RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 SLC52A2Q9HAB3 445 aa9.73□□□□□ -0.85
CDH13-214ENST00000569455 TRIM27P14373 513 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 CABP4P57796 275 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 EIF4A1P60842 406 aaKnown RBP9.72□□□□□ -0.85
CDH13-214ENST00000569455 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 BCL11BQ9C0K0 894 aaPredicted RBP9.72□□□□□ -0.85
CDH13-214ENST00000569455 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 PTPRCP08575 1304 aa9.72□□□□□ -0.85
CDH13-214ENST00000569455 ERVV-2B6SEH9 535 aa9.71□□□□□ -0.86
CDH13-214ENST00000569455 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
CDH13-214ENST00000569455 GIGYF1O75420 1035 aaPredicted RBP9.71□□□□□ -0.86
CDH13-214ENST00000569455 APBA3O96018 575 aa9.71□□□□□ -0.86
CDH13-214ENST00000569455 MVPQ14764 893 aaKnown RBP9.71□□□□□ -0.86
CDH13-214ENST00000569455 TTC5Q8N0Z6 440 aa9.71□□□□□ -0.86
CDH13-214ENST00000569455 DDX54Q8TDD1 881 aaKnown RBP9.71□□□□□ -0.86
CDH13-214ENST00000569455 DDX19BQ9UMR2 479 aa9.71□□□□□ -0.86
CDH13-214ENST00000569455 RGPD3A6NKT7 1758 aaPredicted RBP9.7□□□□□ -0.86
CDH13-214ENST00000569455 RGPD4Q7Z3J3 1758 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 TRIM37O94972 964 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 SLC4A2P04920 1241 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 HDGFL1Q5TGJ6 251 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 ZNF790Q6PG37 636 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 NFATC2IPQ8NCF5 419 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 NHSQ6T4R5 1651 aa9.7□□□□□ -0.86
CDH13-214ENST00000569455 PLSCR1O15162 318 aa9.69□□□□□ -0.86
CDH13-214ENST00000569455 RLBP1P12271 317 aa9.69□□□□□ -0.86
CDH13-214ENST00000569455 CASZ1Q86V15 1759 aa9.69□□□□□ -0.86
CDH13-214ENST00000569455 ITPRIPQ8IWB1 547 aa9.69□□□□□ -0.86
CDH13-214ENST00000569455 TNNQ9UQP3 1299 aa9.69□□□□□ -0.86
CDH13-214ENST00000569455 ITGB4P16144 1822 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 HEG1Q9ULI3 1381 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 ABCC4O15439 1325 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 KCNQ3O43525 872 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 TMEM57Q8N5G2 664 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 UBR2Q8IWV8 1755 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 TOGARAM1Q9Y4F4 1720 aa9.68□□□□□ -0.86
CDH13-214ENST00000569455 PAPPAQ13219 1627 aa9.67□□□□□ -0.86
CDH13-214ENST00000569455 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
CDH13-214ENST00000569455 FMNL2Q96PY5 1086 aa9.67□□□□□ -0.86
CDH13-214ENST00000569455 TMOD3Q9NYL9 352 aa9.67□□□□□ -0.86
CDH13-214ENST00000569455 DOT1LQ8TEK3 1739 aa9.67□□□□□ -0.86
CDH13-214ENST00000569455 C5P01031 1676 aa9.67□□□□□ -0.86
CDH13-214ENST00000569455 N4BP2Q86UW6 1770 aaPredicted RBP9.66□□□□□ -0.86
CDH13-214ENST00000569455 SNRPA1P09661 255 aaKnown RBP9.66□□□□□ -0.86
CDH13-214ENST00000569455 FLIIQ13045 1269 aa9.66□□□□□ -0.86
CDH13-214ENST00000569455 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
CDH13-214ENST00000569455 CENPQQ7L2Z9 268 aaPredicted RBP9.66□□□□□ -0.86
CDH13-214ENST00000569455 DBF4Q9UBU7 674 aaPredicted RBP9.66□□□□□ -0.86
CDH13-214ENST00000569455 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 CCT4P50991 539 aaKnown RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 FKBP5Q13451 457 aaPredicted RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
CDH13-214ENST00000569455 SMARCC1Q92922 1105 aaPredicted RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 ZNF496Q96IT1 587 aaPredicted RBP9.65□□□□□ -0.86
CDH13-214ENST00000569455 HYPKQ9NX55 129 aa9.65□□□□□ -0.86
CDH13-214ENST00000569455 BTAF1O14981 1849 aa9.65□□□□□ -0.86
CDH13-214ENST00000569455 PXDNLA1KZ92 1463 aa9.65□□□□□ -0.87
CDH13-214ENST00000569455 SLC27A3Q5K4L6 730 aa9.64□□□□□ -0.87
CDH13-214ENST00000569455 G2E3Q7L622 706 aa9.64□□□□□ -0.87
CDH13-214ENST00000569455 RWDD1Q9H446 243 aaPredicted RBP9.64□□□□□ -0.87
CDH13-214ENST00000569455 CHPF2Q9P2E5 772 aa9.64□□□□□ -0.87
CDH13-214ENST00000569455 ZNF831Q5JPB2 1677 aa9.64□□□□□ -0.87
CDH13-214ENST00000569455 ERBB4Q15303 1308 aa9.63□□□□□ -0.87
CDH13-214ENST00000569455 DDX58O95786 925 aaKnown RBP9.63□□□□□ -0.87
CDH13-214ENST00000569455 SYT17Q9BSW7 474 aa9.63□□□□□ -0.87
CDH13-214ENST00000569455 DDX21Q9NR30 783 aaKnown RBP eCLIP9.63□□□□□ -0.87
CDH13-214ENST00000569455 ZBTB40Q9NUA8 1239 aa9.63□□□□□ -0.87
CDH13-214ENST00000569455 LY75O60449 1722 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 KCPQ6ZWJ8 1503 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 KDM2BQ8NHM5 1336 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
CDH13-214ENST00000569455 PTGER2P43116 358 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 SLC4A10Q6U841 1118 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 PIGBQ92521 554 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 SYTL4Q96C24 671 aaPredicted RBP9.62□□□□□ -0.87
CDH13-214ENST00000569455 ACSBG1Q96GR2 724 aa9.62□□□□□ -0.87
CDH13-214ENST00000569455 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
CDH13-214ENST00000569455 FHDC1Q9C0D6 1143 aaPredicted RBP9.62□□□□□ -0.87
CDH13-214ENST00000569455 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
CDH13-214ENST00000569455 PHAXQ9H814 394 aaKnown RBP9.61□□□□□ -0.87
CDH13-214ENST00000569455 PCDHB15Q9Y5E8 787 aa9.61□□□□□ -0.87
CDH13-214ENST00000569455 PRAMEF22A3QJZ6 481 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 F6X3S4 739 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 ZBTB7AO95365 584 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 HDAC1Q13547 482 aaPredicted RBP9.6□□□□□ -0.87
CDH13-214ENST00000569455 KSR2Q6VAB6 950 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 DNAAF4Q8WXU2 420 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 USP16Q9Y5T5 823 aa9.6□□□□□ -0.87
CDH13-214ENST00000569455 ATP10DQ9P241 1426 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
CDH13-214ENST00000569455 ANXA1P04083 346 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 GNAI3P08754 354 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 PDIA6Q15084 440 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 TXNRD1Q16881 649 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 SRCIN1Q9C0H9 1055 aa9.59□□□□□ -0.87
CDH13-214ENST00000569455 ANO8Q9HCE9 1232 aaPredicted RBP9.59□□□□□ -0.87
CDH13-214ENST00000569455 ATG3Q9NT62 314 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms