RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 ZBTB7BO15156 539 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 ADCY5O95622 1261 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 RIMS2Q9UQ26 1411 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 HCLS1P14317 486 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 CFAP45Q9UL16 551 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 ZKSCAN5Q9Y2L8 839 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 STX6O43752 255 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 GLI2P10070 1586 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 SPG7Q9UQ90 795 aa13.17□□□□□ -0.3
PCDHGA4-201ENST00000571252 DYNC1I1O14576 645 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 OLFM4Q6UX06 510 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 KIAA1210Q9ULL0 1709 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 PPIP5K1Q6PFW1 1433 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 PDILTQ8N807 584 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 PRDM10Q9NQV6 1147 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 MYOM1P52179 1685 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 NRXN1Q9ULB1 1477 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 A0A0U1RQG5 324 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 DDX11Q96FC9 970 aa13.16□□□□□ -0.3
PCDHGA4-201ENST00000571252 OFD1O75665 1012 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 KRT32Q14532 448 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 UBE2HP62256 183 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 CBX1P83916 185 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 TULP4Q9NRJ4 1543 aa13.15□□□□□ -0.3
PCDHGA4-201ENST00000571252 CKAP2LQ8IYA6 745 aa13.15□□□□□ -0.31
PCDHGA4-201ENST00000571252 CEP57L1Q8IYX8 460 aa13.15□□□□□ -0.31
PCDHGA4-201ENST00000571252 USP26Q9BXU7 913 aa13.15□□□□□ -0.31
PCDHGA4-201ENST00000571252 DHX16O60231 1041 aaKnown RBP13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 HS1BP3Q53T59 392 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 KRT24Q2M2I5 525 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 ANKRD20A12PQ8NF67 263 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 CCDC66A2RUB6 948 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 NCBP3Q53F19 620 aaKnown RBP13.14□□□□□ -0.31
PCDHGA4-201ENST00000571252 KDM4AO75164 1064 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 ZNF830Q96NB3 372 aaPredicted RBP13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 ADGRB1O14514 1584 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 IPO7O95373 1038 aaKnown RBP13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 ANAPC15P60006 121 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 GJB2P29033 226 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 HSP90AB2PQ58FF8 381 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 GIMAP6Q6P9H5 292 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 PPP1R42Q7Z4L9 355 aa13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 TFIP11Q9UBB9 837 aaKnown RBP13.13□□□□□ -0.31
PCDHGA4-201ENST00000571252 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 MYL6BP14649 208 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 MARCH6O60337 910 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 ATP2B1P20020 1258 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 USP19O94966 1318 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 SERPINC1P01008 464 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 ZSCAN22P10073 491 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 PRIMPOLQ96LW4 560 aa13.12□□□□□ -0.31
PCDHGA4-201ENST00000571252 ACEP12821 1306 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 IL13P35225 146 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 ESCO1Q5FWF5 840 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 CCP110O43303 1012 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 RBSNQ9H1K0 784 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 ECHDC1Q9NTX5 307 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 ERICH2A1L162 156 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 NOC3LQ8WTT2 800 aaKnown RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 C16orf45Q96MC5 204 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 DCAF8L1A6NGE4 600 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 NOLC1Q14978 699 aaKnown RBP eCLIP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 OTUD7AQ8TE49 926 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 CCDC8Q9H0W5 538 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 TTC12Q9H892 705 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 CNPY2Q9Y2B0 182 aa13.11□□□□□ -0.31
PCDHGA4-201ENST00000571252 ZFYVE9O95405 1425 aa13.1□□□□□ -0.31
PCDHGA4-201ENST00000571252 JMYQ8N9B5 988 aa13.1□□□□□ -0.31
PCDHGA4-201ENST00000571252 PTPN14Q15678 1187 aa13.1□□□□□ -0.31
PCDHGA4-201ENST00000571252 RHPN1Q8TCX5 695 aa13.1□□□□□ -0.31
PCDHGA4-201ENST00000571252 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
PCDHGA4-201ENST00000571252 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 TNNT1P13805 278 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 DDX19AQ9NUU7 478 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 TTC21BQ7Z4L5 1316 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 HSP90B2PQ58FF3 399 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 CCDC70Q6NSX1 233 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 AMOTL1Q8IY63 956 aa13.09□□□□□ -0.31
PCDHGA4-201ENST00000571252 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms