RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 ENOX2Q16206 610 aaKnown RBP3.06□□□□□ -1.92
CHD3-217ENST00000574022 TBCELQ5QJ74 424 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 SOGA3Q5TF21 947 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 VASH1Q7L8A9 365 aaPredicted RBP3.06□□□□□ -1.92
CHD3-217ENST00000574022 VPS37DQ86XT2 251 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 STAG2Q8N3U4 1231 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 ABTB2Q8N961 1025 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 SLC4A9Q96Q91 983 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 SETDB2Q96T68 719 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 GMLQ99445 158 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 C2orf49Q9BVC5 232 aaPredicted RBP3.06□□□□□ -1.92
CHD3-217ENST00000574022 CHMP4AQ9BY43 222 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 OSBPL3Q9H4L5 887 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 SCHIP1Q9P0W5 487 aaPredicted RBP3.06□□□□□ -1.92
CHD3-217ENST00000574022 POLIQ9UNA4 740 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 INPP5FQ9Y2H2 1132 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 CHMP3Q9Y3E7 222 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 EMILIN1Q9Y6C2 1016 aa3.06□□□□□ -1.92
CHD3-217ENST00000574022 ZBTB24O43167 697 aaPredicted RBP3.05□□□□□ -1.92
CHD3-217ENST00000574022 MZF1P28698 734 aaPredicted RBP3.05□□□□□ -1.92
CHD3-217ENST00000574022 LSM11P83369 360 aaKnown RBP eCLIP3.05□□□□□ -1.92
CHD3-217ENST00000574022 FOXK2Q01167 660 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 DNM1Q05193 864 aaKnown RBP3.05□□□□□ -1.92
CHD3-217ENST00000574022 RBL2Q08999 1139 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 ESCO1Q5FWF5 840 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 INTS6LQ5JSJ4 861 aaKnown RBP3.05□□□□□ -1.92
CHD3-217ENST00000574022 ZNF662Q6ZS27 426 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 ATCAYQ86WG3 371 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 SLC9A9Q8IVB4 645 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 ZNF654Q8IZM8 581 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 GJD3Q8N144 294 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 PMFBP1Q8TBY8 1022 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 MARVELD3Q96A59 401 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 FRMD6Q96NE9 622 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 ZSWIM4Q9H7M6 989 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 ETNK1Q9HBU6 452 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 CYLDQ9NQC7 956 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 DDX41Q9UJV9 622 aaKnown RBP3.05□□□□□ -1.92
CHD3-217ENST00000574022 LRFN2Q9ULH4 789 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 AK5Q9Y6K8 562 aa3.05□□□□□ -1.92
CHD3-217ENST00000574022 SBNO2Q9Y2G9 1366 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 A6NJY4 79 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 GNRH1P01148 92 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 NEFLP07196 543 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 PCSK2P16519 638 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 VARSP26640 1264 aaKnown RBP3.04□□□□□ -1.92
CHD3-217ENST00000574022 SMTNP53814 917 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 PSMA6P60900 246 aaKnown RBP3.04□□□□□ -1.92
CHD3-217ENST00000574022 DHX9Q08211 1270 aaKnown RBP3.04□□□□□ -1.92
CHD3-217ENST00000574022 C11orf91Q3C1V1 193 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 ZNF394Q53GI3 561 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 PPP1R18Q6NYC8 613 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 ANKRD13DQ6ZTN6 518 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 USP48Q86UV5 1035 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 TTC16Q8NEE8 873 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 FBF1Q8TES7 1133 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 EDEM1Q92611 657 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 MYO19Q96H55 970 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 CRELD1Q96HD1 420 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 NGLY1Q96IV0 654 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 CSRNP1Q96S65 589 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 MTRQ99707 1265 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 QTRT2Q9H974 415 aaKnown RBP3.04□□□□□ -1.92
CHD3-217ENST00000574022 TMPRSS4Q9NRS4 437 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 SPG7Q9UQ90 795 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 FCF1Q9Y324 198 aaKnown RBP3.04□□□□□ -1.92
CHD3-217ENST00000574022 MAP4K5Q9Y4K4 846 aa3.04□□□□□ -1.92
CHD3-217ENST00000574022 SERTM1A2A2V5 107 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 CDK2AP1O14519 115 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 ST18O60284 1047 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 STK10O94804 968 aaKnown RBP3.03□□□□□ -1.92
CHD3-217ENST00000574022 S1PR4O95977 384 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 PDGFAP04085 211 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 CTSHP09668 335 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 EIF4BP23588 611 aaKnown RBP3.03□□□□□ -1.92
CHD3-217ENST00000574022 ZAP70P43403 619 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 RACK1P63244 317 aaKnown RBP3.03□□□□□ -1.92
CHD3-217ENST00000574022 MYT1Q01538 1121 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 ARID5BQ14865 1188 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 MTFR1Q15390 333 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 FAM26DQ5JW98 314 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 SDE2Q6IQ49 451 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 NYAP1Q6ZVC0 841 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 HS2ST1Q7LGA3 356 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 CYP2U1Q7Z449 544 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 ZNF516Q92618 1163 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 IFT43Q96FT9 208 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 PIF1Q9H611 641 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 IL21Q9HBE4 155 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 CWC22Q9HCG8 908 aaKnown RBP3.03□□□□□ -1.92
CHD3-217ENST00000574022 SRA1Q9HD15 236 aaKnown RBP3.03□□□□□ -1.92
CHD3-217ENST00000574022 GGT7Q9UJ14 662 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.03□□□□□ -1.92
CHD3-217ENST00000574022 PCDHGB7Q9Y5F8 929 aa3.03□□□□□ -1.92
CHD3-217ENST00000574022 EIF1AYO14602 144 aaKnown RBP3.02□□□□□ -1.93
CHD3-217ENST00000574022 CLSTN1O94985 981 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 RPLP1P05386 114 aaKnown RBP3.02□□□□□ -1.93
CHD3-217ENST00000574022 DGKZQ13574 1117 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 TEAD4Q15561 434 aa3.02□□□□□ -1.93
CHD3-217ENST00000574022 C8orf34Q49A92 452 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms