RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 DDR1Q08345 913 aa17.63■□□□□ 0.41
SPG7-221ENST00000569720 USPL1Q5W0Q7 1092 aa17.63■□□□□ 0.41
SPG7-221ENST00000569720 COL15A1P39059 1388 aa17.63■□□□□ 0.41
SPG7-221ENST00000569720 STARD3NLO95772 234 aa17.62■□□□□ 0.41
SPG7-221ENST00000569720 TM4SF1P30408 202 aa17.62■□□□□ 0.41
SPG7-221ENST00000569720 NARFQ9UHQ1 456 aa17.62■□□□□ 0.41
SPG7-221ENST00000569720 AFDNP55196 1824 aaKnown RBP17.61■□□□□ 0.41
SPG7-221ENST00000569720 POLRMTO00411 1230 aaKnown RBP17.61■□□□□ 0.41
SPG7-221ENST00000569720 KCNA3P22001 575 aa17.61■□□□□ 0.41
SPG7-221ENST00000569720 DALRD3Q5D0E6 543 aaKnown RBP17.61■□□□□ 0.41
SPG7-221ENST00000569720 ZBTB1Q9Y2K1 713 aa17.61■□□□□ 0.41
SPG7-221ENST00000569720 NUDCQ9Y266 331 aa17.6■□□□□ 0.41
SPG7-221ENST00000569720 SIPA1L3O60292 1781 aaPredicted RBP17.6■□□□□ 0.41
SPG7-221ENST00000569720 CANXP27824 592 aaKnown RBP17.59■□□□□ 0.41
SPG7-221ENST00000569720 TEX13AQ9BXU3 409 aaPredicted RBP17.59■□□□□ 0.41
SPG7-221ENST00000569720 A0A087WZG4 1122 aa17.58■□□□□ 0.4
SPG7-221ENST00000569720 ZNF790Q6PG37 636 aa17.58■□□□□ 0.4
SPG7-221ENST00000569720 IL17REQ8NFR9 667 aa17.58■□□□□ 0.4
SPG7-221ENST00000569720 HEG1Q9ULI3 1381 aa17.57■□□□□ 0.4
SPG7-221ENST00000569720 CHRNA5P30532 468 aa17.57■□□□□ 0.4
SPG7-221ENST00000569720 NFIXQ14938 502 aa17.57■□□□□ 0.4
SPG7-221ENST00000569720 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
SPG7-221ENST00000569720 KIF3CO14782 793 aa17.56■□□□□ 0.4
SPG7-221ENST00000569720 HSPA6P17066 643 aa17.56■□□□□ 0.4
SPG7-221ENST00000569720 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SPG7-221ENST00000569720 C9orf131Q5VYM1 1079 aa17.56■□□□□ 0.4
SPG7-221ENST00000569720 NPM2Q86SE8 214 aaKnown RBP17.56■□□□□ 0.4
SPG7-221ENST00000569720 ZNF496Q96IT1 587 aaPredicted RBP17.56■□□□□ 0.4
SPG7-221ENST00000569720 SERPINB2P05120 415 aa17.55■□□□□ 0.4
SPG7-221ENST00000569720 FMNL2Q96PY5 1086 aa17.55■□□□□ 0.4
SPG7-221ENST00000569720 CEP350Q5VT06 3117 aa17.55■□□□□ 0.4
SPG7-221ENST00000569720 DLEC1Q9Y238 1755 aa17.54■□□□□ 0.4
SPG7-221ENST00000569720 EIF5P55010 431 aaKnown RBP17.54■□□□□ 0.4
SPG7-221ENST00000569720 PHACTR3Q96KR7 559 aa17.54■□□□□ 0.4
SPG7-221ENST00000569720 RSPH6AQ9H0K4 717 aa17.54■□□□□ 0.4
SPG7-221ENST00000569720 BCL2L12Q9HB09 334 aa17.54■□□□□ 0.4
SPG7-221ENST00000569720 SBF1O95248 1867 aa17.54■□□□□ 0.4
SPG7-221ENST00000569720 CEMIPQ8WUJ3 1361 aa17.53■□□□□ 0.4
SPG7-221ENST00000569720 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
SPG7-221ENST00000569720 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
SPG7-221ENST00000569720 PPP2R1AP30153 589 aa17.53■□□□□ 0.4
SPG7-221ENST00000569720 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
SPG7-221ENST00000569720 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
SPG7-221ENST00000569720 ZNF330Q9Y3S2 320 aaPredicted RBP17.53■□□□□ 0.4
SPG7-221ENST00000569720 SCN7AQ01118 1682 aa17.52■□□□□ 0.4
SPG7-221ENST00000569720 TOMM70O94826 608 aa17.52■□□□□ 0.4
SPG7-221ENST00000569720 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
SPG7-221ENST00000569720 BICDL1Q6ZP65 573 aa17.52■□□□□ 0.4
SPG7-221ENST00000569720 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
SPG7-221ENST00000569720 KDM2BQ8NHM5 1336 aa17.5■□□□□ 0.39
SPG7-221ENST00000569720 H0YIN7 160 aa17.5■□□□□ 0.39
SPG7-221ENST00000569720 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
SPG7-221ENST00000569720 C16orf71Q8IYS4 520 aaPredicted RBP17.5■□□□□ 0.39
SPG7-221ENST00000569720 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
SPG7-221ENST00000569720 NMRK2Q9NPI5 230 aa17.49■□□□□ 0.39
SPG7-221ENST00000569720 PDZRN3Q9UPQ7 1066 aa17.49■□□□□ 0.39
SPG7-221ENST00000569720 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
SPG7-221ENST00000569720 A1BGP04217 495 aa17.48■□□□□ 0.39
SPG7-221ENST00000569720 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
SPG7-221ENST00000569720 CARMIL3Q8ND23 1372 aa17.48■□□□□ 0.39
SPG7-221ENST00000569720 CCDC88AQ3V6T2 1871 aa17.48■□□□□ 0.39
SPG7-221ENST00000569720 NPHP1O15259 732 aa17.47■□□□□ 0.39
SPG7-221ENST00000569720 KCNQ3O43525 872 aa17.47■□□□□ 0.39
SPG7-221ENST00000569720 HTATSF1O43719 755 aaKnown RBP17.47■□□□□ 0.39
SPG7-221ENST00000569720 NEFMP07197 916 aa17.47■□□□□ 0.39
SPG7-221ENST00000569720 PDE6BP35913 854 aa17.47■□□□□ 0.39
SPG7-221ENST00000569720 TNRC6CQ9HCJ0 1690 aaKnown RBP17.47■□□□□ 0.39
SPG7-221ENST00000569720 ANKRD31Q8N7Z5 1873 aa17.47■□□□□ 0.39
SPG7-221ENST00000569720 BCORQ6W2J9 1755 aa17.46■□□□□ 0.39
SPG7-221ENST00000569720 APLP1P51693 650 aa17.46■□□□□ 0.39
SPG7-221ENST00000569720 MCM10Q7L590 875 aa17.46■□□□□ 0.39
SPG7-221ENST00000569720 SETDB2Q96T68 719 aa17.46■□□□□ 0.39
SPG7-221ENST00000569720 BRIP1Q9BX63 1249 aa17.46■□□□□ 0.39
SPG7-221ENST00000569720 ZC3H4Q9UPT8 1303 aaKnown RBP17.46■□□□□ 0.38
SPG7-221ENST00000569720 SNRPA1P09661 255 aaKnown RBP17.45■□□□□ 0.38
SPG7-221ENST00000569720 LMNB1P20700 586 aa17.45■□□□□ 0.38
SPG7-221ENST00000569720 RASSF7Q02833 373 aa17.45■□□□□ 0.38
SPG7-221ENST00000569720 DZIP3Q86Y13 1208 aaKnown RBP17.45■□□□□ 0.38
SPG7-221ENST00000569720 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
SPG7-221ENST00000569720 CAMTA2O94983 1202 aa17.44■□□□□ 0.38
SPG7-221ENST00000569720 PRR5LQ6MZQ0 368 aa17.44■□□□□ 0.38
SPG7-221ENST00000569720 CNBD1Q8NA66 436 aa17.44■□□□□ 0.38
SPG7-221ENST00000569720 ZNF622Q969S3 477 aaKnown RBP eCLIP17.44■□□□□ 0.38
SPG7-221ENST00000569720 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
SPG7-221ENST00000569720 ST5P78524 1137 aa17.43■□□□□ 0.38
SPG7-221ENST00000569720 RRAGCQ9HB90 399 aa17.43■□□□□ 0.38
SPG7-221ENST00000569720 ZNF652Q9Y2D9 606 aa17.43■□□□□ 0.38
SPG7-221ENST00000569720 DLG5Q8TDM6 1919 aa17.43■□□□□ 0.38
SPG7-221ENST00000569720 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
SPG7-221ENST00000569720 DCTN1Q14203 1278 aa17.42■□□□□ 0.38
SPG7-221ENST00000569720 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
SPG7-221ENST00000569720 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
SPG7-221ENST00000569720 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
SPG7-221ENST00000569720 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
SPG7-221ENST00000569720 FSTL1Q12841 308 aa17.41■□□□□ 0.38
SPG7-221ENST00000569720 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
SPG7-221ENST00000569720 PRAMEF22A3QJZ6 481 aa17.4■□□□□ 0.38
SPG7-221ENST00000569720 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
SPG7-221ENST00000569720 DICER1Q9UPY3 1922 aaKnown RBP17.4■□□□□ 0.38
SPG7-221ENST00000569720 FER1L6Q2WGJ9 1857 aa17.39■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms