RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 HDGFL1Q5TGJ6 251 aa30.17■■■□□ 2.42
RAB40C-212ENST00000569575 TSPYL6Q8N831 410 aa30.17■■■□□ 2.42
RAB40C-212ENST00000569575 COL5A3P25940 1745 aaPredicted RBP30.16■■■□□ 2.42
RAB40C-212ENST00000569575 ELL2O00472 640 aaPredicted RBP30.16■■■□□ 2.42
RAB40C-212ENST00000569575 KRT24Q2M2I5 525 aa30.16■■■□□ 2.42
RAB40C-212ENST00000569575 ALDH1L2Q3SY69 923 aa30.16■■■□□ 2.42
RAB40C-212ENST00000569575 LRRC4BQ9NT99 713 aa30.16■■■□□ 2.42
RAB40C-212ENST00000569575 DBF4Q9UBU7 674 aaPredicted RBP30.16■■■□□ 2.42
RAB40C-212ENST00000569575 EZH2Q15910 746 aaKnown RBP30.15■■■□□ 2.42
RAB40C-212ENST00000569575 STK31Q9BXU1 1019 aa30.14■■■□□ 2.42
RAB40C-212ENST00000569575 CCDC87Q9NVE4 849 aa30.14■■■□□ 2.42
RAB40C-212ENST00000569575 RREB1Q92766 1687 aa30.14■■■□□ 2.41
RAB40C-212ENST00000569575 EIF2S2P20042 333 aaKnown RBP30.12■■■□□ 2.41
RAB40C-212ENST00000569575 DEFB132Q7Z7B7 95 aa30.12■■■□□ 2.41
RAB40C-212ENST00000569575 LINC00116Q8NCU8 138 aa30.12■■■□□ 2.41
RAB40C-212ENST00000569575 DDX21Q9NR30 783 aaKnown RBP eCLIP30.12■■■□□ 2.41
RAB40C-212ENST00000569575 PRAMEF22A3QJZ6 481 aa30.11■■■□□ 2.41
RAB40C-212ENST00000569575 IL6STP40189 918 aaPredicted RBP30.11■■■□□ 2.41
RAB40C-212ENST00000569575 CRKLP46109 303 aaKnown RBP30.11■■■□□ 2.41
RAB40C-212ENST00000569575 HYPKQ9NX55 129 aa30.11■■■□□ 2.41
RAB40C-212ENST00000569575 BRPF1P55201 1214 aaPredicted RBP30.1■■■□□ 2.41
RAB40C-212ENST00000569575 C4BP0C0L5 1744 aa30.09■■■□□ 2.41
RAB40C-212ENST00000569575 INTS5Q6P9B9 1019 aaKnown RBP30.09■■■□□ 2.41
RAB40C-212ENST00000569575 NPM2Q86SE8 214 aaKnown RBP30.09■■■□□ 2.41
RAB40C-212ENST00000569575 RPS6KA4O75676 772 aa30.08■■■□□ 2.41
RAB40C-212ENST00000569575 ADRA2BP18089 450 aa30.08■■■□□ 2.41
RAB40C-212ENST00000569575 NBPF14Q5TI25 921 aa30.08■■■□□ 2.41
RAB40C-212ENST00000569575 FLAD1Q8NFF5 587 aa30.08■■■□□ 2.41
RAB40C-212ENST00000569575 AK7Q96M32 723 aa30.07■■■□□ 2.4
RAB40C-212ENST00000569575 A0A087WZG4 1122 aa30.06■■■□□ 2.4
RAB40C-212ENST00000569575 RTCBQ9Y3I0 505 aaKnown RBP30.06■■■□□ 2.4
RAB40C-212ENST00000569575 A1BGP04217 495 aa30.05■■■□□ 2.4
RAB40C-212ENST00000569575 RARSP54136 660 aaKnown RBP30.05■■■□□ 2.4
RAB40C-212ENST00000569575 PDIA6Q15084 440 aa30.05■■■□□ 2.4
RAB40C-212ENST00000569575 AKT1S1Q96B36 256 aa30.05■■■□□ 2.4
RAB40C-212ENST00000569575 MYH14Q7Z406 1995 aaKnown RBP30.04■■■□□ 2.4
RAB40C-212ENST00000569575 RGL2O15211 777 aa30.04■■■□□ 2.4
RAB40C-212ENST00000569575 KCNQ4P56696 695 aa30.04■■■□□ 2.4
RAB40C-212ENST00000569575 STK32BQ9NY57 414 aa30.04■■■□□ 2.4
RAB40C-212ENST00000569575 CHPF2Q9P2E5 772 aa30.04■■■□□ 2.4
RAB40C-212ENST00000569575 NUP188Q5SRE5 1749 aa30.03■■■□□ 2.4
RAB40C-212ENST00000569575 SLC4A2P04920 1241 aa30.03■■■□□ 2.4
RAB40C-212ENST00000569575 SSFA2P28290 1259 aa30.03■■■□□ 2.4
RAB40C-212ENST00000569575 EIF5P55010 431 aaKnown RBP30.03■■■□□ 2.4
RAB40C-212ENST00000569575 ZBTB1Q9Y2K1 713 aa30.03■■■□□ 2.4
RAB40C-212ENST00000569575 NBPF26B4DH59 902 aa30.02■■■□□ 2.4
RAB40C-212ENST00000569575 NBPF10Q6P3W6 841 aaKnown RBP30.02■■■□□ 2.4
RAB40C-212ENST00000569575 NBPF15Q8N660 670 aa30.02■■■□□ 2.4
RAB40C-212ENST00000569575 RCAN3Q9UKA8 241 aa30.02■■■□□ 2.4
RAB40C-212ENST00000569575 GNPATO15228 680 aa30.01■■■□□ 2.39
RAB40C-212ENST00000569575 CANXP27824 592 aaKnown RBP30.01■■■□□ 2.39
RAB40C-212ENST00000569575 SSH1Q8WYL5 1049 aa30.01■■■□□ 2.39
RAB40C-212ENST00000569575 SLC15A2Q16348 729 aa30■■■□□ 2.39
RAB40C-212ENST00000569575 SMC4Q9NTJ3 1288 aa30■■■□□ 2.39
RAB40C-212ENST00000569575 KIF16BQ96L93 1317 aa29.99■■■□□ 2.39
RAB40C-212ENST00000569575 CENPBP07199 599 aaPredicted RBP29.99■■■□□ 2.39
RAB40C-212ENST00000569575 LRP10Q7Z4F1 713 aa29.99■■■□□ 2.39
RAB40C-212ENST00000569575 NECTIN2Q92692 538 aa29.99■■■□□ 2.39
RAB40C-212ENST00000569575 SOCS7O14512 581 aa29.98■■■□□ 2.39
RAB40C-212ENST00000569575 DDX58O95786 925 aaKnown RBP29.98■■■□□ 2.39
RAB40C-212ENST00000569575 TRAPPC3LQ5T215 181 aa29.98■■■□□ 2.39
RAB40C-212ENST00000569575 MRPL50Q8N5N7 158 aaKnown RBP29.98■■■□□ 2.39
RAB40C-212ENST00000569575 TFCP2L1Q9NZI6 479 aa29.98■■■□□ 2.39
RAB40C-212ENST00000569575 PTPRCP08575 1304 aa29.97■■■□□ 2.39
RAB40C-212ENST00000569575 UBR3Q6ZT12 1888 aa29.97■■■□□ 2.39
RAB40C-212ENST00000569575 QSER1Q2KHR3 1735 aa29.97■■■□□ 2.39
RAB40C-212ENST00000569575 IPO8O15397 1037 aaKnown RBP29.97■■■□□ 2.39
RAB40C-212ENST00000569575 ARHGAP45Q92619 1136 aa29.97■■■□□ 2.39
RAB40C-212ENST00000569575 MYL6BP14649 208 aa29.96■■■□□ 2.39
RAB40C-212ENST00000569575 COL15A1P39059 1388 aa29.95■■■□□ 2.39
RAB40C-212ENST00000569575 ERVV-1B6SEH8 477 aa29.94■■■□□ 2.38
RAB40C-212ENST00000569575 FLIIQ13045 1269 aa29.93■■■□□ 2.38
RAB40C-212ENST00000569575 ZNF827Q17R98 1081 aa29.93■■■□□ 2.38
RAB40C-212ENST00000569575 PROSER3Q2NL68 480 aa29.93■■■□□ 2.38
RAB40C-212ENST00000569575 KIF6Q6ZMV9 814 aa29.93■■■□□ 2.38
RAB40C-212ENST00000569575 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.92■■■□□ 2.38
RAB40C-212ENST00000569575 COPS6Q7L5N1 327 aa29.92■■■□□ 2.38
RAB40C-212ENST00000569575 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.92■■■□□ 2.38
RAB40C-212ENST00000569575 RFC4P35249 363 aa29.91■■■□□ 2.38
RAB40C-212ENST00000569575 ANKRD13DQ6ZTN6 518 aa29.91■■■□□ 2.38
RAB40C-212ENST00000569575 XAGE3Q8WTP9 111 aa29.91■■■□□ 2.38
RAB40C-212ENST00000569575 NARFQ9UHQ1 456 aa29.91■■■□□ 2.38
RAB40C-212ENST00000569575 CLEC4GQ6UXB4 293 aa29.9■■■□□ 2.38
RAB40C-212ENST00000569575 DZIP3Q86Y13 1208 aaKnown RBP29.9■■■□□ 2.38
RAB40C-212ENST00000569575 PLBD2Q8NHP8 589 aa29.9■■■□□ 2.38
RAB40C-212ENST00000569575 ARHGEF1Q92888 912 aaKnown RBP29.9■■■□□ 2.38
RAB40C-212ENST00000569575 TCERG1O14776 1098 aaKnown RBP29.89■■■□□ 2.38
RAB40C-212ENST00000569575 ZPR1O75312 459 aa29.89■■■□□ 2.38
RAB40C-212ENST00000569575 MS4A1P11836 297 aa29.89■■■□□ 2.38
RAB40C-212ENST00000569575 API5Q9BZZ5 524 aaKnown RBP29.89■■■□□ 2.38
RAB40C-212ENST00000569575 PHAXQ9H814 394 aaKnown RBP29.89■■■□□ 2.38
RAB40C-212ENST00000569575 ANO8Q9HCE9 1232 aaPredicted RBP29.89■■■□□ 2.38
RAB40C-212ENST00000569575 ZNF652Q9Y2D9 606 aa29.89■■■□□ 2.38
RAB40C-212ENST00000569575 ANXA1P04083 346 aa29.88■■■□□ 2.37
RAB40C-212ENST00000569575 PIP4K2AP48426 406 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-212ENST00000569575 KSR2Q6VAB6 950 aa29.88■■■□□ 2.37
RAB40C-212ENST00000569575 SLC16A10Q8TF71 515 aa29.88■■■□□ 2.37
RAB40C-212ENST00000569575 ZNF330Q9Y3S2 320 aaPredicted RBP29.88■■■□□ 2.37
RAB40C-212ENST00000569575 MAP3K15Q6ZN16 1313 aa29.88■■■□□ 2.37
RAB40C-212ENST00000569575 BCAR3O75815 825 aa29.87■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms