RNA–Protein interactions for RNA: ENST00000573842.1

HCFC1R1-205, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-205ENST00000573842 SCN7AQ01118 1682 aa28.32■■■□□ 2.12
HCFC1R1-205ENST00000573842 MCM10Q7L590 875 aa28.31■■■□□ 2.12
HCFC1R1-205ENST00000573842 PNNQ9H307 717 aaKnown RBP28.31■■■□□ 2.12
HCFC1R1-205ENST00000573842 PARP3Q9Y6F1 533 aa28.31■■■□□ 2.12
HCFC1R1-205ENST00000573842 MYBBP1AQ9BQG0 1328 aaKnown RBP28.31■■■□□ 2.12
HCFC1R1-205ENST00000573842 MAPK8IP3Q9UPT6 1336 aa28.3■■■□□ 2.12
HCFC1R1-205ENST00000573842 GRIN3BO60391 1043 aa28.3■■■□□ 2.12
HCFC1R1-205ENST00000573842 ZPR1O75312 459 aa28.3■■■□□ 2.12
HCFC1R1-205ENST00000573842 YBX3P16989 372 aaKnown RBP eCLIP28.3■■■□□ 2.12
HCFC1R1-205ENST00000573842 TEX13AQ9BXU3 409 aaPredicted RBP28.3■■■□□ 2.12
HCFC1R1-205ENST00000573842 LAMB4A4D0S4 1761 aa28.29■■■□□ 2.12
HCFC1R1-205ENST00000573842 KDM3BQ7LBC6 1761 aa28.29■■■□□ 2.12
HCFC1R1-205ENST00000573842 BRCA1P38398 1863 aaKnown RBP28.29■■■□□ 2.12
HCFC1R1-205ENST00000573842 ZEB1P37275 1124 aaPredicted RBP28.28■■■□□ 2.12
HCFC1R1-205ENST00000573842 PXDNLA1KZ92 1463 aa28.27■■■□□ 2.12
HCFC1R1-205ENST00000573842 AFDNP55196 1824 aaKnown RBP28.27■■■□□ 2.12
HCFC1R1-205ENST00000573842 FKBP8Q14318 412 aa28.27■■■□□ 2.12
HCFC1R1-205ENST00000573842 CANXP27824 592 aaKnown RBP28.26■■■□□ 2.11
HCFC1R1-205ENST00000573842 PLEKHF1Q96S99 279 aa28.26■■■□□ 2.11
HCFC1R1-205ENST00000573842 DCTN1Q14203 1278 aa28.25■■■□□ 2.11
HCFC1R1-205ENST00000573842 USPL1Q5W0Q7 1092 aa28.25■■■□□ 2.11
HCFC1R1-205ENST00000573842 NARFQ9UHQ1 456 aa28.25■■■□□ 2.11
HCFC1R1-205ENST00000573842 BCORQ6W2J9 1755 aa28.24■■■□□ 2.11
HCFC1R1-205ENST00000573842 NFE2L2Q16236 605 aa28.23■■■□□ 2.11
HCFC1R1-205ENST00000573842 NRXN2Q9P2S2 1712 aa28.23■■■□□ 2.11
HCFC1R1-205ENST00000573842 A0A087WZG4 1122 aa28.22■■■□□ 2.11
HCFC1R1-205ENST00000573842 KCNQ3O43525 872 aa28.22■■■□□ 2.11
HCFC1R1-205ENST00000573842 TGFB2P61812 414 aa28.21■■■□□ 2.11
HCFC1R1-205ENST00000573842 EIF5P55010 431 aaKnown RBP28.2■■■□□ 2.1
HCFC1R1-205ENST00000573842 DDR1Q08345 913 aa28.2■■■□□ 2.1
HCFC1R1-205ENST00000573842 WWC3Q9ULE0 1092 aa28.2■■■□□ 2.1
HCFC1R1-205ENST00000573842 ARFGEF1Q9Y6D6 1849 aa28.2■■■□□ 2.1
HCFC1R1-205ENST00000573842 NPM2Q86SE8 214 aaKnown RBP28.19■■■□□ 2.1
HCFC1R1-205ENST00000573842 ZNF330Q9Y3S2 320 aaPredicted RBP28.19■■■□□ 2.1
HCFC1R1-205ENST00000573842 IL6STP40189 918 aaPredicted RBP28.18■■■□□ 2.1
HCFC1R1-205ENST00000573842 TAF7Q15545 349 aaPredicted RBP28.18■■■□□ 2.1
HCFC1R1-205ENST00000573842 ZNF784Q8NCA9 323 aaPredicted RBP28.18■■■□□ 2.1
HCFC1R1-205ENST00000573842 POLRMTO00411 1230 aaKnown RBP28.17■■■□□ 2.1
HCFC1R1-205ENST00000573842 SNRPA1P09661 255 aaKnown RBP28.17■■■□□ 2.1
HCFC1R1-205ENST00000573842 DLEC1Q9Y238 1755 aa28.16■■■□□ 2.1
HCFC1R1-205ENST00000573842 TM4SF1P30408 202 aa28.16■■■□□ 2.1
HCFC1R1-205ENST00000573842 PNISRQ8TF01 805 aaKnown RBP28.16■■■□□ 2.1
HCFC1R1-205ENST00000573842 A1BGP04217 495 aa28.14■■■□□ 2.1
HCFC1R1-205ENST00000573842 NFIXQ14938 502 aa28.14■■■□□ 2.1
HCFC1R1-205ENST00000573842 WDR43Q15061 677 aaKnown RBP eCLIP28.14■■■□□ 2.1
HCFC1R1-205ENST00000573842 PRKRIP1Q9H875 184 aaPredicted RBP28.14■■■□□ 2.1
HCFC1R1-205ENST00000573842 BCL2L12Q9HB09 334 aa28.14■■■□□ 2.1
HCFC1R1-205ENST00000573842 A0A0G2JLW4 131 aa28.13■■■□□ 2.09
HCFC1R1-205ENST00000573842 DPEP1P16444 411 aa28.12■■■□□ 2.09
HCFC1R1-205ENST00000573842 USP16Q9Y5T5 823 aa28.12■■■□□ 2.09
HCFC1R1-205ENST00000573842 PRAMEF22A3QJZ6 481 aa28.11■■■□□ 2.09
HCFC1R1-205ENST00000573842 MIS18AQ9NYP9 233 aa28.11■■■□□ 2.09
HCFC1R1-205ENST00000573842 LMOD3Q0VAK6 560 aa28.1■■■□□ 2.09
HCFC1R1-205ENST00000573842 THUMPD2Q9BTF0 503 aaKnown RBP28.1■■■□□ 2.09
HCFC1R1-205ENST00000573842 TBC1D2BQ9UPU7 963 aa28.1■■■□□ 2.09
HCFC1R1-205ENST00000573842 BCS1LQ9Y276 419 aa28.1■■■□□ 2.09
HCFC1R1-205ENST00000573842 RIPK4P57078 832 aa28.08■■■□□ 2.09
HCFC1R1-205ENST00000573842 ANKRD31Q8N7Z5 1873 aa28.08■■■□□ 2.09
HCFC1R1-205ENST00000573842 SERPINB2P05120 415 aa28.07■■■□□ 2.08
HCFC1R1-205ENST00000573842 BICDL1Q6ZP65 573 aa28.07■■■□□ 2.08
HCFC1R1-205ENST00000573842 DZIP3Q86Y13 1208 aaKnown RBP28.07■■■□□ 2.08
HCFC1R1-205ENST00000573842 CARMIL3Q8ND23 1372 aa28.07■■■□□ 2.08
HCFC1R1-205ENST00000573842 TMPOP42166 694 aaKnown RBP28.06■■■□□ 2.08
HCFC1R1-205ENST00000573842 PIP4K2AP48426 406 aaPredicted RBP28.06■■■□□ 2.08
HCFC1R1-205ENST00000573842 CCDC146Q8IYE0 955 aa28.06■■■□□ 2.08
HCFC1R1-205ENST00000573842 PIM2Q9P1W9 311 aa28.06■■■□□ 2.08
HCFC1R1-205ENST00000573842 TBC1D9BQ66K14 1250 aa28.05■■■□□ 2.08
HCFC1R1-205ENST00000573842 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
HCFC1R1-205ENST00000573842 ADCY9O60503 1353 aa28.03■■■□□ 2.08
HCFC1R1-205ENST00000573842 RUNDC1Q96C34 613 aa28.03■■■□□ 2.08
HCFC1R1-205ENST00000573842 COL11A2P13942 1736 aaPredicted RBP28.03■■■□□ 2.08
HCFC1R1-205ENST00000573842 ATP10DQ9P241 1426 aa28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 KCNA3P22001 575 aa28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 CHRNA5P30532 468 aa28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 EIF4A1P60842 406 aaKnown RBP28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 DALRD3Q5D0E6 543 aaKnown RBP28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 TSPYL4Q9UJ04 414 aa28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 ZNF652Q9Y2D9 606 aa28.02■■■□□ 2.08
HCFC1R1-205ENST00000573842 GIGYF1O75420 1035 aaPredicted RBP28.01■■■□□ 2.07
HCFC1R1-205ENST00000573842 RRP7AQ9Y3A4 280 aaKnown RBP28.01■■■□□ 2.07
HCFC1R1-205ENST00000573842 NBPF26B4DH59 902 aa28■■■□□ 2.07
HCFC1R1-205ENST00000573842 NBPF10Q6P3W6 841 aaKnown RBP28■■■□□ 2.07
HCFC1R1-205ENST00000573842 NBPF15Q8N660 670 aa28■■■□□ 2.07
HCFC1R1-205ENST00000573842 SETDB2Q96T68 719 aa28■■■□□ 2.07
HCFC1R1-205ENST00000573842 NUP98P52948 1817 aa27.99■■■□□ 2.07
HCFC1R1-205ENST00000573842 NEUROD2Q15784 382 aa27.99■■■□□ 2.07
HCFC1R1-205ENST00000573842 ADAMTS8Q9UP79 889 aa27.99■■■□□ 2.07
HCFC1R1-205ENST00000573842 CACNA1SQ13698 1873 aa27.99■■■□□ 2.07
HCFC1R1-205ENST00000573842 BABAM1Q9NWV8 329 aa27.98■■■□□ 2.07
HCFC1R1-205ENST00000573842 NPHP1O15259 732 aa27.97■■■□□ 2.07
HCFC1R1-205ENST00000573842 CLEC4GQ6UXB4 293 aa27.97■■■□□ 2.07
HCFC1R1-205ENST00000573842 RGL2O15211 777 aa27.96■■■□□ 2.07
HCFC1R1-205ENST00000573842 ARHGAP27Q6ZUM4 889 aa27.96■■■□□ 2.07
HCFC1R1-205ENST00000573842 CNBD1Q8NA66 436 aa27.96■■■□□ 2.07
HCFC1R1-205ENST00000573842 ARFGEF2Q9Y6D5 1785 aa27.96■■■□□ 2.07
HCFC1R1-205ENST00000573842 PRR5LQ6MZQ0 368 aa27.95■■■□□ 2.06
HCFC1R1-205ENST00000573842 C2CD5Q86YS7 1000 aa27.95■■■□□ 2.06
HCFC1R1-205ENST00000573842 SBF1O95248 1867 aa27.95■■■□□ 2.06
HCFC1R1-205ENST00000573842 ST5P78524 1137 aa27.94■■■□□ 2.06
HCFC1R1-205ENST00000573842 ERBB4Q15303 1308 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms