RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SIPA1L3O60292 1781 aaPredicted RBP29.76■■■□□ 2.35
SNF8-216ENST00000573795 COL15A1P39059 1388 aa29.76■■■□□ 2.35
SNF8-216ENST00000573795 PIM2Q9P1W9 311 aa29.74■■■□□ 2.35
SNF8-216ENST00000573795 CHRNA5P30532 468 aa29.73■■■□□ 2.35
SNF8-216ENST00000573795 VSIG10Q8N0Z9 540 aa29.73■■■□□ 2.35
SNF8-216ENST00000573795 ZPR1O75312 459 aa29.72■■■□□ 2.35
SNF8-216ENST00000573795 BCL2L12Q9HB09 334 aa29.72■■■□□ 2.35
SNF8-216ENST00000573795 NARFQ9UHQ1 456 aa29.72■■■□□ 2.35
SNF8-216ENST00000573795 DLEC1Q9Y238 1755 aa29.7■■■□□ 2.35
SNF8-216ENST00000573795 NFIXQ14938 502 aa29.7■■■□□ 2.35
SNF8-216ENST00000573795 DALRD3Q5D0E6 543 aaKnown RBP29.7■■■□□ 2.35
SNF8-216ENST00000573795 SBF1O95248 1867 aa29.7■■■□□ 2.34
SNF8-216ENST00000573795 CNGB1Q14028 1251 aaPredicted RBP29.69■■■□□ 2.34
SNF8-216ENST00000573795 C9orf131Q5VYM1 1079 aa29.69■■■□□ 2.34
SNF8-216ENST00000573795 IL17REQ8NFR9 667 aa29.68■■■□□ 2.34
SNF8-216ENST00000573795 U2SURPO15042 1029 aaKnown RBP29.67■■■□□ 2.34
SNF8-216ENST00000573795 NMRK2Q9NPI5 230 aa29.67■■■□□ 2.34
SNF8-216ENST00000573795 SCN7AQ01118 1682 aa29.65■■■□□ 2.34
SNF8-216ENST00000573795 CANXP27824 592 aaKnown RBP29.64■■■□□ 2.34
SNF8-216ENST00000573795 ZNF496Q96IT1 587 aaPredicted RBP29.64■■■□□ 2.34
SNF8-216ENST00000573795 GNAT3A8MTJ3 354 aa29.63■■■□□ 2.33
SNF8-216ENST00000573795 EIF5P55010 431 aaKnown RBP29.63■■■□□ 2.33
SNF8-216ENST00000573795 TTC5Q8N0Z6 440 aa29.63■■■□□ 2.33
SNF8-216ENST00000573795 GAS2L2Q8NHY3 880 aa29.63■■■□□ 2.33
SNF8-216ENST00000573795 CARMIL3Q8ND23 1372 aa29.63■■■□□ 2.33
SNF8-216ENST00000573795 HEG1Q9ULI3 1381 aa29.63■■■□□ 2.33
SNF8-216ENST00000573795 TOMM70O94826 608 aa29.62■■■□□ 2.33
SNF8-216ENST00000573795 CEMIPQ8WUJ3 1361 aa29.62■■■□□ 2.33
SNF8-216ENST00000573795 SERPINB2P05120 415 aa29.61■■■□□ 2.33
SNF8-216ENST00000573795 ZNF790Q6PG37 636 aa29.61■■■□□ 2.33
SNF8-216ENST00000573795 ANKRD31Q8N7Z5 1873 aa29.6■■■□□ 2.33
SNF8-216ENST00000573795 TEFQ10587 303 aa29.6■■■□□ 2.33
SNF8-216ENST00000573795 STARD3NLO95772 234 aa29.59■■■□□ 2.33
SNF8-216ENST00000573795 PHACTR3Q96KR7 559 aa29.59■■■□□ 2.33
SNF8-216ENST00000573795 RNF181Q9P0P0 153 aa29.59■■■□□ 2.33
SNF8-216ENST00000573795 RSPH6AQ9H0K4 717 aa29.58■■■□□ 2.33
SNF8-216ENST00000573795 RASSF7Q02833 373 aa29.56■■■□□ 2.32
SNF8-216ENST00000573795 TNRC6CQ9HCJ0 1690 aaKnown RBP29.56■■■□□ 2.32
SNF8-216ENST00000573795 COL11A2P13942 1736 aaPredicted RBP29.55■■■□□ 2.32
SNF8-216ENST00000573795 PRKAR2BP31323 418 aa29.55■■■□□ 2.32
SNF8-216ENST00000573795 KCNQ3O43525 872 aa29.54■■■□□ 2.32
SNF8-216ENST00000573795 PRELPP51888 382 aa29.54■■■□□ 2.32
SNF8-216ENST00000573795 TBC1D9BQ66K14 1250 aa29.54■■■□□ 2.32
SNF8-216ENST00000573795 BICDL1Q6ZP65 573 aa29.54■■■□□ 2.32
SNF8-216ENST00000573795 BCORQ6W2J9 1755 aa29.54■■■□□ 2.32
SNF8-216ENST00000573795 A0A087WZG4 1122 aa29.53■■■□□ 2.32
SNF8-216ENST00000573795 WDR90Q96KV7 1748 aa29.52■■■□□ 2.32
SNF8-216ENST00000573795 APLP1P51693 650 aa29.52■■■□□ 2.32
SNF8-216ENST00000573795 C2CD5Q86YS7 1000 aa29.52■■■□□ 2.32
SNF8-216ENST00000573795 TEX13AQ9BXU3 409 aaPredicted RBP29.52■■■□□ 2.32
SNF8-216ENST00000573795 CCDC88AQ3V6T2 1871 aa29.51■■■□□ 2.31
SNF8-216ENST00000573795 IL6STP40189 918 aaPredicted RBP29.51■■■□□ 2.31
SNF8-216ENST00000573795 RBM46Q8TBY0 533 aaKnown RBP29.51■■■□□ 2.31
SNF8-216ENST00000573795 FMNL2Q96PY5 1086 aa29.51■■■□□ 2.31
SNF8-216ENST00000573795 TBC1D2BQ9UPU7 963 aa29.51■■■□□ 2.31
SNF8-216ENST00000573795 TIAM2Q8IVF5 1701 aa29.51■■■□□ 2.31
SNF8-216ENST00000573795 A1BGP04217 495 aa29.5■■■□□ 2.31
SNF8-216ENST00000573795 TTLL6Q8N841 843 aa29.5■■■□□ 2.31
SNF8-216ENST00000573795 KDM2BQ8NHM5 1336 aa29.49■■■□□ 2.31
SNF8-216ENST00000573795 CFAP53Q96M91 514 aa29.49■■■□□ 2.31
SNF8-216ENST00000573795 PPP2R1AP30153 589 aa29.48■■■□□ 2.31
SNF8-216ENST00000573795 DNAJC5GQ8N7S2 189 aa29.48■■■□□ 2.31
SNF8-216ENST00000573795 ZNF330Q9Y3S2 320 aaPredicted RBP29.48■■■□□ 2.31
SNF8-216ENST00000573795 BTBD11A6QL63 1104 aa29.47■■■□□ 2.31
SNF8-216ENST00000573795 PRR5LQ6MZQ0 368 aa29.47■■■□□ 2.31
SNF8-216ENST00000573795 RRAGCQ9HB90 399 aa29.47■■■□□ 2.31
SNF8-216ENST00000573795 ZC3H4Q9UPT8 1303 aaKnown RBP29.46■■■□□ 2.31
SNF8-216ENST00000573795 H0YIN7 160 aa29.46■■■□□ 2.31
SNF8-216ENST00000573795 NFKBIEO00221 500 aa29.46■■■□□ 2.31
SNF8-216ENST00000573795 CAMTA2O94983 1202 aa29.46■■■□□ 2.31
SNF8-216ENST00000573795 IFFO2Q5TF58 517 aa29.46■■■□□ 2.31
SNF8-216ENST00000573795 LMNB1P20700 586 aa29.45■■■□□ 2.31
SNF8-216ENST00000573795 CCDC24Q8N4L8 307 aa29.45■■■□□ 2.31
SNF8-216ENST00000573795 PRAMEF22A3QJZ6 481 aa29.44■■■□□ 2.3
SNF8-216ENST00000573795 USP16Q9Y5T5 823 aa29.44■■■□□ 2.3
SNF8-216ENST00000573795 FER1L6Q2WGJ9 1857 aa29.44■■■□□ 2.3
SNF8-216ENST00000573795 U2AF1L5P0DN76 240 aaPredicted RBP29.43■■■□□ 2.3
SNF8-216ENST00000573795 U2AF1Q01081 240 aaKnown RBP eCLIP29.43■■■□□ 2.3
SNF8-216ENST00000573795 C16orf71Q8IYS4 520 aaPredicted RBP29.43■■■□□ 2.3
SNF8-216ENST00000573795 BRIP1Q9BX63 1249 aa29.43■■■□□ 2.3
SNF8-216ENST00000573795 NUDCQ9Y266 331 aa29.43■■■□□ 2.3
SNF8-216ENST00000573795 PIP4K2AP48426 406 aaPredicted RBP29.42■■■□□ 2.3
SNF8-216ENST00000573795 MCM10Q7L590 875 aa29.42■■■□□ 2.3
SNF8-216ENST00000573795 FSTL1Q12841 308 aa29.41■■■□□ 2.3
SNF8-216ENST00000573795 CACNA1SQ13698 1873 aa29.41■■■□□ 2.3
SNF8-216ENST00000573795 ARFGEF2Q9Y6D5 1785 aa29.4■■■□□ 2.3
SNF8-216ENST00000573795 DICER1Q9UPY3 1922 aaKnown RBP29.39■■■□□ 2.3
SNF8-216ENST00000573795 PDE6BP35913 854 aa29.39■■■□□ 2.3
SNF8-216ENST00000573795 HTRA3P83110 453 aa29.39■■■□□ 2.3
SNF8-216ENST00000573795 DCTN1Q14203 1278 aa29.39■■■□□ 2.3
SNF8-216ENST00000573795 DZIP3Q86Y13 1208 aaKnown RBP29.39■■■□□ 2.3
SNF8-216ENST00000573795 ZNF622Q969S3 477 aaKnown RBP eCLIP29.39■■■□□ 2.3
SNF8-216ENST00000573795 SLX4Q8IY92 1834 aa29.38■■■□□ 2.29
SNF8-216ENST00000573795 PDZRN3Q9UPQ7 1066 aa29.38■■■□□ 2.29
SNF8-216ENST00000573795 GLTPD2A6NH11 291 aa29.37■■■□□ 2.29
SNF8-216ENST00000573795 SETDB2Q96T68 719 aa29.37■■■□□ 2.29
SNF8-216ENST00000573795 DLG5Q8TDM6 1919 aa29.36■■■□□ 2.29
SNF8-216ENST00000573795 CNBD1Q8NA66 436 aa29.36■■■□□ 2.29
SNF8-216ENST00000573795 RTF1Q92541 710 aaKnown RBP29.36■■■□□ 2.29
SNF8-216ENST00000573795 C21orf2O43822 256 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms