RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 INSRP06213 1382 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 FYB1O15117 783 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 GPR162Q16538 588 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 NBPF6Q5VWK0 638 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 PLPP6Q8IY26 295 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 NBPF4Q96M43 638 aa9.02□□□□□ -0.97
SMG6-204ENST00000570606 COLQQ9Y215 455 aaPredicted RBP9.02□□□□□ -0.97
SMG6-204ENST00000570606 MAP2P11137 1827 aaKnown RBP9.02□□□□□ -0.97
SMG6-204ENST00000570606 KIF24Q5T7B8 1368 aa9.01□□□□□ -0.97
SMG6-204ENST00000570606 SPDYE16A6NNV3 312 aaPredicted RBP9.01□□□□□ -0.97
SMG6-204ENST00000570606 G3V3G9 751 aa9.01□□□□□ -0.97
SMG6-204ENST00000570606 ZMYND10O75800 440 aa9.01□□□□□ -0.97
SMG6-204ENST00000570606 TRIM26Q12899 539 aaPredicted RBP9.01□□□□□ -0.97
SMG6-204ENST00000570606 TMEM92Q6UXU6 159 aa9.01□□□□□ -0.97
SMG6-204ENST00000570606 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
SMG6-204ENST00000570606 L3MBTL3Q96JM7 780 aaPredicted RBP9.01□□□□□ -0.97
SMG6-204ENST00000570606 GOLGB1Q14789 3259 aaKnown RBP9.01□□□□□ -0.97
SMG6-204ENST00000570606 HSP90AB2PQ58FF8 381 aa9□□□□□ -0.97
SMG6-204ENST00000570606 DCBLD2Q96PD2 775 aa9□□□□□ -0.97
SMG6-204ENST00000570606 C4BP0C0L5 1744 aa9□□□□□ -0.97
SMG6-204ENST00000570606 PALLDQ8WX93 1383 aa8.99□□□□□ -0.97
SMG6-204ENST00000570606 POTEFA5A3E0 1075 aa8.99□□□□□ -0.97
SMG6-204ENST00000570606 PPM1GO15355 546 aaPredicted RBP8.99□□□□□ -0.97
SMG6-204ENST00000570606 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
SMG6-204ENST00000570606 MSL1Q68DK7 614 aa8.99□□□□□ -0.97
SMG6-204ENST00000570606 EMILIN1Q9Y6C2 1016 aa8.99□□□□□ -0.97
SMG6-204ENST00000570606 UBR3Q6ZT12 1888 aa8.99□□□□□ -0.97
SMG6-204ENST00000570606 MPRIPQ6WCQ1 1025 aa8.98□□□□□ -0.97
SMG6-204ENST00000570606 NLGN2Q8NFZ4 835 aa8.98□□□□□ -0.97
SMG6-204ENST00000570606 POLR3GLQ9BT43 218 aa8.98□□□□□ -0.97
SMG6-204ENST00000570606 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
SMG6-204ENST00000570606 NCAPD2Q15021 1401 aa8.97□□□□□ -0.97
SMG6-204ENST00000570606 CYP27B1O15528 508 aa8.97□□□□□ -0.97
SMG6-204ENST00000570606 SEC24BO95487 1268 aa8.97□□□□□ -0.97
SMG6-204ENST00000570606 HMGB2P26583 209 aaKnown RBP8.97□□□□□ -0.97
SMG6-204ENST00000570606 SLC39A7Q92504 469 aa8.97□□□□□ -0.97
SMG6-204ENST00000570606 AK7Q96M32 723 aa8.97□□□□□ -0.97
SMG6-204ENST00000570606 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.98
SMG6-204ENST00000570606 COL23A1Q86Y22 540 aaPredicted RBP8.96□□□□□ -0.98
SMG6-204ENST00000570606 SMARCC1Q92922 1105 aaPredicted RBP8.96□□□□□ -0.98
SMG6-204ENST00000570606 CARD14Q9BXL6 1004 aa8.96□□□□□ -0.98
SMG6-204ENST00000570606 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
SMG6-204ENST00000570606 PHF14O94880 888 aa8.95□□□□□ -0.98
SMG6-204ENST00000570606 TMEM132AQ24JP5 1023 aa8.95□□□□□ -0.98
SMG6-204ENST00000570606 FLAD1Q8NFF5 587 aa8.95□□□□□ -0.98
SMG6-204ENST00000570606 SENP3-EIF4A1A0A087X0R7 540 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
SMG6-204ENST00000570606 POTEIP0CG38 1075 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 C7P10643 843 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 GPIHBP1Q8IV16 184 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 TMOD3Q9NYL9 352 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 WASHC2AQ641Q2 1341 aa8.94□□□□□ -0.98
SMG6-204ENST00000570606 GRIN3BO60391 1043 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 YBX3P16989 372 aaKnown RBP eCLIP8.93□□□□□ -0.98
SMG6-204ENST00000570606 TNNT2P45379 298 aaPredicted RBP8.93□□□□□ -0.98
SMG6-204ENST00000570606 OXER1Q8TDS5 423 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 PIGBQ92521 554 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 EYA1Q99502 592 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 PCGF6Q9BYE7 350 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
SMG6-204ENST00000570606 CLSPNQ9HAW4 1339 aa8.92□□□□□ -0.98
SMG6-204ENST00000570606 LOC102724428A0A0B4J2F2 783 aa8.92□□□□□ -0.98
SMG6-204ENST00000570606 SIK1P57059 783 aa8.92□□□□□ -0.98
SMG6-204ENST00000570606 C1QTNF8P60827 252 aa8.92□□□□□ -0.98
SMG6-204ENST00000570606 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
SMG6-204ENST00000570606 COL5A3P25940 1745 aaPredicted RBP8.91□□□□□ -0.98
SMG6-204ENST00000570606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.91□□□□□ -0.98
SMG6-204ENST00000570606 GNPATO15228 680 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 PHKG2P15735 406 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 SSFA2P28290 1259 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 EIF4A2Q14240 407 aaKnown RBP8.91□□□□□ -0.98
SMG6-204ENST00000570606 IFNL2Q8IZJ0 200 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 LINC00116Q8NCU8 138 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 POLKQ9UBT6 870 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 CD2APQ9Y5K6 639 aa8.91□□□□□ -0.98
SMG6-204ENST00000570606 ATP10DQ9P241 1426 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 IGSF1Q8N6C5 1336 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 ATP6V1AP38606 617 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 SMIM5Q71RC9 77 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 AMIGO3Q86WK7 504 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 ASAP1Q9ULH1 1129 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 C4AP0C0L4 1744 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 ZNF831Q5JPB2 1677 aa8.9□□□□□ -0.98
SMG6-204ENST00000570606 KIF13BQ9NQT8 1826 aa8.89□□□□□ -0.99
SMG6-204ENST00000570606 GPR37O15354 613 aa8.89□□□□□ -0.99
SMG6-204ENST00000570606 HSP90AB1P08238 724 aaKnown RBP8.89□□□□□ -0.99
SMG6-204ENST00000570606 HSPA5P11021 654 aaKnown RBP8.89□□□□□ -0.99
SMG6-204ENST00000570606 EIF4G2P78344 907 aaKnown RBP eCLIP8.89□□□□□ -0.99
SMG6-204ENST00000570606 WWC3Q9ULE0 1092 aa8.89□□□□□ -0.99
SMG6-204ENST00000570606 CICQ96RK0 1608 aaPredicted RBP8.89□□□□□ -0.99
SMG6-204ENST00000570606 VIRMAQ69YN4 1812 aaKnown RBP8.89□□□□□ -0.99
SMG6-204ENST00000570606 N4BP2Q86UW6 1770 aaPredicted RBP8.89□□□□□ -0.99
SMG6-204ENST00000570606 KDRP35968 1356 aa8.88□□□□□ -0.99
SMG6-204ENST00000570606 ITPK1Q13572 414 aa8.88□□□□□ -0.99
SMG6-204ENST00000570606 ZNF530Q6P9A1 599 aaPredicted RBP8.88□□□□□ -0.99
SMG6-204ENST00000570606 MYH14Q7Z406 1995 aaKnown RBP8.88□□□□□ -0.99
SMG6-204ENST00000570606 SCN11AQ9UI33 1791 aa8.87□□□□□ -0.99
SMG6-204ENST00000570606 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms