RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 GPR153Q6NV75 609 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 PARP9Q8IXQ6 854 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 KCNB2Q92953 911 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 CHMP4BQ9H444 224 aaKnown RBP4.5□□□□□ -1.69
SMG6-208ENST00000570874 VRTNQ9H8Y1 702 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 PCDHB8Q9UN66 801 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 FAN1Q9Y2M0 1017 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 LTN1O94822 1766 aa4.5□□□□□ -1.69
SMG6-208ENST00000570874 MED14O60244 1454 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 CD163L1Q9NR16 1453 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 MINK1Q8N4C8 1332 aaPredicted RBP4.49□□□□□ -1.69
SMG6-208ENST00000570874 ADGRB2O60241 1585 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 TLDC2A0PJX2 215 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 G3V3G9 751 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 LCE2BO14633 110 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 KIF4AO95239 1232 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 HSP90AA1P07900 732 aaKnown RBP4.49□□□□□ -1.69
SMG6-208ENST00000570874 LTKP29376 864 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 NUBP1P53384 320 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 HNRNPUQ00839 825 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMG6-208ENST00000570874 AMHR2Q16671 573 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 DCAF8Q5TAQ9 597 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 DPY19L2Q6NUT2 758 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 DNAJC14Q6Y2X3 702 aaPredicted RBP4.49□□□□□ -1.69
SMG6-208ENST00000570874 WAPLQ7Z5K2 1190 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 GIPC2Q8TF65 315 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 VTI1AQ96AJ9 217 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 FAM212AQ96EL1 285 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 PRAM1Q96QH2 718 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 SENP7Q9BQF6 1050 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 CARD14Q9BXL6 1004 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 SLC12A5Q9H2X9 1139 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 CABP2Q9NPB3 220 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 CHPF2Q9P2E5 772 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 BOLA1Q9Y3E2 137 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 NUB1Q9Y5A7 615 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 STRCQ7RTU9 1775 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 KTN1Q86UP2 1357 aaKnown RBP4.49□□□□□ -1.69
SMG6-208ENST00000570874 TMEM2Q9UHN6 1383 aa4.49□□□□□ -1.69
SMG6-208ENST00000570874 DIP2AQ14689 1571 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 NSD3Q9BZ95 1437 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 WDHD1O75717 1129 aaPredicted RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 PBX2P40425 430 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 MMP14P50281 582 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 IFFO2Q5TF58 517 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 EGFLAMQ63HQ2 1017 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 B4GALNT3Q6L9W6 998 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 ILDR1Q86SU0 546 aaPredicted RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 ZCRB1Q8TBF4 217 aaKnown RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 BRINP2Q9C0B6 783 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 GNL3LQ9NVN8 582 aaKnown RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 CUEDC1Q9NWM3 386 aaPredicted RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 WWC3Q9ULE0 1092 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 LRPPRCP42704 1394 aaKnown RBP4.48□□□□□ -1.69
SMG6-208ENST00000570874 CDC42BPGQ6DT37 1551 aa4.48□□□□□ -1.69
SMG6-208ENST00000570874 PEAK1Q9H792 1746 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 CARNS1A5YM72 827 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 EPB41L2O43491 1005 aaKnown RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 SSFA2P28290 1259 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 COPB2P35606 906 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 PDAP1Q13442 181 aaKnown RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 SH3D19Q5HYK7 790 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 SDE2Q6IQ49 451 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 ZNF280DQ6N043 979 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 CCDC146Q8IYE0 955 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 CEP120Q8N960 986 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 TMC1Q8TDI8 760 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 GLMNQ92990 594 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 TRIM44Q96DX7 344 aaPredicted RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 SCYL1Q96KG9 808 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 TBC1D2Q9BYX2 928 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 BSDC1Q9NW68 430 aaPredicted RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 SWAP70Q9UH65 585 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 NOP58Q9Y2X3 529 aaKnown RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 A0A1W2PP64 1363 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 BRD4O60885 1362 aaPredicted RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 ROBO2Q9HCK4 1378 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 PLEKHG1Q9ULL1 1385 aa4.47□□□□□ -1.69
SMG6-208ENST00000570874 NKTRP30414 1462 aaKnown RBP4.47□□□□□ -1.69
SMG6-208ENST00000570874 NCKAP5LQ9HCH0 1330 aa4.46□□□□□ -1.69
SMG6-208ENST00000570874 TECPR2O15040 1411 aa4.46□□□□□ -1.69
SMG6-208ENST00000570874 PIK3C2AO00443 1686 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 ATP7BP35670 1465 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.46□□□□□ -1.7
SMG6-208ENST00000570874 GOLIM4O00461 696 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 ZNF500O60304 480 aaPredicted RBP4.46□□□□□ -1.7
SMG6-208ENST00000570874 PPP2R1AP30153 589 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 SETDB1Q15047 1291 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 NBPF20Q3BBV1 942 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 POTEEQ6S8J3 1075 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 ANP32BQ92688 251 aaKnown RBP4.46□□□□□ -1.7
SMG6-208ENST00000570874 SPACA7Q96KW9 195 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 SLC26A8Q96RN1 970 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 TSPAN18Q96SJ8 248 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 LNPKQ9C0E8 428 aa4.46□□□□□ -1.7
SMG6-208ENST00000570874 POGKQ9P215 609 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms