RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 NLRP2Q9NX02 1062 aa12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 KDM3BQ7LBC6 1761 aa12.55□□□□□ -0.4
RBFOX1-220ENST00000570188 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 CRB1P82279 1406 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 PIP4K2BP78356 416 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 DDX12PQ92771 950 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 NRAPQ86VF7 1730 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 SHANK3Q9BYB0 1731 aa12.54□□□□□ -0.4
RBFOX1-220ENST00000570188 MEGF6O75095 1541 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 UBAP1LF5GYI3 381 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 PLIN1O60240 522 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 GABBR2O75899 941 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 SEC24BO95487 1268 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 PTGER2P43116 358 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 PLEKHO1Q53GL0 409 aaPredicted RBP12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
RBFOX1-220ENST00000570188 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 BCAR3O75815 825 aa12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 MAP2K5Q13163 448 aa12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 ZNF530Q6P9A1 599 aaPredicted RBP12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 WDR17Q8IZU2 1322 aa12.52□□□□□ -0.41
RBFOX1-220ENST00000570188 RAPGEF4Q8WZA2 1011 aa12.51□□□□□ -0.41
RBFOX1-220ENST00000570188 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
RBFOX1-220ENST00000570188 PLEKHG2Q9H7P9 1386 aa12.51□□□□□ -0.41
RBFOX1-220ENST00000570188 TATP17735 454 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 AKAP4Q5JQC9 854 aa12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
RBFOX1-220ENST00000570188 GNPATO15228 680 aa12.49□□□□□ -0.41
RBFOX1-220ENST00000570188 C1orf141Q5JVX7 400 aa12.49□□□□□ -0.41
RBFOX1-220ENST00000570188 TOM1L2Q6ZVM7 507 aa12.49□□□□□ -0.41
RBFOX1-220ENST00000570188 CEMIPQ8WUJ3 1361 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 POTEFA5A3E0 1075 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 CHL1O00533 1208 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 EVI5O60447 810 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 EXOC6Q8TAG9 804 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 CERKQ8TCT0 537 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 CRBNQ96SW2 442 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 BCL2L13Q9BXK5 485 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 SMC4Q9NTJ3 1288 aa12.48□□□□□ -0.41
RBFOX1-220ENST00000570188 IRF6O14896 467 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 TBC1D12O60347 775 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 FECHP22830 423 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 EVA1CP58658 441 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 HIC1Q14526 733 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 C20orf194Q5TEA3 1177 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 IL17REQ8NFR9 667 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 FRAT1Q92837 279 aaPredicted RBP12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 ZNF428Q96B54 188 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 TSPYL4Q9UJ04 414 aa12.47□□□□□ -0.41
RBFOX1-220ENST00000570188 TWISTNBQ3B726 338 aaPredicted RBP12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 ALDH1L2Q3SY69 923 aa12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 SSH1Q8WYL5 1049 aa12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 DCBLD2Q96PD2 775 aa12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 BTG4Q9NY30 223 aa12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 SPG7Q9UQ90 795 aa12.46□□□□□ -0.41
RBFOX1-220ENST00000570188 ELL2O00472 640 aaPredicted RBP12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 VAMP4O75379 141 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 LARP1Q6PKG0 1096 aaKnown RBP12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 TSPYL6Q8N831 410 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 C8orf58Q8NAV2 365 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 SLC39A7Q92504 469 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 MRC1P22897 1456 aa12.45□□□□□ -0.42
RBFOX1-220ENST00000570188 KIF16BQ96L93 1317 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 RNMTO43148 476 aaKnown RBP12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 TEFQ10587 303 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 AMHR2Q16671 573 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 LGR6Q9HBX8 967 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 TOGARAM1Q9Y4F4 1720 aa12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 KDM6AO15550 1401 aaPredicted RBP12.44□□□□□ -0.42
RBFOX1-220ENST00000570188 JCADQ9P266 1359 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 C5P01031 1676 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 ADAMTS2O95450 1211 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 PHKG2P15735 406 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 ZKSCAN2Q63HK3 967 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 B4GALNT3Q6L9W6 998 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 PARP9Q8IXQ6 854 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
RBFOX1-220ENST00000570188 IL2RBP14784 551 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms