RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 EIF4A1P60842 406 aaKnown RBP10.71□□□□□ -0.69
LINC00558-201ENST00000569422 FOXD4L6Q3SYB3 417 aaPredicted RBP10.71□□□□□ -0.69
LINC00558-201ENST00000569422 FOXD4L3Q6VB84 417 aaPredicted RBP10.71□□□□□ -0.69
LINC00558-201ENST00000569422 ST18O60284 1047 aa10.71□□□□□ -0.69
LINC00558-201ENST00000569422 MCTP1Q6DN14 999 aa10.71□□□□□ -0.69
LINC00558-201ENST00000569422 PROSER2Q86WR7 435 aaPredicted RBP10.71□□□□□ -0.69
LINC00558-201ENST00000569422 ANKRD24Q8TF21 1146 aa10.71□□□□□ -0.69
LINC00558-201ENST00000569422 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
LINC00558-201ENST00000569422 TOPAZ1Q8N9V7 1692 aa10.71□□□□□ -0.7
LINC00558-201ENST00000569422 CHRM1P11229 460 aaPredicted RBP10.71□□□□□ -0.7
LINC00558-201ENST00000569422 PLEKHO1Q53GL0 409 aaPredicted RBP10.71□□□□□ -0.7
LINC00558-201ENST00000569422 KCNH5Q8NCM2 988 aa10.7□□□□□ -0.7
LINC00558-201ENST00000569422 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
LINC00558-201ENST00000569422 PIK3C2AO00443 1686 aa10.7□□□□□ -0.7
LINC00558-201ENST00000569422 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
LINC00558-201ENST00000569422 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 DNAAF4Q8WXU2 420 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 PALD1Q9ULE6 856 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 PIP4K2AP48426 406 aaPredicted RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 CWF19L2Q2TBE0 894 aaKnown RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 CNPY4Q8N129 248 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 CABLES1Q8TDN4 633 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 PRDM10Q9NQV6 1147 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 NLRP2Q9NX02 1062 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 C9orf78Q9NZ63 289 aaPredicted RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 CIZ1Q9ULV3 898 aaPredicted RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 DDX49Q9Y6V7 483 aaKnown RBP10.69□□□□□ -0.7
LINC00558-201ENST00000569422 ANKARQ7Z5J8 1434 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 DTNBO60941 627 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
LINC00558-201ENST00000569422 GOLGA6L22H0YM25 854 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 MYL6BP14649 208 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 PA2G4Q9UQ80 394 aaKnown RBP10.68□□□□□ -0.7
LINC00558-201ENST00000569422 SOS1Q07889 1333 aaPredicted RBP10.68□□□□□ -0.7
LINC00558-201ENST00000569422 CSB-PGBD3P0DP91 1061 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 CHMLP26374 656 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 AKAP4Q5JQC9 854 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 TEX2Q8IWB9 1127 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 RHPN1Q8TCX5 695 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 IL25Q9H293 177 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 MAP3K2Q9Y2U5 619 aa10.68□□□□□ -0.7
LINC00558-201ENST00000569422 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 RNMTO43148 476 aaKnown RBP10.67□□□□□ -0.7
LINC00558-201ENST00000569422 BAG4O95429 457 aaKnown RBP10.67□□□□□ -0.7
LINC00558-201ENST00000569422 JARID2Q92833 1246 aaPredicted RBP10.67□□□□□ -0.7
LINC00558-201ENST00000569422 RGPD1P0DJD0 1748 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 GAS2L3Q86XJ1 694 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 OSBPL3Q9H4L5 887 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 IBTKQ9P2D0 1353 aaPredicted RBP10.67□□□□□ -0.7
LINC00558-201ENST00000569422 FER1L4A9Z1Z3 1794 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 BEND3Q5T5X7 828 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 ARHGEF25Q86VW2 580 aa10.67□□□□□ -0.7
LINC00558-201ENST00000569422 CHRNA2Q15822 529 aa10.66□□□□□ -0.7
LINC00558-201ENST00000569422 NALCNQ8IZF0 1738 aa10.66□□□□□ -0.7
LINC00558-201ENST00000569422 MCCP23508 829 aa10.66□□□□□ -0.7
LINC00558-201ENST00000569422 CWC27Q6UX04 472 aaKnown RBP10.66□□□□□ -0.7
LINC00558-201ENST00000569422 SIL1Q9H173 461 aa10.66□□□□□ -0.7
LINC00558-201ENST00000569422 GRPEL1Q9HAV7 217 aa10.66□□□□□ -0.7
LINC00558-201ENST00000569422 PRPF40AO75400 957 aaKnown RBP10.65□□□□□ -0.7
LINC00558-201ENST00000569422 DDX54Q8TDD1 881 aaKnown RBP10.65□□□□□ -0.7
LINC00558-201ENST00000569422 SSH3Q8TE77 659 aa10.65□□□□□ -0.7
LINC00558-201ENST00000569422 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
LINC00558-201ENST00000569422 TMX3Q96JJ7 454 aa10.65□□□□□ -0.7
LINC00558-201ENST00000569422 DBF4Q9UBU7 674 aaPredicted RBP10.65□□□□□ -0.7
LINC00558-201ENST00000569422 NWD1Q149M9 1564 aa10.65□□□□□ -0.71
LINC00558-201ENST00000569422 FSD2A1L4K1 749 aa10.65□□□□□ -0.71
LINC00558-201ENST00000569422 CLSTN1O94985 981 aa10.65□□□□□ -0.71
LINC00558-201ENST00000569422 CAVIN1Q6NZI2 390 aaKnown RBP10.65□□□□□ -0.71
LINC00558-201ENST00000569422 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
LINC00558-201ENST00000569422 AMOTQ4VCS5 1084 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 IPO4Q8TEX9 1081 aaKnown RBP10.64□□□□□ -0.71
LINC00558-201ENST00000569422 RAPGEF4Q8WZA2 1011 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 SECISBP2LQ93073 1101 aaKnown RBP10.64□□□□□ -0.71
LINC00558-201ENST00000569422 CEMIPQ8WUJ3 1361 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 NUCB2P80303 420 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 NFATC2IPQ8NCF5 419 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 KLHDC4Q8TBB5 520 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 KIF1BPQ96EK5 621 aa10.64□□□□□ -0.71
LINC00558-201ENST00000569422 MRE11P49959 708 aa10.63□□□□□ -0.71
LINC00558-201ENST00000569422 RIC3Q7Z5B4 369 aa10.63□□□□□ -0.71
LINC00558-201ENST00000569422 BABAM1Q9NWV8 329 aa10.63□□□□□ -0.71
LINC00558-201ENST00000569422 CPA1P15085 419 aa10.63□□□□□ -0.71
LINC00558-201ENST00000569422 RRAGDQ9NQL2 400 aaPredicted RBP10.63□□□□□ -0.71
LINC00558-201ENST00000569422 SKOR2Q2VWA4 1001 aaPredicted RBP10.63□□□□□ -0.71
LINC00558-201ENST00000569422 RBM27Q9P2N5 1060 aaKnown RBP10.63□□□□□ -0.71
LINC00558-201ENST00000569422 FMN2Q9NZ56 1722 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 CLASRPQ8N2M8 674 aaKnown RBP10.62□□□□□ -0.71
LINC00558-201ENST00000569422 CCDC8Q9H0W5 538 aaPredicted RBP10.62□□□□□ -0.71
LINC00558-201ENST00000569422 ADCY9O60503 1353 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 PXDNQ92626 1479 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 RAB11FIP3O75154 756 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 IFIT2P09913 472 aaKnown RBP10.62□□□□□ -0.71
LINC00558-201ENST00000569422 ATF3P18847 181 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 ZDHHC9Q9Y397 364 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 ADGRL3Q9HAR2 1447 aa10.62□□□□□ -0.71
LINC00558-201ENST00000569422 XRN1Q8IZH2 1706 aaKnown RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms