RNA–Protein interactions for RNA: ENST00000569746.1

ITGAM-207, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-207ENST00000569746 CD2APQ9Y5K6 639 aa18.67■□□□□ 0.58
ITGAM-207ENST00000569746 USP42Q9H9J4 1324 aaKnown RBP18.67■□□□□ 0.58
ITGAM-207ENST00000569746 CHD4Q14839 1912 aa18.66■□□□□ 0.58
ITGAM-207ENST00000569746 LAMB4A4D0S4 1761 aa18.66■□□□□ 0.58
ITGAM-207ENST00000569746 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
ITGAM-207ENST00000569746 SRP68Q9UHB9 627 aaKnown RBP18.66■□□□□ 0.58
ITGAM-207ENST00000569746 UTRNP46939 3433 aa18.66■□□□□ 0.58
ITGAM-207ENST00000569746 SCN7AQ01118 1682 aa18.66■□□□□ 0.58
ITGAM-207ENST00000569746 GOLGB1Q14789 3259 aaKnown RBP18.65■□□□□ 0.58
ITGAM-207ENST00000569746 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
ITGAM-207ENST00000569746 TAF7Q15545 349 aaPredicted RBP18.65■□□□□ 0.58
ITGAM-207ENST00000569746 GPR162Q16538 588 aa18.65■□□□□ 0.58
ITGAM-207ENST00000569746 KCNQ3O43525 872 aa18.64■□□□□ 0.57
ITGAM-207ENST00000569746 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
ITGAM-207ENST00000569746 KIAA1551Q9HCM1 1747 aa18.63■□□□□ 0.57
ITGAM-207ENST00000569746 YY1P25490 414 aa18.63■□□□□ 0.57
ITGAM-207ENST00000569746 CANXP27824 592 aaKnown RBP18.63■□□□□ 0.57
ITGAM-207ENST00000569746 C10orf71Q711Q0 1435 aa18.63■□□□□ 0.57
ITGAM-207ENST00000569746 ZPR1O75312 459 aa18.62■□□□□ 0.57
ITGAM-207ENST00000569746 N4BP2Q86UW6 1770 aaPredicted RBP18.62■□□□□ 0.57
ITGAM-207ENST00000569746 FKBP8Q14318 412 aa18.61■□□□□ 0.57
ITGAM-207ENST00000569746 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
ITGAM-207ENST00000569746 PARP3Q9Y6F1 533 aa18.61■□□□□ 0.57
ITGAM-207ENST00000569746 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
ITGAM-207ENST00000569746 RIPK4P57078 832 aa18.6■□□□□ 0.57
ITGAM-207ENST00000569746 LMOD3Q0VAK6 560 aa18.6■□□□□ 0.57
ITGAM-207ENST00000569746 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
ITGAM-207ENST00000569746 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
ITGAM-207ENST00000569746 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
ITGAM-207ENST00000569746 PXDNLA1KZ92 1463 aa18.59■□□□□ 0.57
ITGAM-207ENST00000569746 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
ITGAM-207ENST00000569746 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
ITGAM-207ENST00000569746 NARFQ9UHQ1 456 aa18.59■□□□□ 0.57
ITGAM-207ENST00000569746 ADAMTS8Q9UP79 889 aa18.59■□□□□ 0.57
ITGAM-207ENST00000569746 A0A087WZG4 1122 aa18.58■□□□□ 0.56
ITGAM-207ENST00000569746 SNRPA1P09661 255 aaKnown RBP18.58■□□□□ 0.56
ITGAM-207ENST00000569746 YBX3P16989 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
ITGAM-207ENST00000569746 TMPOP42166 694 aaKnown RBP18.58■□□□□ 0.56
ITGAM-207ENST00000569746 NPM2Q86SE8 214 aaKnown RBP18.58■□□□□ 0.56
ITGAM-207ENST00000569746 PRAMEF22A3QJZ6 481 aa18.57■□□□□ 0.56
ITGAM-207ENST00000569746 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
ITGAM-207ENST00000569746 DDR1Q08345 913 aa18.57■□□□□ 0.56
ITGAM-207ENST00000569746 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
ITGAM-207ENST00000569746 WWC3Q9ULE0 1092 aa18.57■□□□□ 0.56
ITGAM-207ENST00000569746 BRCA1P38398 1863 aaKnown RBP18.56■□□□□ 0.56
ITGAM-207ENST00000569746 ANP32CO43423 234 aa18.56■□□□□ 0.56
ITGAM-207ENST00000569746 A1BGP04217 495 aa18.56■□□□□ 0.56
ITGAM-207ENST00000569746 IL6STP40189 918 aaPredicted RBP18.56■□□□□ 0.56
ITGAM-207ENST00000569746 BABAM1Q9NWV8 329 aa18.56■□□□□ 0.56
ITGAM-207ENST00000569746 NRXN2Q9P2S2 1712 aa18.56■□□□□ 0.56
ITGAM-207ENST00000569746 RRP7AQ9Y3A4 280 aaKnown RBP18.55■□□□□ 0.56
ITGAM-207ENST00000569746 USP16Q9Y5T5 823 aa18.55■□□□□ 0.56
ITGAM-207ENST00000569746 POLRMTO00411 1230 aaKnown RBP18.54■□□□□ 0.56
ITGAM-207ENST00000569746 GRIN3BO60391 1043 aa18.54■□□□□ 0.56
ITGAM-207ENST00000569746 PIP4K2AP48426 406 aaPredicted RBP18.54■□□□□ 0.56
ITGAM-207ENST00000569746 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
ITGAM-207ENST00000569746 NFIXQ14938 502 aa18.53■□□□□ 0.56
ITGAM-207ENST00000569746 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
ITGAM-207ENST00000569746 TM4SF1P30408 202 aa18.52■□□□□ 0.56
ITGAM-207ENST00000569746 TGFB2P61812 414 aa18.52■□□□□ 0.56
ITGAM-207ENST00000569746 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
ITGAM-207ENST00000569746 TBC1D2BQ9UPU7 963 aa18.52■□□□□ 0.56
ITGAM-207ENST00000569746 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
ITGAM-207ENST00000569746 A0A0G2JLW4 131 aa18.5■□□□□ 0.55
ITGAM-207ENST00000569746 EIF4A1P60842 406 aaKnown RBP18.5■□□□□ 0.55
ITGAM-207ENST00000569746 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
ITGAM-207ENST00000569746 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
ITGAM-207ENST00000569746 ARFGEF1Q9Y6D6 1849 aa18.5■□□□□ 0.55
ITGAM-207ENST00000569746 DPEP1P16444 411 aa18.49■□□□□ 0.55
ITGAM-207ENST00000569746 CARMIL3Q8ND23 1372 aa18.48■□□□□ 0.55
ITGAM-207ENST00000569746 GIGYF1O75420 1035 aaPredicted RBP18.48■□□□□ 0.55
ITGAM-207ENST00000569746 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
ITGAM-207ENST00000569746 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
ITGAM-207ENST00000569746 ANKRD31Q8N7Z5 1873 aa18.48■□□□□ 0.55
ITGAM-207ENST00000569746 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
ITGAM-207ENST00000569746 SERPINB2P05120 415 aa18.47■□□□□ 0.55
ITGAM-207ENST00000569746 NBPF10Q6P3W6 841 aaKnown RBP18.47■□□□□ 0.55
ITGAM-207ENST00000569746 NBPF15Q8N660 670 aa18.47■□□□□ 0.55
ITGAM-207ENST00000569746 TRIM35Q9UPQ4 493 aa18.47■□□□□ 0.55
ITGAM-207ENST00000569746 BCS1LQ9Y276 419 aa18.47■□□□□ 0.55
ITGAM-207ENST00000569746 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
ITGAM-207ENST00000569746 RGL2O15211 777 aa18.45■□□□□ 0.54
ITGAM-207ENST00000569746 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
ITGAM-207ENST00000569746 CLEC4GQ6UXB4 293 aa18.45■□□□□ 0.54
ITGAM-207ENST00000569746 ZNF652Q9Y2D9 606 aa18.45■□□□□ 0.54
ITGAM-207ENST00000569746 CHL1O00533 1208 aa18.44■□□□□ 0.54
ITGAM-207ENST00000569746 APAF1O14727 1248 aa18.44■□□□□ 0.54
ITGAM-207ENST00000569746 CHRNA5P30532 468 aa18.44■□□□□ 0.54
ITGAM-207ENST00000569746 CCDC184Q52MB2 194 aa18.44■□□□□ 0.54
ITGAM-207ENST00000569746 ZNF784Q8NCA9 323 aaPredicted RBP18.44■□□□□ 0.54
ITGAM-207ENST00000569746 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
ITGAM-207ENST00000569746 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
ITGAM-207ENST00000569746 SETDB2Q96T68 719 aa18.43■□□□□ 0.54
ITGAM-207ENST00000569746 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
ITGAM-207ENST00000569746 NUP98P52948 1817 aa18.43■□□□□ 0.54
ITGAM-207ENST00000569746 NPHP1O15259 732 aa18.42■□□□□ 0.54
ITGAM-207ENST00000569746 KCNA3P22001 575 aa18.42■□□□□ 0.54
ITGAM-207ENST00000569746 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
ITGAM-207ENST00000569746 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
ITGAM-207ENST00000569746 ERBB4Q15303 1308 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms