RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 PCDHGA4Q9Y5G9 962 aa10.77□□□□□ -0.69
RAB11A-209ENST00000569896 U2AF1L5P0DN76 240 aaPredicted RBP10.76□□□□□ -0.69
RAB11A-209ENST00000569896 U2AF1Q01081 240 aaKnown RBP eCLIP10.76□□□□□ -0.69
RAB11A-209ENST00000569896 PLEKHO1Q53GL0 409 aaPredicted RBP10.76□□□□□ -0.69
RAB11A-209ENST00000569896 ITGB4P16144 1822 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 NCAPD2Q15021 1401 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 PCDH11XQ9BZA7 1347 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 PCDH11YQ9BZA8 1340 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 TRIM37O94972 964 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 DSG2Q14126 1118 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 DOT1LQ8TEK3 1739 aa10.75□□□□□ -0.69
RAB11A-209ENST00000569896 NUDT7P0C024 238 aa10.74□□□□□ -0.69
RAB11A-209ENST00000569896 AMOTQ4VCS5 1084 aa10.74□□□□□ -0.69
RAB11A-209ENST00000569896 CCDC125Q86Z20 511 aa10.74□□□□□ -0.69
RAB11A-209ENST00000569896 ACSBG1Q96GR2 724 aa10.74□□□□□ -0.69
RAB11A-209ENST00000569896 TNS1Q9HBL0 1735 aaKnown RBP10.73□□□□□ -0.69
RAB11A-209ENST00000569896 KDRP35968 1356 aa10.73□□□□□ -0.69
RAB11A-209ENST00000569896 DLG5Q8TDM6 1919 aa10.73□□□□□ -0.69
RAB11A-209ENST00000569896 NEFMP07197 916 aa10.73□□□□□ -0.69
RAB11A-209ENST00000569896 WDR43Q15061 677 aaKnown RBP eCLIP10.73□□□□□ -0.69
RAB11A-209ENST00000569896 C1orf141Q5JVX7 400 aa10.73□□□□□ -0.69
RAB11A-209ENST00000569896 ZNF530Q6P9A1 599 aaPredicted RBP10.73□□□□□ -0.69
RAB11A-209ENST00000569896 BBXQ8WY36 941 aaPredicted RBP10.73□□□□□ -0.69
RAB11A-209ENST00000569896 SYTL4Q96C24 671 aaPredicted RBP10.73□□□□□ -0.69
RAB11A-209ENST00000569896 BTAF1O14981 1849 aa10.73□□□□□ -0.69
RAB11A-209ENST00000569896 NHSQ6T4R5 1651 aa10.72□□□□□ -0.69
RAB11A-209ENST00000569896 PDE4AP27815 886 aa10.72□□□□□ -0.69
RAB11A-209ENST00000569896 PRKAR2BP31323 418 aa10.72□□□□□ -0.69
RAB11A-209ENST00000569896 IFNL2Q8IZJ0 200 aa10.72□□□□□ -0.69
RAB11A-209ENST00000569896 SCN11AQ9UI33 1791 aa10.72□□□□□ -0.69
RAB11A-209ENST00000569896 CYP27B1O15528 508 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 FCHSD2O94868 740 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 APBA3O96018 575 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 BAG6P46379 1132 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 KRTAP3-3Q9BYR6 98 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 KRTAP3-2Q9BYR7 98 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 CRISPLD2Q9H0B8 497 aa10.71□□□□□ -0.69
RAB11A-209ENST00000569896 PNNQ9H307 717 aaKnown RBP10.71□□□□□ -0.69
RAB11A-209ENST00000569896 PLEKHG2Q9H7P9 1386 aa10.7□□□□□ -0.7
RAB11A-209ENST00000569896 TBC1D12O60347 775 aa10.7□□□□□ -0.7
RAB11A-209ENST00000569896 PHKG2P15735 406 aa10.7□□□□□ -0.7
RAB11A-209ENST00000569896 ZNF687Q8N1G0 1237 aa10.7□□□□□ -0.7
RAB11A-209ENST00000569896 PTCD2Q8WV60 388 aaKnown RBP10.7□□□□□ -0.7
RAB11A-209ENST00000569896 RSPH6AQ9H0K4 717 aa10.7□□□□□ -0.7
RAB11A-209ENST00000569896 TOGARAM1Q9Y4F4 1720 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 KCNQ2O43526 872 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
RAB11A-209ENST00000569896 PRIM1P49642 420 aaKnown RBP10.69□□□□□ -0.7
RAB11A-209ENST00000569896 DIEXFQ68CQ4 756 aaKnown RBP10.69□□□□□ -0.7
RAB11A-209ENST00000569896 SPNS2Q8IVW8 549 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 MRS2Q9HD23 443 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 BCL9O00512 1426 aa10.69□□□□□ -0.7
RAB11A-209ENST00000569896 MTHFSDQ2M296 383 aaKnown RBP10.68□□□□□ -0.7
RAB11A-209ENST00000569896 MPRIPQ6WCQ1 1025 aa10.68□□□□□ -0.7
RAB11A-209ENST00000569896 DEFB132Q7Z7B7 95 aa10.68□□□□□ -0.7
RAB11A-209ENST00000569896 EN1Q05925 392 aaPredicted RBP10.67□□□□□ -0.7
RAB11A-209ENST00000569896 AKAP4Q5JQC9 854 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 PTF1AQ7RTS3 328 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 GAS2L2Q8NHY3 880 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 DCAF5Q96JK2 942 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 PHACTR3Q96KR7 559 aa10.67□□□□□ -0.7
RAB11A-209ENST00000569896 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.67□□□□□ -0.7
RAB11A-209ENST00000569896 CCDC184Q52MB2 194 aa10.66□□□□□ -0.7
RAB11A-209ENST00000569896 TMOD3Q9NYL9 352 aa10.66□□□□□ -0.7
RAB11A-209ENST00000569896 ADAMTS8Q9UP79 889 aa10.66□□□□□ -0.7
RAB11A-209ENST00000569896 LHX6Q9UPM6 363 aa10.66□□□□□ -0.7
RAB11A-209ENST00000569896 RGPD3A6NKT7 1758 aaPredicted RBP10.66□□□□□ -0.7
RAB11A-209ENST00000569896 RGPD4Q7Z3J3 1758 aa10.66□□□□□ -0.7
RAB11A-209ENST00000569896 GNAT3A8MTJ3 354 aa10.65□□□□□ -0.7
RAB11A-209ENST00000569896 CABP4P57796 275 aa10.65□□□□□ -0.7
RAB11A-209ENST00000569896 CCDC146Q8IYE0 955 aa10.65□□□□□ -0.7
RAB11A-209ENST00000569896 LARP6Q9BRS8 491 aaKnown RBP10.65□□□□□ -0.7
RAB11A-209ENST00000569896 ERVV-2B6SEH9 535 aa10.65□□□□□ -0.71
RAB11A-209ENST00000569896 EZH2Q15910 746 aaKnown RBP10.65□□□□□ -0.71
RAB11A-209ENST00000569896 RTF1Q92541 710 aaKnown RBP10.65□□□□□ -0.71
RAB11A-209ENST00000569896 LGR6Q9HBX8 967 aa10.65□□□□□ -0.71
RAB11A-209ENST00000569896 MAP3K5Q99683 1374 aa10.64□□□□□ -0.71
RAB11A-209ENST00000569896 LY75O60449 1722 aa10.64□□□□□ -0.71
RAB11A-209ENST00000569896 RREB1Q92766 1687 aa10.64□□□□□ -0.71
RAB11A-209ENST00000569896 KDM6AO15550 1401 aaPredicted RBP10.64□□□□□ -0.71
RAB11A-209ENST00000569896 PSDA5PKW4 1024 aaPredicted RBP10.64□□□□□ -0.71
RAB11A-209ENST00000569896 RNMTO43148 476 aaKnown RBP10.64□□□□□ -0.71
RAB11A-209ENST00000569896 NEUROD2Q15784 382 aa10.64□□□□□ -0.71
RAB11A-209ENST00000569896 RUNDC1Q96C34 613 aa10.64□□□□□ -0.71
RAB11A-209ENST00000569896 DDX27Q96GQ7 796 aaKnown RBP10.64□□□□□ -0.71
RAB11A-209ENST00000569896 PLSCR1O15162 318 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 TEFQ10587 303 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 MMRN1Q13201 1228 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 FAM9BQ8IZU0 186 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 NFATC2IPQ8NCF5 419 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 SPRYD3Q8NCJ5 442 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 PIGBQ92521 554 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 CAMKK2Q96RR4 588 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
RAB11A-209ENST00000569896 TAF1LQ8IZX4 1826 aa10.62□□□□□ -0.71
RAB11A-209ENST00000569896 SIPA1L3O60292 1781 aaPredicted RBP10.62□□□□□ -0.71
RAB11A-209ENST00000569896 NUP188Q5SRE5 1749 aa10.62□□□□□ -0.71
RAB11A-209ENST00000569896 RIPK4P57078 832 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms