RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 NUP133Q8WUM0 1156 aa8.21□□□□□ -1.09
CNOT1-216ENST00000569240 PPFIA4O75335 1185 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 MAP3K9P80192 1104 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC27Q2M243 656 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 TCHPQ9BT92 498 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 WDR97A6NE52 1622 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 APBA1Q02410 837 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 STIM2Q9P246 746 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 PRPHP41219 470 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 GNG11P61952 73 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 CFAP58Q5T655 872 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 KRBA2Q6ZNG9 492 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 CACNA2D3Q8IZS8 1091 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 AFAP1L1Q8TED9 768 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 HMG20BQ9P0W2 317 aa8.21□□□□□ -1.1
CNOT1-216ENST00000569240 FSD2A1L4K1 749 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 PPFIA1Q13136 1202 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CCAR1Q8IX12 1150 aaKnown RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 STX6O43752 255 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CASTP20810 708 aaKnown RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CLNS1AP54105 237 aaKnown RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC129Q6ZRS4 1044 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 TACC1O75410 805 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 HNRNPMP52272 730 aaKnown RBP eCLIP8.2□□□□□ -1.14e-6■■□□□ 11.9
CNOT1-216ENST00000569240 ZSCAN25Q6NSZ9 544 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.2□□□□□ -1.13e-6■□□□□ 10.2
CNOT1-216ENST00000569240 EHBP1L1Q8N3D4 1523 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 FOXD1Q16676 465 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 C8orf34Q49A92 452 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC174Q6PII3 467 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 FSD1Q9BTV5 496 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 RRP7AQ9Y3A4 280 aaKnown RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 CYLC1P35663 651 aaPredicted RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 KRT83P78385 493 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 TRIM7Q9C029 511 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 LARSQ9P2J5 1176 aaKnown RBP8.2□□□□□ -1.1
CNOT1-216ENST00000569240 DAPK1P53355 1430 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 SRGAP3O43295 1099 aa8.2□□□□□ -1.1
CNOT1-216ENST00000569240 GLRX3O76003 335 aaKnown RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 ZSCAN26Q16670 478 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CTAGE9A4FU28 777 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 FKBP5Q13451 457 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC12Q8WUD4 166 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 PPP1R12BO60237 982 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 ZSCAN22P10073 491 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 RLBP1P12271 317 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC6Q16204 474 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 GPR161Q8N6U8 529 aaKnown RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 ANKRD30BQ9BXX2 1392 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 A0A087WUV0 522 aaPredicted RBP8.19□□□□□ -1.1
CNOT1-216ENST00000569240 NAA25Q14CX7 972 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CLUL1Q15846 466 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC110Q8TBZ0 833 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 NSD2O96028 1365 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 WHAMMP3Q1A5X7 153 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 ARMC9Q7Z3E5 817 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 TAX1BP1Q86VP1 789 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC77Q9BR77 488 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 YY1AP1Q9H869 796 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 VEZTQ9HBM0 779 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 NEDD9Q14511 834 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 CCDC186Q7Z3E2 898 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 IQCDQ96DY2 449 aa8.19□□□□□ -1.1
CNOT1-216ENST00000569240 SLC3A2P08195 630 aaKnown RBP8.18□□□□□ -1.1
CNOT1-216ENST00000569240 PLVAPQ9BX97 442 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 ANKRD50Q9ULJ7 1429 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 VAV2P52735 878 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 MAP7Q14244 749 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 GAS2L2Q8NHY3 880 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 PANK2Q9BZ23 570 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 BMP2KQ9NSY1 1161 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-216ENST00000569240 FEZ2Q9UHY8 353 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-216ENST00000569240 GBP1P32455 592 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 DNAI1Q9UI46 699 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 TRIM14Q14142 442 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 ATP5DP30049 168 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 ATP11AP98196 1134 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 GBP7Q8N8V2 638 aaPredicted RBP8.18□□□□□ -1.1
CNOT1-216ENST00000569240 TAOK2Q9UL54 1235 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 EXOSC9Q06265 439 aaKnown RBP8.18□□□□□ -1.1
CNOT1-216ENST00000569240 SLFNL1Q499Z3 407 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 EXOC4Q96A65 974 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 SAMD15Q9P1V8 674 aa8.18□□□□□ -1.1
CNOT1-216ENST00000569240 RARSP54136 660 aaKnown RBP8.17□□□□□ -1.1
CNOT1-216ENST00000569240 TRERF1Q96PN7 1200 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 UTP14AQ9BVJ6 771 aaKnown RBP8.17□□□□□ -1.1
CNOT1-216ENST00000569240 SPECC1Q5M775 1068 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ICE2Q659A1 982 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ARHGAP24Q8N264 748 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 KCNG4Q8TDN1 519 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ANKRD24Q8TF21 1146 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ERBINQ96RT1 1412 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 TWISTNBQ3B726 338 aaPredicted RBP8.17□□□□□ -1.1
CNOT1-216ENST00000569240 RUFY4Q6ZNE9 571 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 TMC6Q7Z403 805 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 CEP57Q86XR8 500 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ZNF853P0CG23 659 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 ALDH3A1P30838 453 aa8.17□□□□□ -1.1
CNOT1-216ENST00000569240 NLRP5P59047 1200 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms