RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 PI4KAP2A4QPH2 592 aa24.33■■□□□ 1.49
RPAIN-210ENST00000571613 NUCB1Q02818 461 aa24.33■■□□□ 1.49
RPAIN-210ENST00000571613 PI4KAP1Q8N8J0 262 aa24.33■■□□□ 1.49
RPAIN-210ENST00000571613 HDAC5Q9UQL6 1122 aa24.33■■□□□ 1.49
RPAIN-210ENST00000571613 TNS2Q63HR2 1409 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 PRAMEF22A3QJZ6 481 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 FAM161AQ3B820 660 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 CEP85Q6P2H3 762 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 SKAP1Q86WV1 359 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 SIRT2Q8IXJ6 389 aa24.32■■□□□ 1.48
RPAIN-210ENST00000571613 BARGINQ6ZT62 677 aa24.31■■□□□ 1.48
RPAIN-210ENST00000571613 SPATA31A5Q5VU36 1347 aa24.31■■□□□ 1.48
RPAIN-210ENST00000571613 SPATA31A7Q8IWB4 1347 aa24.31■■□□□ 1.48
RPAIN-210ENST00000571613 LRP6O75581 1613 aa24.31■■□□□ 1.48
RPAIN-210ENST00000571613 PDIA6Q15084 440 aa24.3■■□□□ 1.48
RPAIN-210ENST00000571613 ALDH1L1O75891 902 aa24.3■■□□□ 1.48
RPAIN-210ENST00000571613 DCTPP1Q9H773 170 aa24.3■■□□□ 1.48
RPAIN-210ENST00000571613 BEND3Q5T5X7 828 aa24.29■■□□□ 1.48
RPAIN-210ENST00000571613 UNC5CLQ8IV45 518 aa24.29■■□□□ 1.48
RPAIN-210ENST00000571613 IBTKQ9P2D0 1353 aaPredicted RBP24.29■■□□□ 1.48
RPAIN-210ENST00000571613 WNK3Q9BYP7 1800 aa24.29■■□□□ 1.48
RPAIN-210ENST00000571613 ANXA1P04083 346 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 UBTFL1P0CB47 393 aaPredicted RBP24.28■■□□□ 1.48
RPAIN-210ENST00000571613 PROSER3Q2NL68 480 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 CHD1LQ86WJ1 897 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 TEX13AQ9BXU3 409 aaPredicted RBP24.28■■□□□ 1.48
RPAIN-210ENST00000571613 USP16Q9Y5T5 823 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 ADCY9O60503 1353 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 PAPPAQ13219 1627 aa24.28■■□□□ 1.48
RPAIN-210ENST00000571613 DDB1Q16531 1140 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 C5P01031 1676 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 VSIG10Q8N0Z9 540 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 USP44Q9H0E7 712 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 ZBTB47Q9UFB7 747 aaPredicted RBP24.27■■□□□ 1.48
RPAIN-210ENST00000571613 MAP3K2Q9Y2U5 619 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 UBR2Q8IWV8 1755 aa24.27■■□□□ 1.48
RPAIN-210ENST00000571613 NGLY1Q96IV0 654 aa24.26■■□□□ 1.47
RPAIN-210ENST00000571613 LAMB4A4D0S4 1761 aa24.25■■□□□ 1.47
RPAIN-210ENST00000571613 ANKRD45Q5TZF3 282 aa24.25■■□□□ 1.47
RPAIN-210ENST00000571613 CCDC9Q9Y3X0 531 aaKnown RBP24.25■■□□□ 1.47
RPAIN-210ENST00000571613 KCPQ6ZWJ8 1503 aa24.25■■□□□ 1.47
RPAIN-210ENST00000571613 LINS1Q8NG48 757 aa24.24■■□□□ 1.47
RPAIN-210ENST00000571613 NEXNQ0ZGT2 675 aa24.24■■□□□ 1.47
RPAIN-210ENST00000571613 VPS72Q15906 364 aa24.24■■□□□ 1.47
RPAIN-210ENST00000571613 RIC3Q7Z5B4 369 aa24.24■■□□□ 1.47
RPAIN-210ENST00000571613 FNBP4Q8N3X1 1017 aaPredicted RBP24.24■■□□□ 1.47
RPAIN-210ENST00000571613 MYL6BP14649 208 aa24.23■■□□□ 1.47
RPAIN-210ENST00000571613 ATP8B2P98198 1209 aa24.23■■□□□ 1.47
RPAIN-210ENST00000571613 PIGBQ92521 554 aa24.23■■□□□ 1.47
RPAIN-210ENST00000571613 TOGARAM1Q9Y4F4 1720 aa24.23■■□□□ 1.47
RPAIN-210ENST00000571613 XAGE3Q8WTP9 111 aa24.22■■□□□ 1.47
RPAIN-210ENST00000571613 C8orf37Q96NL8 207 aa24.22■■□□□ 1.47
RPAIN-210ENST00000571613 GLI3P10071 1580 aa24.22■■□□□ 1.47
RPAIN-210ENST00000571613 AIMP1Q12904 312 aaKnown RBP24.21■■□□□ 1.47
RPAIN-210ENST00000571613 ANKRD13DQ6ZTN6 518 aa24.21■■□□□ 1.47
RPAIN-210ENST00000571613 COPS6Q7L5N1 327 aa24.21■■□□□ 1.47
RPAIN-210ENST00000571613 BCL9O00512 1426 aa24.21■■□□□ 1.47
RPAIN-210ENST00000571613 LRP10Q7Z4F1 713 aa24.21■■□□□ 1.47
RPAIN-210ENST00000571613 LNPKQ9C0E8 428 aa24.21■■□□□ 1.47
RPAIN-210ENST00000571613 PTCD1O75127 700 aaKnown RBP24.2■■□□□ 1.46
RPAIN-210ENST00000571613 C8orf34Q49A92 452 aa24.2■■□□□ 1.46
RPAIN-210ENST00000571613 C9orf78Q9NZ63 289 aaPredicted RBP24.19■■□□□ 1.46
RPAIN-210ENST00000571613 LRRFIP2Q9Y608 721 aaKnown RBP24.19■■□□□ 1.46
RPAIN-210ENST00000571613 METTL22Q9BUU2 404 aaPredicted RBP24.18■■□□□ 1.46
RPAIN-210ENST00000571613 ATG3Q9NT62 314 aa24.18■■□□□ 1.46
RPAIN-210ENST00000571613 STARD3NLO95772 234 aa24.18■■□□□ 1.46
RPAIN-210ENST00000571613 BCL9LQ86UU0 1499 aa24.17■■□□□ 1.46
RPAIN-210ENST00000571613 PLBD2Q8NHP8 589 aa24.17■■□□□ 1.46
RPAIN-210ENST00000571613 ASAP1Q9ULH1 1129 aa24.16■■□□□ 1.46
RPAIN-210ENST00000571613 ITGB4P16144 1822 aa24.16■■□□□ 1.46
RPAIN-210ENST00000571613 UTYO14607 1347 aa24.16■■□□□ 1.46
RPAIN-210ENST00000571613 ANP32AP39687 249 aaKnown RBP24.15■■□□□ 1.46
RPAIN-210ENST00000571613 SSH3Q8TE77 659 aa24.15■■□□□ 1.46
RPAIN-210ENST00000571613 GRM8O00222 908 aa24.14■■□□□ 1.45
RPAIN-210ENST00000571613 NBPF7P0C2Y1 421 aaPredicted RBP24.14■■□□□ 1.45
RPAIN-210ENST00000571613 USP21Q9UK80 565 aa24.14■■□□□ 1.45
RPAIN-210ENST00000571613 PRIM1P49642 420 aaKnown RBP24.13■■□□□ 1.45
RPAIN-210ENST00000571613 SYTL4Q96C24 671 aaPredicted RBP24.13■■□□□ 1.45
RPAIN-210ENST00000571613 NBPF26B4DH59 902 aa24.12■■□□□ 1.45
RPAIN-210ENST00000571613 MTX1Q13505 466 aa24.12■■□□□ 1.45
RPAIN-210ENST00000571613 NBPF14Q5TI25 921 aa24.12■■□□□ 1.45
RPAIN-210ENST00000571613 NBPF10Q6P3W6 841 aaKnown RBP24.12■■□□□ 1.45
RPAIN-210ENST00000571613 NBPF15Q8N660 670 aa24.12■■□□□ 1.45
RPAIN-210ENST00000571613 MARCH10Q8NA82 808 aaPredicted RBP24.12■■□□□ 1.45
RPAIN-210ENST00000571613 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.12■■□□□ 1.45
RPAIN-210ENST00000571613 NEURL1BA8MQ27 555 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 HSPA1LP34931 641 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 CWF19L2Q2TBE0 894 aaKnown RBP24.11■■□□□ 1.45
RPAIN-210ENST00000571613 MEX3CQ5U5Q3 659 aaKnown RBP24.11■■□□□ 1.45
RPAIN-210ENST00000571613 RBM42Q9BTD8 480 aaKnown RBP24.11■■□□□ 1.45
RPAIN-210ENST00000571613 PNMA6EA0A0J9YXQ4 647 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 RAB11FIP3O75154 756 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 A1BGP04217 495 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 POLA2Q14181 598 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 HSP90AB4PQ58FF6 505 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 BMP2KLQ5H9B9 411 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 MYD88Q99836 296 aa24.11■■□□□ 1.45
RPAIN-210ENST00000571613 IGKV5-2P06315 115 aa24.1■■□□□ 1.45
RPAIN-210ENST00000571613 PPP1R42Q7Z4L9 355 aa24.1■■□□□ 1.45
RPAIN-210ENST00000571613 GCKRQ14397 625 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms