RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 C8orf58Q8NAV2 365 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 CHMP4AQ9BY43 222 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 ABCC4O15439 1325 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 PAPPAQ13219 1627 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 CYP27B1O15528 508 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 SLC15A2Q16348 729 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 TSPYL6Q8N831 410 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 STK32BQ9NY57 414 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 DAXXQ9UER7 740 aaPredicted RBP24.59■■□□□ 1.53
SPNS2-203ENST00000570979 PTPRCP08575 1304 aa24.59■■□□□ 1.53
SPNS2-203ENST00000570979 UPF2Q9HAU5 1272 aaKnown RBP24.58■■□□□ 1.53
SPNS2-203ENST00000570979 VIRMAQ69YN4 1812 aaKnown RBP24.58■■□□□ 1.53
SPNS2-203ENST00000570979 SKAP1Q86WV1 359 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 KCNQ4P56696 695 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 MTHFSDQ2M296 383 aaKnown RBP24.57■■□□□ 1.52
SPNS2-203ENST00000570979 GCC1Q96CN9 775 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 PKD1L3Q7Z443 1732 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
SPNS2-203ENST00000570979 ZBTB7BO15156 539 aaPredicted RBP24.56■■□□□ 1.52
SPNS2-203ENST00000570979 DCTN1Q14203 1278 aa24.56■■□□□ 1.52
SPNS2-203ENST00000570979 SPON1Q9HCB6 807 aa24.56■■□□□ 1.52
SPNS2-203ENST00000570979 GNAT3A8MTJ3 354 aa24.55■■□□□ 1.52
SPNS2-203ENST00000570979 ZNF827Q17R98 1081 aa24.55■■□□□ 1.52
SPNS2-203ENST00000570979 ELL2O00472 640 aaPredicted RBP24.54■■□□□ 1.52
SPNS2-203ENST00000570979 ZBTB7AO95365 584 aa24.54■■□□□ 1.52
SPNS2-203ENST00000570979 MCM10Q7L590 875 aa24.54■■□□□ 1.52
SPNS2-203ENST00000570979 TOGARAM1Q9Y4F4 1720 aa24.52■■□□□ 1.52
SPNS2-203ENST00000570979 LY75O60449 1722 aa24.52■■□□□ 1.52
SPNS2-203ENST00000570979 INTS3Q68E01 1043 aaKnown RBP24.52■■□□□ 1.52
SPNS2-203ENST00000570979 TSPYL4Q9UJ04 414 aa24.52■■□□□ 1.52
SPNS2-203ENST00000570979 EIF5BO60841 1220 aaKnown RBP24.51■■□□□ 1.51
SPNS2-203ENST00000570979 SLC27A3Q5K4L6 730 aa24.5■■□□□ 1.51
SPNS2-203ENST00000570979 AKT1S1Q96B36 256 aa24.49■■□□□ 1.51
SPNS2-203ENST00000570979 ATF5Q9Y2D1 282 aaPredicted RBP24.49■■□□□ 1.51
SPNS2-203ENST00000570979 MAP3K5Q99683 1374 aa24.48■■□□□ 1.51
SPNS2-203ENST00000570979 SPG7Q9UQ90 795 aa24.48■■□□□ 1.51
SPNS2-203ENST00000570979 ITGB4P16144 1822 aa24.48■■□□□ 1.51
SPNS2-203ENST00000570979 NUCB1Q02818 461 aa24.47■■□□□ 1.51
SPNS2-203ENST00000570979 NKX1-1Q15270 411 aaPredicted RBP24.47■■□□□ 1.51
SPNS2-203ENST00000570979 PTGER2P43116 358 aa24.47■■□□□ 1.51
SPNS2-203ENST00000570979 MPRIPQ6WCQ1 1025 aa24.47■■□□□ 1.51
SPNS2-203ENST00000570979 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
SPNS2-203ENST00000570979 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.46■■□□□ 1.51
SPNS2-203ENST00000570979 PPP1R1BQ9UD71 204 aaPredicted RBP24.46■■□□□ 1.51
SPNS2-203ENST00000570979 CCNL1Q9UK58 526 aaPredicted RBP24.45■■□□□ 1.5
SPNS2-203ENST00000570979 TUBGCP6Q96RT7 1819 aa24.44■■□□□ 1.5
SPNS2-203ENST00000570979 TAF7Q15545 349 aaPredicted RBP24.44■■□□□ 1.5
SPNS2-203ENST00000570979 PHKG2P15735 406 aa24.44■■□□□ 1.5
SPNS2-203ENST00000570979 AMOTQ4VCS5 1084 aa24.44■■□□□ 1.5
SPNS2-203ENST00000570979 CCDC30Q5VVM6 783 aa24.44■■□□□ 1.5
SPNS2-203ENST00000570979 RPAP2Q8IXW5 612 aaPredicted RBP24.44■■□□□ 1.5
SPNS2-203ENST00000570979 CHD1LQ86WJ1 897 aa24.43■■□□□ 1.5
SPNS2-203ENST00000570979 PIGBQ92521 554 aa24.43■■□□□ 1.5
SPNS2-203ENST00000570979 CCT4P50991 539 aaKnown RBP24.42■■□□□ 1.5
SPNS2-203ENST00000570979 BECN1Q14457 450 aa24.42■■□□□ 1.5
SPNS2-203ENST00000570979 SGIP1Q9BQI5 828 aa24.42■■□□□ 1.5
SPNS2-203ENST00000570979 MTFR1LQ9H019 292 aa24.42■■□□□ 1.5
SPNS2-203ENST00000570979 CACNA1FO60840 1977 aa24.41■■□□□ 1.5
SPNS2-203ENST00000570979 PALLDQ8WX93 1383 aa24.41■■□□□ 1.5
SPNS2-203ENST00000570979 SLC4A2P04920 1241 aa24.41■■□□□ 1.5
SPNS2-203ENST00000570979 PLEKHO1Q53GL0 409 aaPredicted RBP24.41■■□□□ 1.5
SPNS2-203ENST00000570979 IFNL2Q8IZJ0 200 aa24.41■■□□□ 1.5
SPNS2-203ENST00000570979 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
SPNS2-203ENST00000570979 QSER1Q2KHR3 1735 aa24.4■■□□□ 1.5
SPNS2-203ENST00000570979 TFCP2L1Q9NZI6 479 aa24.39■■□□□ 1.49
SPNS2-203ENST00000570979 HOXB7P09629 217 aa24.37■■□□□ 1.49
SPNS2-203ENST00000570979 TAF1LQ8IZX4 1826 aa24.36■■□□□ 1.49
SPNS2-203ENST00000570979 C5P01031 1676 aa24.36■■□□□ 1.49
SPNS2-203ENST00000570979 PLEKHG2Q9H7P9 1386 aa24.36■■□□□ 1.49
SPNS2-203ENST00000570979 HMMRO75330 724 aa24.36■■□□□ 1.49
SPNS2-203ENST00000570979 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
SPNS2-203ENST00000570979 IL17REQ8NFR9 667 aa24.35■■□□□ 1.49
SPNS2-203ENST00000570979 ASAP1Q9ULH1 1129 aa24.35■■□□□ 1.49
SPNS2-203ENST00000570979 CEMIPQ8WUJ3 1361 aa24.34■■□□□ 1.49
SPNS2-203ENST00000570979 RTL5Q5HYW3 569 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-203ENST00000570979 ANKRD45Q5TZF3 282 aa24.34■■□□□ 1.49
SPNS2-203ENST00000570979 ANKRD44Q8N8A2 993 aa24.34■■□□□ 1.49
SPNS2-203ENST00000570979 SMARCC1Q92922 1105 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-203ENST00000570979 TMOD3Q9NYL9 352 aa24.34■■□□□ 1.49
SPNS2-203ENST00000570979 BMP2KLQ5H9B9 411 aa24.34■■□□□ 1.49
SPNS2-203ENST00000570979 ZNF530Q6P9A1 599 aaPredicted RBP24.34■■□□□ 1.49
SPNS2-203ENST00000570979 DCTPP1Q9H773 170 aa24.33■■□□□ 1.49
SPNS2-203ENST00000570979 KRT24Q2M2I5 525 aa24.32■■□□□ 1.48
SPNS2-203ENST00000570979 KDM6AO15550 1401 aaPredicted RBP24.32■■□□□ 1.48
SPNS2-203ENST00000570979 COL23A1Q86Y22 540 aaPredicted RBP24.31■■□□□ 1.48
SPNS2-203ENST00000570979 TBC1D32Q96NH3 1257 aa24.31■■□□□ 1.48
SPNS2-203ENST00000570979 MIS18AQ9NYP9 233 aa24.31■■□□□ 1.48
SPNS2-203ENST00000570979 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
SPNS2-203ENST00000570979 SLC16A10Q8TF71 515 aa24.31■■□□□ 1.48
SPNS2-203ENST00000570979 FHDC1Q9C0D6 1143 aaPredicted RBP24.31■■□□□ 1.48
SPNS2-203ENST00000570979 GNAI3P08754 354 aa24.3■■□□□ 1.48
SPNS2-203ENST00000570979 AMIGO3Q86WK7 504 aa24.3■■□□□ 1.48
SPNS2-203ENST00000570979 LNPKQ9C0E8 428 aa24.3■■□□□ 1.48
SPNS2-203ENST00000570979 ATG3Q9NT62 314 aa24.3■■□□□ 1.48
SPNS2-203ENST00000570979 LOC102724428A0A0B4J2F2 783 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 SIK1P57059 783 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 ARXQ96QS3 562 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 COL24A1Q17RW2 1714 aa24.29■■□□□ 1.48
SPNS2-203ENST00000570979 TEFQ10587 303 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms