RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 FCF1Q9Y324 198 aaKnown RBP9.27□□□□□ -0.93
UBFD1-209ENST00000569919 ERBINQ96RT1 1412 aa9.27□□□□□ -0.93
UBFD1-209ENST00000569919 NWD1Q149M9 1564 aa9.27□□□□□ -0.93
UBFD1-209ENST00000569919 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
UBFD1-209ENST00000569919 KCNC4Q03721 635 aa9.26□□□□□ -0.93
UBFD1-209ENST00000569919 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
UBFD1-209ENST00000569919 RNF166Q96A37 237 aaPredicted RBP9.26□□□□□ -0.93
UBFD1-209ENST00000569919 LMOD1P29536 600 aaPredicted RBP9.25□□□□□ -0.93
UBFD1-209ENST00000569919 CCDC125Q86Z20 511 aa9.25□□□□□ -0.93
UBFD1-209ENST00000569919 SPNS2Q8IVW8 549 aa9.25□□□□□ -0.93
UBFD1-209ENST00000569919 ARHGAP9Q9BRR9 750 aa9.25□□□□□ -0.93
UBFD1-209ENST00000569919 CHD2O14647 1828 aaKnown RBP9.24□□□□□ -0.93
UBFD1-209ENST00000569919 AHDC1Q5TGY3 1603 aaPredicted RBP9.24□□□□□ -0.93
UBFD1-209ENST00000569919 NOS1P29475 1434 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 SHPRHQ149N8 1683 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 PDIA4P13667 645 aaKnown RBP9.24□□□□□ -0.93
UBFD1-209ENST00000569919 TBC1D9Q6ZT07 1266 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 BAP1Q92560 729 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 PBXIP1Q96AQ6 731 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 C8orf37Q96NL8 207 aa9.24□□□□□ -0.93
UBFD1-209ENST00000569919 LMTK2Q8IWU2 1503 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-209ENST00000569919 PPEF1O14829 653 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-209ENST00000569919 ITGBL1O95965 494 aaPredicted RBP9.23□□□□□ -0.93
UBFD1-209ENST00000569919 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 ADAM32Q8TC27 787 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 AMOTL2Q9Y2J4 779 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 PCDHB9Q9Y5E1 797 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 ACIN1Q9UKV3 1341 aaKnown RBP9.23□□□□□ -0.93
UBFD1-209ENST00000569919 ATAD2Q6PL18 1390 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 PIK3R4Q99570 1358 aa9.23□□□□□ -0.93
UBFD1-209ENST00000569919 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
UBFD1-209ENST00000569919 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
UBFD1-209ENST00000569919 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
UBFD1-209ENST00000569919 ZBTB33Q86T24 672 aa9.22□□□□□ -0.93
UBFD1-209ENST00000569919 MAFBQ9Y5Q3 323 aaPredicted RBP9.22□□□□□ -0.93
UBFD1-209ENST00000569919 SETD5Q9C0A6 1442 aa9.22□□□□□ -0.93
UBFD1-209ENST00000569919 ATP9BO43861 1147 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 MCCD1P59942 119 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-209ENST00000569919 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 KANK4Q5T7N3 995 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-209ENST00000569919 RETREG2Q8NC44 543 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 CEP126Q9P2H0 1117 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 CHIC2Q9UKJ5 165 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.94
UBFD1-209ENST00000569919 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 ABCC5O15440 1437 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 ZFYVE9O95405 1425 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 ADGRB3O60242 1522 aa9.21□□□□□ -0.94
UBFD1-209ENST00000569919 MAGEB6P1A0A0J9YX57 407 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 AGERQ15109 404 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 SH3RF1Q7Z6J0 888 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 ZNF592Q92610 1267 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 CARD14Q9BXL6 1004 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 TRPC5Q9UL62 973 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-209ENST00000569919 RGS12O14924 1447 aa9.2□□□□□ -0.94
UBFD1-209ENST00000569919 RNF223E7ERA6 249 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 BPHLQ86WA6 291 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-209ENST00000569919 ZNF511Q8NB15 262 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 USP21Q9UK80 565 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 RPRD2Q5VT52 1461 aaKnown RBP9.19□□□□□ -0.94
UBFD1-209ENST00000569919 DIP2AQ14689 1571 aa9.19□□□□□ -0.94
UBFD1-209ENST00000569919 ADAMTS2O95450 1211 aa9.18□□□□□ -0.94
UBFD1-209ENST00000569919 SKIP12755 728 aa9.18□□□□□ -0.94
UBFD1-209ENST00000569919 DCCP43146 1447 aa9.18□□□□□ -0.94
UBFD1-209ENST00000569919 CDCA8Q53HL2 280 aa9.18□□□□□ -0.94
UBFD1-209ENST00000569919 DZIP3Q86Y13 1208 aaKnown RBP9.18□□□□□ -0.94
UBFD1-209ENST00000569919 FAM174AQ8TBP5 190 aa9.18□□□□□ -0.94
UBFD1-209ENST00000569919 ADAMTS13Q76LX8 1427 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 PNPLA6Q8IY17 1366 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 GGCXP38435 758 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 SH3BP2P78314 561 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 SLFNL1Q499Z3 407 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
UBFD1-209ENST00000569919 DAPK1P53355 1430 aa9.16□□□□□ -0.94
UBFD1-209ENST00000569919 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
UBFD1-209ENST00000569919 ERFEQ4G0M1 354 aa9.16□□□□□ -0.94
UBFD1-209ENST00000569919 PHTF2Q8N3S3 785 aa9.16□□□□□ -0.94
UBFD1-209ENST00000569919 ANKLE1Q8NAG6 615 aa9.16□□□□□ -0.94
UBFD1-209ENST00000569919 TRAIPQ9BWF2 469 aa9.16□□□□□ -0.94
UBFD1-209ENST00000569919 USP17L5A8MUK1 530 aa9.15□□□□□ -0.94
UBFD1-209ENST00000569919 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
UBFD1-209ENST00000569919 PLA2G2CQ5R387 149 aa9.15□□□□□ -0.94
UBFD1-209ENST00000569919 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
UBFD1-209ENST00000569919 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
UBFD1-209ENST00000569919 DDX17Q92841 729 aaKnown RBP9.15□□□□□ -0.94
UBFD1-209ENST00000569919 ASXL1Q8IXJ9 1541 aa9.15□□□□□ -0.95
UBFD1-209ENST00000569919 MST1RQ04912 1400 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 VPS8Q8N3P4 1428 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 TMEM131LA2VDJ0 1609 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 USP17L3A6NCW0 530 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 USP17L4A6NCW7 530 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 TRIM32Q13049 653 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 USP17L2Q6R6M4 530 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 USP17L1Q7RTZ2 530 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 DEPDC4Q8N2C3 294 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
UBFD1-209ENST00000569919 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms