RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 C10orf71Q711Q0 1435 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 DPEP1P16444 411 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 DCTN1Q14203 1278 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 TEX13AQ9BXU3 409 aaPredicted RBP27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 NARFQ9UHQ1 456 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 COL15A1P39059 1388 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 PXDNLA1KZ92 1463 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 C4AP0C0L4 1744 aa27.67■■■□□ 2.02
CHRNB1-204ENST00000572857 NEFMP07197 916 aa27.66■■■□□ 2.02
CHRNB1-204ENST00000572857 DDX10Q13206 875 aaKnown RBP27.66■■■□□ 2.02
CHRNB1-204ENST00000572857 VIRMAQ69YN4 1812 aaKnown RBP27.66■■■□□ 2.02
CHRNB1-204ENST00000572857 TM4SF1P30408 202 aa27.65■■■□□ 2.02
CHRNB1-204ENST00000572857 BCS1LQ9Y276 419 aa27.65■■■□□ 2.02
CHRNB1-204ENST00000572857 ZNF330Q9Y3S2 320 aaPredicted RBP27.65■■■□□ 2.02
CHRNB1-204ENST00000572857 POLRMTO00411 1230 aaKnown RBP27.64■■■□□ 2.02
CHRNB1-204ENST00000572857 EIF5P55010 431 aaKnown RBP27.62■■■□□ 2.01
CHRNB1-204ENST00000572857 NFIXQ14938 502 aa27.62■■■□□ 2.01
CHRNB1-204ENST00000572857 BCL2L12Q9HB09 334 aa27.62■■■□□ 2.01
CHRNB1-204ENST00000572857 HTATSF1O43719 755 aaKnown RBP27.61■■■□□ 2.01
CHRNB1-204ENST00000572857 A1BGP04217 495 aa27.61■■■□□ 2.01
CHRNB1-204ENST00000572857 A0A087WZG4 1122 aa27.6■■■□□ 2.01
CHRNB1-204ENST00000572857 UBR2Q8IWV8 1755 aa27.6■■■□□ 2.01
CHRNB1-204ENST00000572857 RALBP1Q15311 655 aa27.59■■■□□ 2.01
CHRNB1-204ENST00000572857 BICDL1Q6ZP65 573 aa27.59■■■□□ 2.01
CHRNB1-204ENST00000572857 KCNA3P22001 575 aa27.58■■■□□ 2.01
CHRNB1-204ENST00000572857 NPM2Q86SE8 214 aaKnown RBP27.58■■■□□ 2.01
CHRNB1-204ENST00000572857 TBC1D2BQ9UPU7 963 aa27.58■■■□□ 2.01
CHRNB1-204ENST00000572857 USP16Q9Y5T5 823 aa27.58■■■□□ 2.01
CHRNB1-204ENST00000572857 CHRNA5P30532 468 aa27.57■■■□□ 2
CHRNB1-204ENST00000572857 ARHGAP27Q6ZUM4 889 aa27.57■■■□□ 2
CHRNB1-204ENST00000572857 PLEKHF1Q96S99 279 aa27.57■■■□□ 2
CHRNB1-204ENST00000572857 PIM2Q9P1W9 311 aa27.57■■■□□ 2
CHRNB1-204ENST00000572857 PRAMEF22A3QJZ6 481 aa27.56■■■□□ 2
CHRNB1-204ENST00000572857 SERPINB2P05120 415 aa27.56■■■□□ 2
CHRNB1-204ENST00000572857 IL6STP40189 918 aaPredicted RBP27.56■■■□□ 2
CHRNB1-204ENST00000572857 TAF7Q15545 349 aaPredicted RBP27.56■■■□□ 2
CHRNB1-204ENST00000572857 MIS18AQ9NYP9 233 aa27.56■■■□□ 2
CHRNB1-204ENST00000572857 SIPA1L3O60292 1781 aaPredicted RBP27.55■■■□□ 2
CHRNB1-204ENST00000572857 KIF13BQ9NQT8 1826 aa27.55■■■□□ 2
CHRNB1-204ENST00000572857 GIGYF1O75420 1035 aaPredicted RBP27.55■■■□□ 2
CHRNB1-204ENST00000572857 SNRPA1P09661 255 aaKnown RBP27.55■■■□□ 2
CHRNB1-204ENST00000572857 ATP10DQ9P241 1426 aa27.55■■■□□ 2
CHRNB1-204ENST00000572857 N4BP2Q86UW6 1770 aaPredicted RBP27.55■■■□□ 2
CHRNB1-204ENST00000572857 PIP4K2AP48426 406 aaPredicted RBP27.54■■■□□ 2
CHRNB1-204ENST00000572857 ZNF526Q8TF50 670 aaPredicted RBP27.54■■■□□ 2
CHRNB1-204ENST00000572857 PNNQ9H307 717 aaKnown RBP27.54■■■□□ 2
CHRNB1-204ENST00000572857 MAPK8IP3Q9UPT6 1336 aa27.53■■■□□ 2
CHRNB1-204ENST00000572857 NFE2L2Q16236 605 aa27.53■■■□□ 2
CHRNB1-204ENST00000572857 C1QTNF8P60827 252 aa27.52■■■□□ 2
CHRNB1-204ENST00000572857 DALRD3Q5D0E6 543 aaKnown RBP27.52■■■□□ 2
CHRNB1-204ENST00000572857 TBC1D9BQ66K14 1250 aa27.52■■■□□ 2
CHRNB1-204ENST00000572857 KIAA1551Q9HCM1 1747 aa27.52■■■□□ 2
CHRNB1-204ENST00000572857 THUMPD2Q9BTF0 503 aaKnown RBP27.51■■□□□ 1.99
CHRNB1-204ENST00000572857 GPBP1L1Q9HC44 474 aaPredicted RBP27.5■■□□□ 1.99
CHRNB1-204ENST00000572857 DZIP3Q86Y13 1208 aaKnown RBP27.49■■□□□ 1.99
CHRNB1-204ENST00000572857 ADCY9O60503 1353 aa27.48■■□□□ 1.99
CHRNB1-204ENST00000572857 CAMTA2O94983 1202 aa27.47■■□□□ 1.99
CHRNB1-204ENST00000572857 PNISRQ8TF01 805 aaKnown RBP27.47■■□□□ 1.99
CHRNB1-204ENST00000572857 MYBBP1AQ9BQG0 1328 aaKnown RBP27.46■■□□□ 1.99
CHRNB1-204ENST00000572857 CCDC24Q8N4L8 307 aa27.45■■□□□ 1.98
CHRNB1-204ENST00000572857 SETDB2Q96T68 719 aa27.45■■□□□ 1.98
CHRNB1-204ENST00000572857 C2CD5Q86YS7 1000 aa27.44■■□□□ 1.98
CHRNB1-204ENST00000572857 NBPF26B4DH59 902 aa27.43■■□□□ 1.98
CHRNB1-204ENST00000572857 NBPF10Q6P3W6 841 aaKnown RBP27.43■■□□□ 1.98
CHRNB1-204ENST00000572857 NBPF15Q8N660 670 aa27.43■■□□□ 1.98
CHRNB1-204ENST00000572857 CARMIL3Q8ND23 1372 aa27.43■■□□□ 1.98
CHRNB1-204ENST00000572857 H0YIN7 160 aa27.42■■□□□ 1.98
CHRNB1-204ENST00000572857 NPHP1O15259 732 aa27.42■■□□□ 1.98
CHRNB1-204ENST00000572857 RIPK4P57078 832 aa27.42■■□□□ 1.98
CHRNB1-204ENST00000572857 SENP3-EIF4A1A0A087X0R7 540 aa27.4■■□□□ 1.98
CHRNB1-204ENST00000572857 EIF4A1P60842 406 aaKnown RBP27.4■■□□□ 1.98
CHRNB1-204ENST00000572857 C9orf131Q5VYM1 1079 aa27.4■■□□□ 1.98
CHRNB1-204ENST00000572857 PRR5LQ6MZQ0 368 aa27.4■■□□□ 1.98
CHRNB1-204ENST00000572857 CCDC146Q8IYE0 955 aa27.39■■□□□ 1.98
CHRNB1-204ENST00000572857 TTLL6Q8N841 843 aa27.39■■□□□ 1.98
CHRNB1-204ENST00000572857 NGEFQ8N5V2 710 aa27.38■■□□□ 1.97
CHRNB1-204ENST00000572857 CNBD1Q8NA66 436 aa27.38■■□□□ 1.97
CHRNB1-204ENST00000572857 BRIP1Q9BX63 1249 aa27.38■■□□□ 1.97
CHRNB1-204ENST00000572857 RRP7AQ9Y3A4 280 aaKnown RBP27.38■■□□□ 1.97
CHRNB1-204ENST00000572857 AFDNP55196 1824 aaKnown RBP27.38■■□□□ 1.97
CHRNB1-204ENST00000572857 PDE6BP35913 854 aa27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 TMPOP42166 694 aaKnown RBP27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 WDR43Q15061 677 aaKnown RBP eCLIP27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 CLEC4GQ6UXB4 293 aa27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 ZNF622Q969S3 477 aaKnown RBP eCLIP27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
CHRNB1-204ENST00000572857 NRXN2Q9P2S2 1712 aa27.36■■□□□ 1.97
CHRNB1-204ENST00000572857 NEUROD2Q15784 382 aa27.36■■□□□ 1.97
CHRNB1-204ENST00000572857 TSPYL4Q9UJ04 414 aa27.36■■□□□ 1.97
CHRNB1-204ENST00000572857 BRCA1P38398 1863 aaKnown RBP27.36■■□□□ 1.97
CHRNB1-204ENST00000572857 SCN7AQ01118 1682 aa27.35■■□□□ 1.97
CHRNB1-204ENST00000572857 ST5P78524 1137 aa27.34■■□□□ 1.97
CHRNB1-204ENST00000572857 NBPF5PQ86XG9 351 aaPredicted RBP27.34■■□□□ 1.97
CHRNB1-204ENST00000572857 RNF181Q9P0P0 153 aa27.34■■□□□ 1.97
CHRNB1-204ENST00000572857 DLG5Q8TDM6 1919 aa27.33■■□□□ 1.97
CHRNB1-204ENST00000572857 LMOD3Q0VAK6 560 aa27.33■■□□□ 1.97
CHRNB1-204ENST00000572857 PRKRIP1Q9H875 184 aaPredicted RBP27.33■■□□□ 1.97
CHRNB1-204ENST00000572857 RASSF7Q02833 373 aa27.32■■□□□ 1.96
CHRNB1-204ENST00000572857 PDZRN3Q9UPQ7 1066 aa27.32■■□□□ 1.96
CHRNB1-204ENST00000572857 NIP7Q9Y221 180 aaKnown RBP eCLIP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms