RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
CHD3-212ENST00000570758 THUMPD2Q9BTF0 503 aaKnown RBP7.19□□□□□ -1.26
CHD3-212ENST00000570758 BCL2L12Q9HB09 334 aa7.19□□□□□ -1.26
CHD3-212ENST00000570758 MYBBP1AQ9BQG0 1328 aaKnown RBP7.19□□□□□ -1.26
CHD3-212ENST00000570758 COL15A1P39059 1388 aa7.19□□□□□ -1.26
CHD3-212ENST00000570758 C10orf71Q711Q0 1435 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 PXDNLA1KZ92 1463 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 STARD3NLO95772 234 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 A1BGP04217 495 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 TM4SF1P30408 202 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 EIF5P55010 431 aaKnown RBP7.18□□□□□ -1.26
CHD3-212ENST00000570758 MIS18AQ9NYP9 233 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 NARFQ9UHQ1 456 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 USP16Q9Y5T5 823 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 PARP3Q9Y6F1 533 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 KIAA1551Q9HCM1 1747 aa7.18□□□□□ -1.26
CHD3-212ENST00000570758 KIF13BQ9NQT8 1826 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 DLG5Q8TDM6 1919 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 A0A0G2JLW4 131 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 POLRMTO00411 1230 aaKnown RBP7.17□□□□□ -1.26
CHD3-212ENST00000570758 GRIN3BO60391 1043 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 ZPR1O75312 459 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 DPEP1P16444 411 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
CHD3-212ENST00000570758 NFIXQ14938 502 aa7.17□□□□□ -1.26
CHD3-212ENST00000570758 TAF7Q15545 349 aaPredicted RBP7.17□□□□□ -1.26
CHD3-212ENST00000570758 TEX13AQ9BXU3 409 aaPredicted RBP7.17□□□□□ -1.26
CHD3-212ENST00000570758 NEFMP07197 916 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 SNRPA1P09661 255 aaKnown RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 IL6STP40189 918 aaPredicted RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 TGFB2P61812 414 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 CCDC146Q8IYE0 955 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 ZNF784Q8NCA9 323 aaPredicted RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 PNNQ9H307 717 aaKnown RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 PRKRIP1Q9H875 184 aaPredicted RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 TBC1D2BQ9UPU7 963 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 ZNF330Q9Y3S2 320 aaPredicted RBP7.16□□□□□ -1.26
CHD3-212ENST00000570758 CHD4Q14839 1912 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
CHD3-212ENST00000570758 N4BP2Q86UW6 1770 aaPredicted RBP7.15□□□□□ -1.26
CHD3-212ENST00000570758 A0A087WZG4 1122 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 CAMTA2O94983 1202 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 SERPINB2P05120 415 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 KCNA3P22001 575 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 CHRNA5P30532 468 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 TMPOP42166 694 aaKnown RBP7.15□□□□□ -1.26
CHD3-212ENST00000570758 TBC1D9BQ66K14 1250 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
CHD3-212ENST00000570758 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
CHD3-212ENST00000570758 RRP7AQ9Y3A4 280 aaKnown RBP7.15□□□□□ -1.26
CHD3-212ENST00000570758 RIPK4P57078 832 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 EIF4A1P60842 406 aaKnown RBP7.14□□□□□ -1.27
CHD3-212ENST00000570758 SCN7AQ01118 1682 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 BICDL1Q6ZP65 573 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 KDM3BQ7LBC6 1761 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 DZIP3Q86Y13 1208 aaKnown RBP7.14□□□□□ -1.27
CHD3-212ENST00000570758 CARMIL3Q8ND23 1372 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 PNISRQ8TF01 805 aaKnown RBP7.14□□□□□ -1.27
CHD3-212ENST00000570758 NRXN2Q9P2S2 1712 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 ADAMTS8Q9UP79 889 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 BCS1LQ9Y276 419 aa7.14□□□□□ -1.27
CHD3-212ENST00000570758 AFDNP55196 1824 aaKnown RBP7.13□□□□□ -1.27
CHD3-212ENST00000570758 GIGYF1O75420 1035 aaPredicted RBP7.13□□□□□ -1.27
CHD3-212ENST00000570758 WDR43Q15061 677 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHD3-212ENST00000570758 CCDC184Q52MB2 194 aa7.13□□□□□ -1.27
CHD3-212ENST00000570758 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
CHD3-212ENST00000570758 TRIM35Q9UPQ4 493 aa7.13□□□□□ -1.27
CHD3-212ENST00000570758 BRCA1P38398 1863 aaKnown RBP7.13□□□□□ -1.27
CHD3-212ENST00000570758 ADCY9O60503 1353 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 ZNF316A6NFI3 1004 aaPredicted RBP7.12□□□□□ -1.27
CHD3-212ENST00000570758 NEUROD2Q15784 382 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 ARHGAP27Q6ZUM4 889 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 CCDC24Q8N4L8 307 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 PIM2Q9P1W9 311 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 TSPYL4Q9UJ04 414 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 LAMB4A4D0S4 1761 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 BCORQ6W2J9 1755 aa7.12□□□□□ -1.27
CHD3-212ENST00000570758 ATP10DQ9P241 1426 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 LMOD3Q0VAK6 560 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 HLFQ16534 295 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 KRT24Q2M2I5 525 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 DALRD3Q5D0E6 543 aaKnown RBP7.11□□□□□ -1.27
CHD3-212ENST00000570758 PRR5LQ6MZQ0 368 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 NPM2Q86SE8 214 aaKnown RBP7.11□□□□□ -1.27
CHD3-212ENST00000570758 C2CD5Q86YS7 1000 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 NGEFQ8N5V2 710 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 ANKRD31Q8N7Z5 1873 aa7.11□□□□□ -1.27
CHD3-212ENST00000570758 CHL1O00533 1208 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 MYL6BP14649 208 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 PDIA6Q15084 440 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 CLEC4GQ6UXB4 293 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 TTLL7Q6ZT98 887 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 LRP10Q7Z4F1 713 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 SETDB2Q96T68 719 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 BRIP1Q9BX63 1249 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 BABAM1Q9NWV8 329 aa7.1□□□□□ -1.27
CHD3-212ENST00000570758 MAP3K15Q6ZN16 1313 aa7.09□□□□□ -1.27
CHD3-212ENST00000570758 ARFGEF1Q9Y6D6 1849 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms