RNA–Protein interactions for RNA: ENST00000571617.1

P4HB-216, Transcript of prolyl 4-hydroxylase subunit beta, humanhuman

TSL 3

Gene P4HB, Length 505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
P4HB-216ENST00000571617 COL15A1P39059 1388 aa27.86■■■□□ 2.05
P4HB-216ENST00000571617 C10orf71Q711Q0 1435 aa27.86■■■□□ 2.05
P4HB-216ENST00000571617 FMNL2Q96PY5 1086 aa27.86■■■□□ 2.05
P4HB-216ENST00000571617 PLEKHF1Q96S99 279 aa27.86■■■□□ 2.05
P4HB-216ENST00000571617 PARP3Q9Y6F1 533 aa27.86■■■□□ 2.05
P4HB-216ENST00000571617 N4BP2Q86UW6 1770 aaPredicted RBP27.85■■■□□ 2.05
P4HB-216ENST00000571617 ZPR1O75312 459 aa27.84■■■□□ 2.05
P4HB-216ENST00000571617 FKBP8Q14318 412 aa27.84■■■□□ 2.05
P4HB-216ENST00000571617 PNNQ9H307 717 aaKnown RBP27.84■■■□□ 2.05
P4HB-216ENST00000571617 MYBBP1AQ9BQG0 1328 aaKnown RBP27.83■■■□□ 2.05
P4HB-216ENST00000571617 KCNQ3O43525 872 aa27.82■■■□□ 2.04
P4HB-216ENST00000571617 DCTN1Q14203 1278 aa27.82■■■□□ 2.04
P4HB-216ENST00000571617 USPL1Q5W0Q7 1092 aa27.82■■■□□ 2.04
P4HB-216ENST00000571617 NARFQ9UHQ1 456 aa27.82■■■□□ 2.04
P4HB-216ENST00000571617 PXDNLA1KZ92 1463 aa27.82■■■□□ 2.04
P4HB-216ENST00000571617 BRCA1P38398 1863 aaKnown RBP27.81■■■□□ 2.04
P4HB-216ENST00000571617 CANXP27824 592 aaKnown RBP27.8■■■□□ 2.04
P4HB-216ENST00000571617 EIF5P55010 431 aaKnown RBP27.8■■■□□ 2.04
P4HB-216ENST00000571617 TGFB2P61812 414 aa27.8■■■□□ 2.04
P4HB-216ENST00000571617 AFDNP55196 1824 aaKnown RBP27.79■■■□□ 2.04
P4HB-216ENST00000571617 MAPK8IP3Q9UPT6 1336 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 TM4SF1P30408 202 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 ZEB1P37275 1124 aaPredicted RBP27.78■■■□□ 2.04
P4HB-216ENST00000571617 DDR1Q08345 913 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 NFE2L2Q16236 605 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 KDM3BQ7LBC6 1761 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 SCN7AQ01118 1682 aa27.78■■■□□ 2.04
P4HB-216ENST00000571617 A0A087WZG4 1122 aa27.77■■■□□ 2.04
P4HB-216ENST00000571617 ZNF784Q8NCA9 323 aaPredicted RBP27.77■■■□□ 2.04
P4HB-216ENST00000571617 NRXN2Q9P2S2 1712 aa27.77■■■□□ 2.04
P4HB-216ENST00000571617 TAF7Q15545 349 aaPredicted RBP27.76■■■□□ 2.03
P4HB-216ENST00000571617 POLRMTO00411 1230 aaKnown RBP27.75■■■□□ 2.03
P4HB-216ENST00000571617 IL6STP40189 918 aaPredicted RBP27.74■■■□□ 2.03
P4HB-216ENST00000571617 BCL2L12Q9HB09 334 aa27.74■■■□□ 2.03
P4HB-216ENST00000571617 LAMB4A4D0S4 1761 aa27.73■■■□□ 2.03
P4HB-216ENST00000571617 SNRPA1P09661 255 aaKnown RBP27.73■■■□□ 2.03
P4HB-216ENST00000571617 WWC3Q9ULE0 1092 aa27.73■■■□□ 2.03
P4HB-216ENST00000571617 A0A0G2JLW4 131 aa27.72■■■□□ 2.03
P4HB-216ENST00000571617 A1BGP04217 495 aa27.72■■■□□ 2.03
P4HB-216ENST00000571617 NFIXQ14938 502 aa27.72■■■□□ 2.03
P4HB-216ENST00000571617 USP16Q9Y5T5 823 aa27.72■■■□□ 2.03
P4HB-216ENST00000571617 BCORQ6W2J9 1755 aa27.72■■■□□ 2.03
P4HB-216ENST00000571617 PNISRQ8TF01 805 aaKnown RBP27.71■■■□□ 2.03
P4HB-216ENST00000571617 ARFGEF1Q9Y6D6 1849 aa27.71■■■□□ 2.03
P4HB-216ENST00000571617 DPEP1P16444 411 aa27.7■■■□□ 2.02
P4HB-216ENST00000571617 PRKRIP1Q9H875 184 aaPredicted RBP27.7■■■□□ 2.02
P4HB-216ENST00000571617 PRAMEF22A3QJZ6 481 aa27.69■■■□□ 2.02
P4HB-216ENST00000571617 ZNF330Q9Y3S2 320 aaPredicted RBP27.69■■■□□ 2.02
P4HB-216ENST00000571617 NPM2Q86SE8 214 aaKnown RBP27.68■■■□□ 2.02
P4HB-216ENST00000571617 MIS18AQ9NYP9 233 aa27.68■■■□□ 2.02
P4HB-216ENST00000571617 KCNA3P22001 575 aa27.66■■■□□ 2.02
P4HB-216ENST00000571617 THUMPD2Q9BTF0 503 aaKnown RBP27.66■■■□□ 2.02
P4HB-216ENST00000571617 TBC1D2BQ9UPU7 963 aa27.66■■■□□ 2.02
P4HB-216ENST00000571617 DLEC1Q9Y238 1755 aa27.65■■■□□ 2.02
P4HB-216ENST00000571617 BCS1LQ9Y276 419 aa27.65■■■□□ 2.02
P4HB-216ENST00000571617 SERPINB2P05120 415 aa27.64■■■□□ 2.02
P4HB-216ENST00000571617 RIPK4P57078 832 aa27.64■■■□□ 2.02
P4HB-216ENST00000571617 TMPOP42166 694 aaKnown RBP27.63■■■□□ 2.01
P4HB-216ENST00000571617 WDR43Q15061 677 aaKnown RBP eCLIP27.63■■■□□ 2.016e-8■□□□□ 9.5
P4HB-216ENST00000571617 CAMTA2O94983 1202 aa27.62■■■□□ 2.01
P4HB-216ENST00000571617 TBC1D9BQ66K14 1250 aa27.62■■■□□ 2.01
P4HB-216ENST00000571617 DZIP3Q86Y13 1208 aaKnown RBP27.62■■■□□ 2.01
P4HB-216ENST00000571617 PIM2Q9P1W9 311 aa27.62■■■□□ 2.01
P4HB-216ENST00000571617 PIP4K2AP48426 406 aaPredicted RBP27.61■■■□□ 2.01
P4HB-216ENST00000571617 EIF4A1P60842 406 aaKnown RBP27.61■■■□□ 2.01
P4HB-216ENST00000571617 LMOD3Q0VAK6 560 aa27.61■■■□□ 2.01
P4HB-216ENST00000571617 BICDL1Q6ZP65 573 aa27.61■■■□□ 2.01
P4HB-216ENST00000571617 ADCY9O60503 1353 aa27.6■■■□□ 2.01
P4HB-216ENST00000571617 ANKRD31Q8N7Z5 1873 aa27.6■■■□□ 2.01
P4HB-216ENST00000571617 NBPF26B4DH59 902 aa27.6■■■□□ 2.01
P4HB-216ENST00000571617 GIGYF1O75420 1035 aaPredicted RBP27.6■■■□□ 2.01
P4HB-216ENST00000571617 NBPF10Q6P3W6 841 aaKnown RBP27.6■■■□□ 2.01
P4HB-216ENST00000571617 NBPF15Q8N660 670 aa27.6■■■□□ 2.01
P4HB-216ENST00000571617 CARMIL3Q8ND23 1372 aa27.6■■■□□ 2.01
P4HB-216ENST00000571617 CHRNA5P30532 468 aa27.59■■■□□ 2.01
P4HB-216ENST00000571617 CCDC146Q8IYE0 955 aa27.59■■■□□ 2.01
P4HB-216ENST00000571617 RUNDC1Q96C34 613 aa27.59■■■□□ 2.01
P4HB-216ENST00000571617 DALRD3Q5D0E6 543 aaKnown RBP27.57■■■□□ 2
P4HB-216ENST00000571617 BABAM1Q9NWV8 329 aa27.57■■■□□ 2
P4HB-216ENST00000571617 ADAMTS8Q9UP79 889 aa27.57■■■□□ 2
P4HB-216ENST00000571617 ATP10DQ9P241 1426 aa27.57■■■□□ 2
P4HB-216ENST00000571617 RGL2O15211 777 aa27.56■■■□□ 2
P4HB-216ENST00000571617 CLEC4GQ6UXB4 293 aa27.56■■■□□ 2
P4HB-216ENST00000571617 SETDB2Q96T68 719 aa27.56■■■□□ 2
P4HB-216ENST00000571617 TSPYL4Q9UJ04 414 aa27.56■■■□□ 2
P4HB-216ENST00000571617 ZNF652Q9Y2D9 606 aa27.54■■■□□ 2
P4HB-216ENST00000571617 RRP7AQ9Y3A4 280 aaKnown RBP27.54■■■□□ 2
P4HB-216ENST00000571617 ARHGAP27Q6ZUM4 889 aa27.53■■■□□ 2
P4HB-216ENST00000571617 NEUROD2Q15784 382 aa27.52■■■□□ 2
P4HB-216ENST00000571617 PRR5LQ6MZQ0 368 aa27.52■■■□□ 2
P4HB-216ENST00000571617 NUP98P52948 1817 aa27.52■■■□□ 2
P4HB-216ENST00000571617 COL11A2P13942 1736 aaPredicted RBP27.51■■□□□ 1.99
P4HB-216ENST00000571617 BRIP1Q9BX63 1249 aa27.51■■□□□ 1.99
P4HB-216ENST00000571617 SBF1O95248 1867 aa27.51■■□□□ 1.99
P4HB-216ENST00000571617 C2CD5Q86YS7 1000 aa27.5■■□□□ 1.99
P4HB-216ENST00000571617 CNBD1Q8NA66 436 aa27.5■■□□□ 1.99
P4HB-216ENST00000571617 TRIM35Q9UPQ4 493 aa27.5■■□□□ 1.99
P4HB-216ENST00000571617 PDZRN3Q9UPQ7 1066 aa27.5■■□□□ 1.99
P4HB-216ENST00000571617 ERBB4Q15303 1308 aa27.49■■□□□ 1.99
P4HB-216ENST00000571617 H0YIN7 160 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms