RNA–Protein interactions for RNA: ENST00000569363.1

SPG7-220, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-220ENST00000569363 NAP1L5Q96NT1 182 aaPredicted RBP9.72□□□□□ -0.85
SPG7-220ENST00000569363 USP44Q9H0E7 712 aa9.72□□□□□ -0.85
SPG7-220ENST00000569363 ANO2Q9NQ90 1003 aa9.72□□□□□ -0.85
SPG7-220ENST00000569363 U3KPZ7 1027 aaPredicted RBP9.72□□□□□ -0.85
SPG7-220ENST00000569363 MARF1Q9Y4F3 1742 aaKnown RBP9.72□□□□□ -0.85
SPG7-220ENST00000569363 CEMIPQ8WUJ3 1361 aa9.72□□□□□ -0.85
SPG7-220ENST00000569363 NCAPD2Q15021 1401 aa9.72□□□□□ -0.85
SPG7-220ENST00000569363 RGPD8O14715 1765 aaPredicted RBP9.71□□□□□ -0.85
SPG7-220ENST00000569363 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 PHF14O94880 888 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 ZSCAN30Q86W11 494 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 CNTROBQ8N137 903 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 ZGPATQ8N5A5 531 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 ZDHHC9Q9Y397 364 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 TTC41PQ6P2S7 1318 aa9.71□□□□□ -0.86
SPG7-220ENST00000569363 WDR33Q9C0J8 1336 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 USP42Q9H9J4 1324 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 PHRF1Q9P1Y6 1649 aaKnown RBP9.71□□□□□ -0.86
SPG7-220ENST00000569363 SURF6O75683 361 aaKnown RBP9.7□□□□□ -0.86
SPG7-220ENST00000569363 PLEKHG5O94827 1062 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 TPM2P07951 284 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 HSPA4P34932 840 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 HSPA2P54652 639 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 EIF4A1P60842 406 aaKnown RBP9.7□□□□□ -0.86
SPG7-220ENST00000569363 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 PLEKHO1Q53GL0 409 aaPredicted RBP9.7□□□□□ -0.86
SPG7-220ENST00000569363 LRSAM1Q6UWE0 723 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 KIAA1211Q6ZU35 1233 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 RUFY2Q8WXA3 655 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 GPATCH3Q96I76 525 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 KDM3BQ7LBC6 1761 aa9.7□□□□□ -0.86
SPG7-220ENST00000569363 STRCP1A6NGW2 1772 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 ALDH1L1O75891 902 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 PDIA4P13667 645 aaKnown RBP9.69□□□□□ -0.86
SPG7-220ENST00000569363 MSNP26038 577 aaKnown RBP9.69□□□□□ -0.86
SPG7-220ENST00000569363 MCM5P33992 734 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 MTX1Q13505 466 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 AKAP4Q5JQC9 854 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 PPP1R42Q7Z4L9 355 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 ERC1Q8IUD2 1116 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 LMO7Q8WWI1 1683 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 DNAAF4Q8WXU2 420 aa9.69□□□□□ -0.86
SPG7-220ENST00000569363 NFAT5O94916 1531 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 RAD50Q92878 1312 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 SGSM2O43147 1006 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 GLRX3O76003 335 aaKnown RBP9.68□□□□□ -0.86
SPG7-220ENST00000569363 LETM1O95202 739 aaPredicted RBP9.68□□□□□ -0.86
SPG7-220ENST00000569363 KCNA6P17658 529 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 TEFQ10587 303 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 PKP1Q13835 747 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 CSPP1Q1MSJ5 1256 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 BEND3Q5T5X7 828 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 GPT2Q8TD30 523 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 NECTIN2Q92692 538 aa9.68□□□□□ -0.86
SPG7-220ENST00000569363 LTV1Q96GA3 475 aaPredicted RBP9.68□□□□□ -0.86
SPG7-220ENST00000569363 DBF4Q9UBU7 674 aaPredicted RBP9.68□□□□□ -0.86
SPG7-220ENST00000569363 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.68□□□□□ -0.86
SPG7-220ENST00000569363 HIP1O00291 1037 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 TERF1P54274 439 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.67□□□□□ -0.86
SPG7-220ENST00000569363 C14orf37Q86TY3 774 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 TMEM87AQ8NBN3 555 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 PI4K2BQ8TCG2 481 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 PDLIM2Q96JY6 352 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 RBSNQ9H1K0 784 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 PHAXQ9H814 394 aaKnown RBP9.67□□□□□ -0.86
SPG7-220ENST00000569363 CCDC39Q9UFE4 941 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 ATP6V1DQ9Y5K8 247 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 LTN1O94822 1766 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 LTBP4Q8N2S1 1624 aa9.67□□□□□ -0.86
SPG7-220ENST00000569363 ERBB4Q15303 1308 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 CRYBG1Q9Y4K1 1723 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 OS9Q13438 667 aaPredicted RBP9.66□□□□□ -0.86
SPG7-220ENST00000569363 NUTM2GQ5VZR2 741 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 TSHZ3Q63HK5 1081 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 NUTM1Q86Y26 1132 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 CLASRPQ8N2M8 674 aaKnown RBP9.66□□□□□ -0.86
SPG7-220ENST00000569363 FAM184AQ8NB25 1140 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 ZSCAN31Q96LW9 406 aaPredicted RBP9.66□□□□□ -0.86
SPG7-220ENST00000569363 TSPY26PQ9H489 355 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 IL1RAPL2Q9NP60 686 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 DIAPH3Q9NSV4 1193 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 LIMCH1Q9UPQ0 1083 aa9.66□□□□□ -0.86
SPG7-220ENST00000569363 BTBD11A6QL63 1104 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 OFD1O75665 1012 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 DDX58O95786 925 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 EIF2S2P20042 333 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 PRIM1P49642 420 aaKnown RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 PSME1Q06323 249 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 UVSSAQ2YD98 709 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 ZNF530Q6P9A1 599 aaPredicted RBP9.65□□□□□ -0.86
SPG7-220ENST00000569363 ANKLE2Q86XL3 938 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 UNC5CLQ8IV45 518 aa9.65□□□□□ -0.86
SPG7-220ENST00000569363 TM6SF1Q9BZW5 370 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms