST00000574875 MIS18AQ9NYP9 233 aa25.71■■□□□ 1.71
ABR-231ENST00000574875 USP16Q9Y5T5 823 aa25.71■■□□□ 1.71
ABR-231ENST00000574875 UTRNP46939 3433 aa25.71■■□□□ 1.71
ABR-231ENST00000574875 DDR1Q08345 913 aa25.7■■□□□ 1.7
ABR-231ENST00000574875 WWC3Q9ULE0 1092 aa25.7■■□□□ 1.7
ABR-231ENST00000574875 IL6STP40189 918 aaPredicted RBP25.69■■□□□ 1.7
ABR-231ENST00000574875 A0A0G2JLW4 131 aa25.68■■□□□ 1.7
ABR-231ENST00000574875 NPM2Q86SE8 214 aaKnown RBP25.68■■□□□ 1.7
ABR-231ENST00000574875 PNISRQ8TF01 805 aaKnown RBP25.68■■□□□ 1.7
ABR-231ENST00000574875 BCL2L12Q9HB09 334 aa25.68■■□□□ 1.7
ABR-231ENST00000574875 ZNF330Q9Y3S2 320 aaPredicted RBP25.68■■□□□ 1.7
ABR-231ENST00000574875 KIF13BQ9NQT8 1826 aa25.67■■□□□ 1.7
ABR-231ENST00000574875 PRAMEF22A3QJZ6 481 aa25.67■■□□□ 1.7
ABR-231ENST00000574875 POLRMTO00411 1230 aaKnown RBP25.67■■□□□ 1.7
ABR-231ENST00000574875 C10orf71Q711Q0 1435 aa25.66■■□□□ 1.7
ABR-231ENST00000574875 RIPK4P57078 832 aa25.66■■□□□ 1.7
ABR-231ENST00000574875 NFIXQ14938 502 aa25.66■■□□□ 1.7
ABR-231ENST00000574875 THUMPD2Q9BTF0 503 aaKnown RBP25.66■■□□□ 1.7
ABR-231ENST00000574875 TBC1D2BQ9UPU7 963 aa25.66■■□□□ 1.7
ABR-231ENST00000574875 DPEP1P16444 411 aa25.65■■□□□ 1.7
ABR-231ENST00000574875 WDR43Q15061 677 aaKnown RBP eCLIP25.65■■□□□ 1.7
ABR-231ENST00000574875 GOLGB1Q14789 3259 aaKnown RBP25.64■■□□□ 1.7
ABR-231ENST00000574875 ZNF784Q8NCA9 323 aaPredicted RBP25.64■■□□□ 1.7
ABR-231ENST00000574875 PXDNLA1KZ92 1463 aa25.64■■□□□ 1.69
ABR-231ENST00000574875 TMPOP42166 694 aaKnown RBP25.63■■□□□ 1.69
ABR-231ENST00000574875 N4BP2Q86UW6 1770 aaPredicted RBP25.63■■□□□ 1.69
ABR-231ENST00000574875 CCDC146Q8IYE0 955 aa25.62■■□□□ 1.69
ABR-231ENST00000574875 ADAMTS8Q9UP79 889 aa25.62■■□□□ 1.69
ABR-231ENST00000574875 SERPINB2P05120 415 aa25.61■■□□□ 1.69
ABR-231ENST00000574875 PIP4K2AP48426 406 aaPredicted RBP25.61■■□□□ 1.69
ABR-231ENST00000574875 BICDL1Q6ZP65 573 aa25.61■■□□□ 1.69
ABR-231ENST00000574875 KCNA3P22001 575 aa25.6■■□□□ 1.69
ABR-231ENST00000574875 RUNDC1Q96C34 613 aa25.6■■□□□ 1.69
ABR-231ENST00000574875 BCS1LQ9Y276 419 aa25.6■■□□□ 1.69
ABR-231ENST00000574875 KIAA1551Q9HCM1 1747 aa25.6■■□□□ 1.69
ABR-231ENST00000574875 EIF4A1P60842 406 aaKnown RBP25.59■■□□□ 1.69
ABR-231ENST00000574875 LMOD3Q0VAK6 560 aa25.59■■□□□ 1.69
ABR-231ENST00000574875 GIGYF1O75420 1035 aaPredicted RBP25.58■■□□□ 1.69
ABR-231ENST00000574875 NEUROD2Q15784 382 aa25.58■■□□□ 1.69
ABR-231ENST00000574875 TBC1D9BQ66K14 1250 aa25.58■■□□□ 1.69
ABR-231ENST00000574875 DZIP3Q86Y13 1208 aaKnown RBP25.58■■□□□ 1.69
ABR-231ENST00000574875 PIM2Q9P1W9 311 aa25.58■■□□□ 1.69
ABR-231ENST00000574875 RRP7AQ9Y3A4 280 aaKnown RBP25.58■■□□□ 1.69
ABR-231ENST00000574875 NBPF26B4DH59 902 aa25.57■■□□□ 1.68
ABR-231ENST00000574875 CAMTA2O94983 1202 aa25.57■■□□□ 1.68
ABR-231ENST00000574875 NBPF10Q6P3W6 841 aaKnown RBP25.57■■□□□ 1.68
ABR-231ENST00000574875 NBPF15Q8N660 670 aa25.57■■□□□ 1.68
ABR-231ENST00000574875 AFDNP55196 1824 aaKnown RBP25.56■■□□□ 1.68
ABR-231ENST00000574875 KDM3BQ7LBC6 1761 aa25.55■■□□□ 1.68
ABR-231ENST00000574875 CHRNA5P30532 468 aa25.55■■□□□ 1.68
ABR-231ENST00000574875 TSPYL4Q9UJ04 414 aa25.55■■□□□ 1.68
ABR-231ENST00000574875 SETDB2Q96T68 719 aa25.54■■□□□ 1.68
ABR-231ENST00000574875 BABAM1Q9NWV8 329 aa25.54■■□□□ 1.68
ABR-231ENST00000574875 DALRD3Q5D0E6 543 aaKnown RBP25.53■■□□□ 1.68
ABR-231ENST00000574875 CLEC4GQ6UXB4 293 aa25.52■■□□□ 1.68
ABR-231ENST00000574875 ARHGAP27Q6ZUM4 889 aa25.52■■□□□ 1.68
ABR-231ENST00000574875 NRXN2Q9P2S2 1712 aa25.51■■□□□ 1.68
ABR-231ENST00000574875 BRCA1P38398 1863 aaKnown RBP25.5■■□□□ 1.67
ABR-231ENST00000574875 TRIM35Q9UPQ4 493 aa25.5■■□□□ 1.67
ABR-231ENST00000574875 ZNF652Q9Y2D9 606 aa25.5■■□□□ 1.67
ABR-231ENST00000574875 SCN7AQ01118 1682 aa25.49■■□□□ 1.67
ABR-231ENST00000574875 CARMIL3Q8ND23 1372 aa25.49■■□□□ 1.67
ABR-231ENST00000574875 H0YIN7 160 aa25.48■■□□□ 1.67
ABR-231ENST00000574875 NGEFQ8N5V2 710 aa25.48■■□□□ 1.67
ABR-231ENST00000574875 PRR5LQ6MZQ0 368 aa25.47■■□□□ 1.67
ABR-231ENST00000574875 C2CD5Q86YS7 1000 aa25.47■■□□□ 1.67
ABR-231ENST00000574875 BRIP1Q9BX63 1249 aa25.47■■□□□ 1.67
ABR-231ENST00000574875 LAMB4A4D0S4 1761 aa25.46■■□□□ 1.67
ABR-231ENST00000574875 RGL2O15211 777 aa25.46■■□□□ 1.67
ABR-231ENST00000574875 NPHP1O15259 732 aa25.46■■□□□ 1.67
ABR-231ENST00000574875 CCDC24Q8N4L8 307 aa25.46■■□□□ 1.67
ABR-231ENST00000574875 LAS1LQ9Y4W2 734 aaKnown RBP25.46■■□□□ 1.67
ABR-231ENST00000574875 CHL1O00533 1208 aa25.45■■□□□ 1.66
ABR-231ENST00000574875 MYL6BP14649 208 aa25.45■■□□□ 1.66
ABR-231ENST00000574875 PDE6BP35913 854 aa25.45■■□□□ 1.66
ABR-231ENST00000574875 BCORQ6W2J9 1755 aa25.44■■□□□ 1.66
ABR-231ENST00000574875 APAF1O14727 1248 aa25.44■■□□□ 1.66
ABR-231ENST00000574875 EIF2S2P20042 333 aaKnown RBP25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms