RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
USB1-215ENST00000569252 ASAP1Q9ULH1 1129 aa20.81■□□□□ 0.92
USB1-215ENST00000569252 SCN11AQ9UI33 1791 aa20.81■□□□□ 0.92
USB1-215ENST00000569252 SLC39A6Q13433 755 aa20.8■□□□□ 0.92
USB1-215ENST00000569252 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
USB1-215ENST00000569252 RBM42Q9BTD8 480 aaKnown RBP20.8■□□□□ 0.92
USB1-215ENST00000569252 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
USB1-215ENST00000569252 ATG3Q9NT62 314 aa20.8■□□□□ 0.92
USB1-215ENST00000569252 ITPK1Q13572 414 aa20.79■□□□□ 0.92
USB1-215ENST00000569252 CD2APQ9Y5K6 639 aa20.79■□□□□ 0.92
USB1-215ENST00000569252 ADCY9O60503 1353 aa20.79■□□□□ 0.92
USB1-215ENST00000569252 CHL1O00533 1208 aa20.78■□□□□ 0.92
USB1-215ENST00000569252 PTCD1O75127 700 aaKnown RBP20.78■□□□□ 0.92
USB1-215ENST00000569252 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
USB1-215ENST00000569252 E9PSI1 815 aa20.77■□□□□ 0.92
USB1-215ENST00000569252 GPBP1L1Q9HC44 474 aaPredicted RBP20.77■□□□□ 0.92
USB1-215ENST00000569252 ZBED9Q6R2W3 1325 aa20.77■□□□□ 0.91
USB1-215ENST00000569252 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
USB1-215ENST00000569252 MRC1P22897 1456 aa20.75■□□□□ 0.91
USB1-215ENST00000569252 LOC102724428A0A0B4J2F2 783 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 GNPATO15228 680 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 ZNF853P0CG23 659 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 ATP6V1AP38606 617 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 SIK1P57059 783 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 TEX13AQ9BXU3 409 aaPredicted RBP20.74■□□□□ 0.91
USB1-215ENST00000569252 MBIPQ9NS73 344 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 ZNF521Q96K83 1311 aa20.74■□□□□ 0.91
USB1-215ENST00000569252 IFFO2Q5TF58 517 aa20.73■□□□□ 0.91
USB1-215ENST00000569252 CHMP4AQ9BY43 222 aa20.73■□□□□ 0.91
USB1-215ENST00000569252 N4BP2Q86UW6 1770 aaPredicted RBP20.72■□□□□ 0.91
USB1-215ENST00000569252 VIRMAQ69YN4 1812 aaKnown RBP20.72■□□□□ 0.91
USB1-215ENST00000569252 KCNQ3O43525 872 aa20.72■□□□□ 0.91
USB1-215ENST00000569252 SNRPA1P09661 255 aaKnown RBP20.72■□□□□ 0.91
USB1-215ENST00000569252 VSIG10Q8N0Z9 540 aa20.72■□□□□ 0.91
USB1-215ENST00000569252 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
USB1-215ENST00000569252 KIAA1551Q9HCM1 1747 aa20.72■□□□□ 0.91
USB1-215ENST00000569252 EIF4A1P60842 406 aaKnown RBP20.71■□□□□ 0.91
USB1-215ENST00000569252 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
USB1-215ENST00000569252 TSR2Q969E8 191 aaKnown RBP20.71■□□□□ 0.91
USB1-215ENST00000569252 ZNF496Q96IT1 587 aaPredicted RBP20.71■□□□□ 0.91
USB1-215ENST00000569252 STARD3NLO95772 234 aa20.7■□□□□ 0.9
USB1-215ENST00000569252 SLC4A9Q96Q91 983 aa20.7■□□□□ 0.9
USB1-215ENST00000569252 MMP10P09238 476 aa20.69■□□□□ 0.9
USB1-215ENST00000569252 PXDNLA1KZ92 1463 aa20.69■□□□□ 0.9
USB1-215ENST00000569252 CICQ96RK0 1608 aaPredicted RBP20.68■□□□□ 0.9
USB1-215ENST00000569252 KIF3CO14782 793 aa20.68■□□□□ 0.9
USB1-215ENST00000569252 HSPA6P17066 643 aa20.68■□□□□ 0.9
USB1-215ENST00000569252 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
USB1-215ENST00000569252 SSFA2P28290 1259 aa20.67■□□□□ 0.9
USB1-215ENST00000569252 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
USB1-215ENST00000569252 FANCIQ9NVI1 1328 aa20.67■□□□□ 0.9
USB1-215ENST00000569252 HEG1Q9ULI3 1381 aa20.67■□□□□ 0.9
USB1-215ENST00000569252 A0A0G2JLW4 131 aa20.66■□□□□ 0.9
USB1-215ENST00000569252 NPM2Q86SE8 214 aaKnown RBP20.66■□□□□ 0.9
USB1-215ENST00000569252 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
USB1-215ENST00000569252 ELL2O00472 640 aaPredicted RBP20.65■□□□□ 0.9
USB1-215ENST00000569252 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
USB1-215ENST00000569252 SOS1Q07889 1333 aaPredicted RBP20.64■□□□□ 0.89
USB1-215ENST00000569252 HOXB7P09629 217 aa20.64■□□□□ 0.89
USB1-215ENST00000569252 EIF2S2P20042 333 aaKnown RBP20.64■□□□□ 0.89
USB1-215ENST00000569252 EXOSC9Q06265 439 aaKnown RBP20.64■□□□□ 0.89
USB1-215ENST00000569252 DNAJC10Q8IXB1 793 aa20.64■□□□□ 0.89
USB1-215ENST00000569252 TWISTNBQ3B726 338 aaPredicted RBP20.63■□□□□ 0.89
USB1-215ENST00000569252 BCS1LQ9Y276 419 aa20.63■□□□□ 0.89
USB1-215ENST00000569252 TRMT2AQ8IZ69 625 aaKnown RBP20.62■□□□□ 0.89
USB1-215ENST00000569252 C8orf58Q8NAV2 365 aa20.62■□□□□ 0.89
USB1-215ENST00000569252 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
USB1-215ENST00000569252 MYH14Q7Z406 1995 aaKnown RBP20.61■□□□□ 0.89
USB1-215ENST00000569252 DPEP1P16444 411 aa20.61■□□□□ 0.89
USB1-215ENST00000569252 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
USB1-215ENST00000569252 USP16Q9Y5T5 823 aa20.61■□□□□ 0.89
USB1-215ENST00000569252 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
USB1-215ENST00000569252 CCDC30Q5VVM6 783 aa20.6■□□□□ 0.89
USB1-215ENST00000569252 NMRK2Q9NPI5 230 aa20.6■□□□□ 0.89
USB1-215ENST00000569252 C4AP0C0L4 1744 aa20.6■□□□□ 0.89
USB1-215ENST00000569252 COL5A3P25940 1745 aaPredicted RBP20.6■□□□□ 0.89
USB1-215ENST00000569252 KCPQ6ZWJ8 1503 aa20.59■□□□□ 0.89
USB1-215ENST00000569252 CT47B1P0C2W7 299 aaPredicted RBP20.59■□□□□ 0.89
USB1-215ENST00000569252 CYP19A1P11511 503 aaPredicted RBP20.59■□□□□ 0.89
USB1-215ENST00000569252 RC3H1Q5TC82 1133 aaKnown RBP20.59■□□□□ 0.89
USB1-215ENST00000569252 NECTIN2Q92692 538 aa20.59■□□□□ 0.89
USB1-215ENST00000569252 ARHGEF1Q92888 912 aaKnown RBP20.59■□□□□ 0.89
USB1-215ENST00000569252 STK31Q9BXU1 1019 aa20.59■□□□□ 0.89
USB1-215ENST00000569252 C10orf71Q711Q0 1435 aa20.59■□□□□ 0.89
USB1-215ENST00000569252 KDM3BQ7LBC6 1761 aa20.59■□□□□ 0.89
USB1-215ENST00000569252 PRAMEF22A3QJZ6 481 aa20.58■□□□□ 0.89
USB1-215ENST00000569252 HTRA3P83110 453 aa20.58■□□□□ 0.89
USB1-215ENST00000569252 TRAPPC3LQ5T215 181 aa20.58■□□□□ 0.89
USB1-215ENST00000569252 ARHGAP27Q6ZUM4 889 aa20.58■□□□□ 0.89
USB1-215ENST00000569252 CCDC87Q9NVE4 849 aa20.58■□□□□ 0.89
USB1-215ENST00000569252 SRP68Q9UHB9 627 aaKnown RBP20.58■□□□□ 0.89
USB1-215ENST00000569252 GYS1P13807 737 aa20.57■□□□□ 0.88
USB1-215ENST00000569252 CANXP27824 592 aaKnown RBP20.57■□□□□ 0.88
USB1-215ENST00000569252 CRKLP46109 303 aaKnown RBP20.57■□□□□ 0.88
USB1-215ENST00000569252 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
USB1-215ENST00000569252 ZNF428Q96B54 188 aa20.57■□□□□ 0.88
USB1-215ENST00000569252 RTCBQ9Y3I0 505 aaKnown RBP20.57■□□□□ 0.88
USB1-215ENST00000569252 VAMP4O75379 141 aa20.56■□□□□ 0.88
USB1-215ENST00000569252 DBF4Q9UBU7 674 aaPredicted RBP20.56■□□□□ 0.88
USB1-215ENST00000569252 BRCA1P38398 1863 aaKnown RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms